iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114455

Ensembl Protein ID

Sb01g038680.1

UniProt Accession

C5WNL1; C5WNL1_SORBI

Genbank Protein ID

EER95047.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G409500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g038680	Sb01g038680.1	Sb01g038680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-24	84.9	54	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ v+ ++f +  +llvsGsdD +i +WD+
   Q: 54   GHEGCVNTVSFnPAgDLLVSGSDDTNIILWDW 85
           8**********95569***************7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAAFEAAGG RKGSCFLEVG RREIGSSFPR ASSRRISGSE HIVLRMSQYG KLRGHEGCVN 60
TVSFNPAGDL LVSGSDDTNI ILWDWLSKTK KLVYPSGHQG NVFHARVMPF TDDSTIVTVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCCGCAAA ATCCCCAACC CCACCCCTCT CTTTTCGCAT TCCACCCCTC ACCATGGCCG 60
CCGCCTTCGA AGCAGCTGGT GGCCGGAAGG GCAGCTGCTT CTTGGAAGTC GGCCGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_01g038680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000985	Aegilops tauschii	64.92	0.00e+00	686.00
IUUC-Aml-001543	Ailuropoda melanoleuca	38.52	3.00e-78	285.00
IUUC-Atr-002578	Amborella trichopoda	56.32	1.00e-154	538.00
IUUC-Aca-004853	Anolis carolinensis	43.09	2.00e-72	266.00
IUUC-Aly-005818	Arabidopsis lyrata	55.67	9.00e-152	529.00
IUUC-Ath-006585	Arabidopsis thaliana	52.55	3.00e-146	511.00
IUUC-Ame-011615	Astyanax mexicanus	38.32	2.00e-86	312.00
IUUC-Bta-013549	Bos taurus	40.10	4.00e-77	281.00
IUUC-Bol-016291	Brassica oleracea	53.57	5.00e-147	513.00
IUUC-Bra-017588	Brassica rapa	53.25	5.00e-143	499.00
IUUC-Cel-018561	Caenorhabditis elegans	32.23	1.00e-21	97.10
IUUC-Cja-018802	Callithrix jacchus	40.41	7.00e-77	280.00
IUUC-Cfa-020535	Canis familiaris	40.36	4.00e-77	281.00
IUUC-Cpo-022216	Cavia porcellus	40.74	4.00e-77	281.00
IUUC-Cre-022883	Chlamydomonas reinhardtii	29.01	1.00e-30	127.00
IUUC-Csa-023095	Chlorocebus sabaeus	40.36	5.00e-77	281.00
IUUC-Cin-025683	Ciona intestinalis	39.65	7.00e-77	280.00
IUUC-Csv-026331	Ciona savignyi	37.66	8.00e-68	249.00
IUUC-Dre-027731	Danio rerio	39.13	3.00e-82	298.00
IUUC-Dno-029192	Dasypus novemcinctus	40.00	1.00e-77	283.00
IUUC-Dme-032115	Drosophila melanogaster	40.91	2.00e-69	256.00
IUUC-Ete-032932	Echinops telfairi	35.71	2.00e-62	233.00
IUUC-Eca-034100	Equus caballus	40.36	3.00e-77	281.00
IUUC-Fca-036138	Felis catus	40.10	1.00e-76	280.00
IUUC-Gmo-038895	Gadus morhua	41.60	4.00e-82	297.00
IUUC-Gga-040447	Gallus gallus	41.12	4.00e-72	265.00
IUUC-Gac-041796	Gasterosteus aculeatus	40.00	3.00e-84	305.00
IUUC-Gma-044200	Glycine max	53.29	3.00e-144	504.00
IUUC-Ggo-045613	Gorilla gorilla	40.36	3.00e-77	281.00
IUUC-Hsa-046377	Homo sapiens	40.36	5.00e-77	281.00
IUUC-Hvu-047687	Hordeum vulgare	75.10	0.00e+00	723.00
IUUC-Itr-048849	Ictidomys tridecemlineatus	39.50	5.00e-75	274.00
IUUC-Lch-050050	Latimeria chalumnae	33.42	7.00e-50	191.00
IUUC-Lpe-051191	Leersia perrieri	77.82	0.00e+00	736.00
IUUC-Lma-053032	Leptosphaeria maculans	50.53	1.00e-23	104.00
IUUC-Laf-053407	Loxodonta africana	40.51	1.00e-77	283.00
