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Tag Content
iUUCD ID IUUC-Ocu-074542
Ensembl Protein ID ENSOCUP00000026824.1
UniProt Accession G1SLC2; G1SLC2_RABIT
Genbank Protein ID ENSOCUP00000003655
Protein Name Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5; eIF-3-epsilon; eIF3 p47
Genbank Nucleotide ID AAGW02007948
Gene Name EIF3F; EIF3S5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000004225.3 ENSOCUT00000033776.1 ENSOCUP00000026824.1
ENSOCUG00000004225.3 ENSOCUT00000004227.2 ENSOCUP00000003655.2
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
DUB/JAMM 99.63 9.00e-160 560.00 IUUC-Hsa-046860
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Oryctolagus cuniculus
Functional Description
(View)

Functional Description



     Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression.
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression.
Protein Sequence
(Fasta)
MATPAVSASA PPATPAATPA AAAAPASAPA AAPAPTPAPA PAAAPAAGAA PAAAADPAAA 60
AAAAGTGQTP ASAQAPAQTS APSLPGPALP GPFPGGRVVR LHPVILASIV DSYERRNEGA 120
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Protein Fasta Sequence



>IUUC-Ocu-074542|DUB,JAMM|Oryctolagus cuniculus
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Nucleotide Sequence
(Fasta)
GAACTATTTA CCCCGGGTCT CACTCAGTGC GCGCCGAACC GGAAGCAAAG AGCACAAACT 60
CCGGAAGAAA TTACAAGCAC CAGCACCTAT TAGCGTCCCG AAAAGTGTCA TCAATAACCA 120
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Nucleotide Fasta Sequence



>IUUC-Ocu-074542|DUB,JAMM|Oryctolagus cuniculus
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0597--Phosphoprotein
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001150 Aegilops tauschii 35.48 1.00e-47 183.00
IUUC-Aml-001527 Ailuropoda melanoleuca 99.63 7.00e-162 563.00
IUUC-Atr-002686 Amborella trichopoda 41.06 2.00e-50 192.00
IUUC-Apl-003977 Anas platyrhynchos 91.07 1.00e-122 431.00
IUUC-Aca-004335 Anolis carolinensis 90.74 4.00e-149 520.00
IUUC-Aly-005945 Arabidopsis lyrata 38.78 1.00e-50 192.00
IUUC-Ath-007045 Arabidopsis thaliana 39.16 1.00e-50 192.00
IUUC-Acl-008365 Aspergillus clavatus 34.80 2.00e-41 162.00
IUUC-Afl-008742 Aspergillus flavus 35.53 1.00e-40 159.00
IUUC-Afu-009030 Aspergillus fumigatus 34.43 4.00e-41 161.00
IUUC-Ani-009212 Aspergillus nidulans 35.42 5.00e-42 164.00
IUUC-Ang-009712 Aspergillus niger 34.43 4.00e-40 158.00
IUUC-Aor-009885 Aspergillus oryzae 35.53 4.00e-42 165.00
IUUC-Ate-010315 Aspergillus terreus 35.53 8.00e-40 157.00
IUUC-Ame-010801 Astyanax mexicanus 51.72 7.00e-68 250.00
IUUC-Bgr-011982 Blumeria graminis 35.64 1.00e-40 159.00
IUUC-Bta-012804 Bos taurus 98.58 4.00e-168 583.00
IUUC-Bci-013891 Botrytis cinerea 34.91 2.00e-35 142.00
IUUC-Bdi-014328 Brachypodium distachyon 38.75 3.00e-49 188.00
IUUC-Bol-015446 Brassica oleracea 39.16 1.00e-51 196.00
IUUC-Bra-016862 Brassica rapa 39.54 4.00e-52 198.00
IUUC-Cel-018171 Caenorhabditis elegans 35.19 5.00e-47 181.00
IUUC-Cja-019335 Callithrix jacchus 99.63 1.00e-164 572.00
IUUC-Cfa-020138 Canis familiaris 99.25 2.00e-161 561.00
IUUC-Cpo-022109 Cavia porcellus 87.27 3.00e-136 478.00
IUUC-Cre-022664 Chlamydomonas reinhardtii 38.43 3.00e-58 218.00
IUUC-Csa-023994 Chlorocebus sabaeus 99.63 1.00e-164 572.00
IUUC-Cho-024351 Choloepus hoffmanni 76.47 1.00e-114 405.00
IUUC-Cin-025801 Ciona intestinalis 56.51 1.00e-88 319.00
IUUC-Csv-025805 Ciona savignyi 55.76 6.00e-87 313.00
IUUC-Cgl-026643 Colletotrichum gloeosporioides 31.87 1.00e-35 143.00
IUUC-Cne-026868 Cryptococcus neoformans 29.15 1.00e-28 119.00
IUUC-Cme-027328 Cyanidioschyzon merolae 26.03 2.00e-22 99.40
IUUC-Dre-028085 Danio rerio 80.30 5.00e-130 456.00
IUUC-Dno-030099 Dasypus novemcinctus 99.25 2.00e-161 561.00
IUUC-Dor-030324 Dipodomys ordii 90.67 4.00e-140 490.00
IUUC-Dse-031314 Dothistroma septosporum 36.26 8.00e-45 174.00
IUUC-Dme-031926 Drosophila melanogaster 49.26 3.00e-77 281.00
IUUC-Ete-032569 Echinops telfairi 92.81 2.00e-152 530.00
IUUC-Eca-033502 Equus caballus 94.31 5.00e-155 540.00
IUUC-Eeu-034883 Erinaceus europaeus 82.16 5.00e-83 299.00
IUUC-Fca-035873 Felis catus 99.63 7.00e-162 563.00
IUUC-Fal-036921 Ficedula albicollis 92.22 3.00e-150 523.00
IUUC-Fox-037765 Fusarium oxysporum 32.73 3.00e-30 125.00
IUUC-Fso-038240 Fusarium solani 33.09 1.00e-32 133.00
IUUC-Gmo-038864 Gadus morhua 78.44 9.00e-130 455.00
IUUC-Ggr-039862 Gaeumannomyces graminis 31.88 4.00e-30 125.00
IUUC-Gga-040952 Gallus gallus 92.28 2.00e-151 527.00
IUUC-Gac-041677 Gasterosteus aculeatus 79.55 4.00e-130 457.00
IUUC-Gma-043061 Glycine max 41.06 4.00e-50 191.00
IUUC-Ggo-045591 Gorilla gorilla 99.63 4.00e-165 573.00
IUUC-Hsa-046860 Homo sapiens 99.63 1.00e-164 572.00
IUUC-Hvu-047410 Hordeum vulgare 31.08 8.00e-21 92.40
IUUC-Itr-048211 Ictidomys tridecemlineatus 99.25 2.00e-161 561.00
IUUC-Lch-049410 Latimeria chalumnae 74.27 1.00e-87 315.00
IUUC-Lpe-051102 Leersia perrieri 40.00 7.00e-48 183.00
IUUC-Loc-052016 Lepisosteus oculatus 69.20 8.00e-115 406.00
IUUC-Lma-053157 Leptosphaeria maculans 34.26 2.00e-43 169.00
IUUC-Laf-054568 Loxodonta africana 98.90 3.00e-164 570.00
IUUC-Mcc-054613 Macaca mulatta 99.63 8.00e-165 572.00
IUUC-Meu-056832 Macropus eugenii 73.33 1.00e-83 301.00
IUUC-Mor-057104 Magnaporthe oryzae 31.32 2.00e-30 125.00
IUUC-Mtr-058445 Medicago truncatula 40.68 8.00e-59 220.00
IUUC-Mla-059038 Melampsora laricipopulina 31.12 1.00e-32 133.00
IUUC-Mga-059548 Meleagris gallopavo 91.95 5.00e-130 456.00
IUUC-Mvi-060520 Microbotryum violaceum 27.95 2.00e-22 99.80
IUUC-Mdo-062376 Monodelphis domestica 94.78 6.00e-152 530.00
IUUC-Mmu-063254 Mus musculus 98.88 1.00e-160 558.00
IUUC-Mac-065635 Musa acuminata 41.09 7.00e-53 200.00
IUUC-Mpu-066314 Mustela putorius furo 99.63 8.00e-162 562.00
IUUC-Mlu-067512 Myotis lucifugus 97.76 2.00e-156 544.00
IUUC-Nfi-068262 Neosartorya fischeri 34.43 4.00e-41 161.00
IUUC-Ncr-068872 Neurospora crassa 32.36 5.00e-33 135.00
IUUC-Nle-070118 Nomascus leucogenys 99.63 5.00e-162 563.00
IUUC-Opr-071228 Ochotona princeps 100.00 1.00e-142 498.00
IUUC-Ont-072600 Oreochromis niloticus 80.67 8.00e-133 465.00
IUUC-Oan-073584 Ornithorhynchus anatinus 94.07 4.00e-134 469.00
IUUC-Oba-075923 Oryza barthii 38.99 6.00e-51 194.00
IUUC-Obr-076313 Oryza brachyantha 40.00 3.00e-49 188.00
IUUC-Ogl-076932 Oryza glaberrima 38.99 6.00e-51 194.00
IUUC-Ogu-078152 Oryza glumaepatula 38.99 6.00e-51 194.00
IUUC-Oin-079528 Oryza indica 38.99 6.00e-51 194.00
IUUC-Olo-080401 Oryza longistaminata 38.99 6.00e-51 194.00
IUUC-Ome-081553 Oryza meridionalis 38.63 2.00e-50 192.00
IUUC-Oni-082090 Oryza nivara 38.99 6.00e-51 194.00
IUUC-Opu-083583 Oryza punctata 40.00 1.00e-48 186.00
IUUC-Oru-084492 Oryza rufipogon 38.99 6.00e-51 194.00
IUUC-Osa-085383 Oryza sativa 38.99 6.00e-51 194.00
IUUC-Ola-086835 Oryzias latipes 79.55 1.00e-129 455.00
IUUC-Olu-087716 Ostreococcus lucimarinus 29.32 2.00e-28 119.00
IUUC-Oga-088886 Otolemur garnettii 98.88 9.00e-161 559.00
IUUC-Oar-090079 Ovis aries 98.58 5.00e-169 586.00
IUUC-Ptr-091457 Pan troglodytes 99.63 1.00e-164 572.00
IUUC-Pan-092317 Papio anubis 99.46 1.00e-108 385.00
IUUC-Psi-093129 Pelodiscus sinensis 85.71 1.00e-130 458.00
IUUC-Pma-094488 Petromyzon marinus 76.58 7.00e-125 439.00
IUUC-Pno-095049 Phaeosphaeria nodorum 34.26 2.00e-43 169.00
IUUC-Ppa-095341 Physcomitrella patens 41.20 1.00e-63 236.00
IUUC-Pfo-096286 Poecilia formosa 76.33 1.00e-130 459.00
IUUC-Pab-097765 Pongo abelii 99.63 1.00e-164 572.00
IUUC-Pop-099131 Populus trichocarpa 40.68 6.00e-55 207.00
IUUC-Pca-100524 Procavia capensis 82.91 1.00e-108 385.00
IUUC-Ppe-101934 Prunus persica 41.83 8.00e-60 223.00
IUUC-Pva-102577 Pteropus vampyrus 98.88 4.00e-161 560.00
IUUC-Pgr-103521 Puccinia graminis 30.19 6.00e-32 131.00
IUUC-Pte-104304 Pyrenophora teres 34.95 5.00e-44 171.00
IUUC-Pyt-104563 Pyrenophora triticirepentis 34.95 4.00e-44 171.00
IUUC-Rno-105717 Rattus norvegicus 99.25 3.00e-161 560.00
IUUC-Sha-107190 Sarcophilus harrisii 95.02 5.00e-148 516.00
IUUC-Sja-107918 Schizosaccharomyces japonicus 35.89 4.00e-46 177.00
IUUC-Spo-108355 Schizosaccharomyces pombe 35.84 4.00e-46 177.00
IUUC-Smo-109374 Selaginella moellendorffii 44.24 2.00e-68 252.00
IUUC-Sit-110119 Setaria italica 39.54 1.00e-49 189.00
IUUC-Sly-111570 Solanum lycopersicum 37.34 3.00e-46 178.00
IUUC-Stu-112308 Solanum tuberosum 39.66 2.00e-52 198.00
IUUC-Sar-113515 Sorex araneus 96.81 2.00e-51 194.00
IUUC-Sbi-114605 Sorghum bicolor 39.16 1.00e-49 190.00
IUUC-Sre-114906 Sporisorium reilianum 39.78 2.00e-52 198.00
IUUC-Tgu-117087 Taeniopygia guttata 90.25 2.00e-127 447.00
IUUC-Tru-117700 Takifugu rubripes 79.18 8.00e-130 456.00
IUUC-Tni-120470 Tetraodon nigroviridis 79.93 9.00e-131 459.00
IUUC-Tca-121109 Theobroma cacao 39.92 1.00e-48 186.00
IUUC-Tre-122095 Trichoderma reesei 33.94 2.00e-32 133.00
IUUC-Tvi-122580 Trichoderma virens 33.57 8.00e-32 130.00
IUUC-Tae-125129 Triticum aestivum 37.59 4.00e-52 197.00
IUUC-Tur-126658 Triticum urartu 36.43 3.00e-43 168.00
IUUC-Tme-127043 Tuber melanosporum 38.87 4.00e-48 184.00
IUUC-Tbe-127927 Tupaia belangeri 99.63 7.00e-162 563.00
IUUC-Ttr-129231 Tursiops truncatus 99.25 2.00e-161 561.00
IUUC-Uma-129578 Ustilago maydis 39.42 2.00e-51 195.00
IUUC-Vda-129730 Verticillium dahliae 32.36 3.00e-37 149.00
IUUC-Vpa-130677 Vicugna pacos 64.03 2.00e-41 162.00
IUUC-Vvi-130968 Vitis vinifera 41.83 1.00e-54 206.00
IUUC-Xtr-132203 Xenopus tropicalis 84.76 4.00e-137 480.00
IUUC-Xma-133972 Xiphophorus maculatus 78.81 4.00e-130 456.00
IUUC-Yli-134553 Yarrowia lipolytica 36.33 2.00e-40 159.00
IUUC-Zma-134941 Zea mays 38.78 4.00e-45 174.00
Created Date 25-Jun-2017

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