IUUC-Mcc-055604	Macaca mulatta	40.36	5.00e-77	281.00
IUUC-Meu-056043	Macropus eugenii	39.19	8.00e-70	257.00
IUUC-Mtr-057813	Medicago truncatula	52.64	3.00e-145	507.00
IUUC-Mmr-061338	Microcebus murinus	40.10	6.00e-77	281.00
IUUC-Mdo-062689	Monodelphis domestica	40.10	9.00e-70	256.00
IUUC-Mmu-063993	Mus musculus	40.36	7.00e-78	283.00
IUUC-Mac-064558	Musa acuminata	60.97	5.00e-174	603.00
IUUC-Mpu-066622	Mustela putorius furo	40.36	6.00e-77	280.00
IUUC-Mlu-067235	Myotis lucifugus	41.00	3.00e-77	282.00
IUUC-Nle-069048	Nomascus leucogenys	40.81	3.00e-77	281.00
IUUC-Opr-070489	Ochotona princeps	30.97	6.00e-38	151.00
IUUC-Ont-072060	Oreochromis niloticus	41.60	7.00e-85	307.00
IUUC-Oan-073632	Ornithorhynchus anatinus	24.09	1.00e-15	77.00
IUUC-Ocu-074684	Oryctolagus cuniculus	40.10	6.00e-77	280.00
IUUC-Oba-075746	Oryza barthii	76.86	0.00e+00	739.00
IUUC-Obr-076629	Oryza brachyantha	79.35	0.00e+00	785.00
IUUC-Ogl-077243	Oryza glaberrima	78.91	0.00e+00	770.00
IUUC-Ogu-078029	Oryza glumaepatula	77.36	0.00e+00	746.00
IUUC-Olo-080308	Oryza longistaminata	76.39	0.00e+00	706.00
IUUC-Ome-081126	Oryza meridionalis	78.03	0.00e+00	707.00
IUUC-Oni-083114	Oryza nivara	78.24	0.00e+00	753.00
IUUC-Opu-083288	Oryza punctata	79.74	0.00e+00	733.00
IUUC-Oru-084724	Oryza rufipogon	77.80	0.00e+00	750.00
IUUC-Osa-085895	Oryza sativa	78.91	0.00e+00	770.00
IUUC-Oga-088849	Otolemur garnettii	40.36	3.00e-77	281.00
IUUC-Oar-089474	Ovis aries	38.07	5.00e-67	248.00
IUUC-Ptr-091235	Pan troglodytes	40.36	3.00e-77	282.00
IUUC-Pan-092895	Papio anubis	40.36	5.00e-77	281.00
IUUC-Psi-093973	Pelodiscus sinensis	40.30	7.00e-77	281.00
IUUC-Pno-095149	Phaeosphaeria nodorum	45.24	8.00e-17	82.00
IUUC-Ppa-095529	Physcomitrella patens	54.11	8.00e-130	456.00
IUUC-Pfo-097275	Poecilia formosa	41.35	1.00e-84	306.00
IUUC-Pab-098299	Pongo abelii	40.36	4.00e-77	281.00
IUUC-Pca-100729	Procavia capensis	37.40	3.00e-65	242.00
IUUC-Pva-103030	Pteropus vampyrus	40.36	4.00e-77	281.00
IUUC-Pgr-103528	Puccinia graminis	23.60	9.00e-17	80.90
IUUC-Pte-104187	Pyrenophora teres	55.56	4.00e-23	103.00
IUUC-Rno-105416	Rattus norvegicus	40.10	5.00e-77	281.00
IUUC-Sha-106545	Sarcophilus harrisii	40.05	2.00e-69	256.00
IUUC-Smo-109658	Selaginella moellendorffii	47.87	1.00e-124	439.00
IUUC-Sit-110823	Setaria italica	88.82	0.00e+00	877.00
IUUC-Sly-111605	Solanum lycopersicum	59.12	3.00e-150	524.00
IUUC-Stu-111978	Solanum tuberosum	60.88	2.00e-161	561.00
IUUC-Ssc-115612	Sus scrofa	40.10	5.00e-77	281.00
IUUC-Tru-117708	Takifugu rubripes	40.48	3.00e-85	308.00
IUUC-Tsy-119579	Tarsius syrichta	35.53	4.00e-61	228.00
IUUC-Tni-120739	Tetraodon nigroviridis	40.24	3.00e-84	305.00
IUUC-Tae-125798	Triticum aestivum	72.18	0.00e+00	708.00
IUUC-Tur-126381	Triticum urartu	67.21	2.00e-177	613.00
IUUC-Tbe-128115	Tupaia belangeri	39.24	3.00e-68	252.00
IUUC-Ttr-128231	Tursiops truncatus	36.29	3.00e-65	241.00
IUUC-Vvi-131034	Vitis vinifera	54.11	1.00e-153	535.00
IUUC-Xtr-131860	Xenopus tropicalis	37.01	6.00e-62	231.00
IUUC-Xma-133371	Xiphophorus maculatus	39.30	2.00e-86	312.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence