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Tag Content
UUCD2 ID IUUC-Gma-044215
UUCD1 version UUC-GlM-01499
Ensembl Protein ID GLYMA16G00541.1
UniProt Accession K7MED3; K7MED3_SOYBN
Genbank Protein ID KRH06084.1
Protein Name Ribosome biogenesis protein BOP1 homolog
Genbank Nucleotide ID CM000849
Gene Name LOC100818497; GLYMA_16G003700
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA16G00541 GLYMA16G00541.1 GLYMA16G00541.1
GLYMA16G00541 GLYMA16G00541.2 GLYMA16G00541.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-14 54.8 383 421
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+d vt++++  s+  ++sGs+Dgt+++W++ tg++l+
   Q: 383  GHEDAVTSISLeaSGQWMASGSRDGTVRIWEVETGRCLR 421
           8***********887889*******************96 PP
   
Organism Glycine max
Functional Description
(View)

Functional Description


     Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
 Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
Protein Sequence
(Fasta)
MKAKKHAHAE EEGVAPLPSP TLSDSDSDYE DSSADDHHES SVSLDSQSQS ELEDASPENG 60
SSGVVESAEN ESSQYEDTVN EEDGGSESSD LHLEGAESDS SEDEVAPRNT VGDVPLKWYE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Gma-044215|E3,WD_repeat|Glycine max
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGAATTTAAA CAGAGAAATA GATATTGATG ATTGGGCCTT AGCAAAGAAG CCGAAAGTGT 60
GGGTAAAACT AAAACCCTTT ACCTCCTCCA AACAAAACCC TAACTTGTGA TTTTGAAGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Gma-044215|E3,WD_repeat|Glycine max
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08145--BOP1NT
PF00400--WD40
SMART

SM01035--BOP1NT
SM00320--WD40
Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG gmx:100818497
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001158 Aegilops tauschii 59.73 0.00e+00 694.00
IUUC-Aml-001507 Ailuropoda melanoleuca 42.56 2.00e-137 483.00
IUUC-Apl-003545 Anas platyrhynchos 42.41 3.00e-119 422.00
IUUC-Ago-007958 Ashbya gossypii 39.82 1.00e-138 487.00
IUUC-Acl-008344 Aspergillus clavatus 42.86 2.00e-126 446.00
IUUC-Afl-008616 Aspergillus flavus 41.46 2.00e-129 456.00
IUUC-Ani-009365 Aspergillus nidulans 41.73 2.00e-128 453.00
IUUC-Ang-009796 Aspergillus niger 39.83 2.00e-125 442.00
IUUC-Aor-010015 Aspergillus oryzae 41.46 3.00e-129 456.00
IUUC-Ate-010537 Aspergillus terreus 41.55 2.00e-132 466.00
IUUC-Bgr-012286 Blumeria graminis 44.01 1.00e-141 496.00
IUUC-Bci-013820 Botrytis cinerea 40.68 9.00e-132 464.00
IUUC-Bdi-014477 Brachypodium distachyon 65.96 0.00e+00 838.00
IUUC-Bol-016099 Brassica oleracea 72.52 0.00e+00 927.00
IUUC-Bra-017174 Brassica rapa 72.40 0.00e+00 935.00
IUUC-Cel-018201 Caenorhabditis elegans 39.07 2.00e-117 416.00
IUUC-Cja-019009 Callithrix jacchus 40.81 1.00e-126 447.00
IUUC-Cfa-020173 Canis familiaris 41.95 6.00e-137 481.00
IUUC-Cpo-021796 Cavia porcellus 44.57 1.00e-144 507.00
IUUC-Csa-023440 Chlorocebus sabaeus 44.77 4.00e-152 531.00
IUUC-Cin-025782 Ciona intestinalis 42.77 1.00e-141 497.00
IUUC-Csv-026352 Ciona savignyi 41.39 1.00e-136 479.00
IUUC-Cne-027004 Cryptococcus neoformans 42.99 2.00e-146 513.00
IUUC-Cme-027242 Cyanidioschyzon merolae 35.36 1.00e-102 367.00
IUUC-Dre-028658 Danio rerio 46.72 4.00e-153 535.00
IUUC-Dno-028883 Dasypus novemcinctus 45.89 2.00e-150 526.00
IUUC-Dse-031443 Dothistroma septosporum 39.31 3.00e-130 459.00
IUUC-Eca-033677 Equus caballus 45.89 9.00e-149 520.00
IUUC-Eeu-035310 Erinaceus europaeus 43.14 3.00e-109 389.00
IUUC-Fca-035888 Felis catus 44.82 1.00e-146 513.00
IUUC-Fal-037438 Ficedula albicollis 44.99 4.00e-123 435.00
IUUC-Gmo-039114 Gadus morhua 42.69 1.00e-129 457.00
IUUC-Gga-040631 Gallus gallus 46.59 3.00e-89 321.00
IUUC-Gac-042582 Gasterosteus aculeatus 44.90 3.00e-139 489.00
IUUC-Ggo-045587 Gorilla gorilla 44.61 3.00e-151 528.00
IUUC-Hsa-046319 Homo sapiens 44.61 7.00e-152 531.00
IUUC-Hvu-047526 Hordeum vulgare 64.72 0.00e+00 820.00
IUUC-Kpa-049221 Komagataella pastoris 39.33 8.00e-132 464.00
IUUC-Lch-049640 Latimeria chalumnae 46.02 2.00e-157 549.00
IUUC-Lpe-051135 Leersia perrieri 61.27 0.00e+00 748.00
IUUC-Loc-051930 Lepisosteus oculatus 46.68 2.00e-156 545.00
IUUC-Lma-053290 Leptosphaeria maculans 41.36 1.00e-133 470.00
IUUC-Laf-053903 Loxodonta africana 43.02 1.00e-129 457.00
IUUC-Mcc-055471 Macaca mulatta 44.61 6.00e-152 531.00
IUUC-Meu-056190 Macropus eugenii 45.73 3.00e-146 512.00
IUUC-Mpo-057475 Magnaporthe poae 39.83 9.00e-138 484.00
IUUC-Mtr-058689 Medicago truncatula 80.83 0.00e+00 1065.00
IUUC-Mga-059645 Meleagris gallopavo 42.28 2.00e-51 195.00
IUUC-Mvi-060485 Microbotryum violaceum 42.33 6.00e-128 452.00
IUUC-Mdo-062973 Monodelphis domestica 45.25 1.00e-153 537.00
IUUC-Mmu-064180 Mus musculus 42.88 6.00e-148 518.00
IUUC-Mpu-066406 Mustela putorius furo 45.09 2.00e-151 529.00
IUUC-Nfi-068516 Neosartorya fischeri 41.02 1.00e-113 404.00
IUUC-Ncr-068767 Neurospora crassa 42.75 4.00e-129 455.00
IUUC-Opr-071084 Ochotona princeps 43.12 2.00e-59 223.00
IUUC-Ont-071614 Oreochromis niloticus 45.34 1.00e-149 523.00
IUUC-Oba-075980 Oryza barthii 61.11 0.00e+00 748.00
IUUC-Obr-076799 Oryza brachyantha 65.14 0.00e+00 825.00
IUUC-Ogl-077134 Oryza glaberrima 64.98 0.00e+00 806.00
IUUC-Ogu-078655 Oryza glumaepatula 62.19 0.00e+00 781.00
IUUC-Oin-079654 Oryza indica 64.98 0.00e+00 804.00
IUUC-Olo-080706 Oryza longistaminata 61.27 0.00e+00 753.00
IUUC-Ome-081716 Oryza meridionalis 50.33 5.00e-163 568.00
IUUC-Oni-082508 Oryza nivara 61.21 0.00e+00 759.00
IUUC-Opu-083707 Oryza punctata 61.44 0.00e+00 752.00
IUUC-Oru-084453 Oryza rufipogon 61.27 0.00e+00 753.00
IUUC-Osa-085811 Oryza sativa 64.81 0.00e+00 805.00
IUUC-Ola-087361 Oryzias latipes 45.58 8.00e-151 527.00
IUUC-Oga-088015 Otolemur garnettii 45.57 8.00e-148 517.00
IUUC-Ptr-090631 Pan troglodytes 38.59 5.00e-52 198.00
IUUC-Pan-092306 Papio anubis 44.86 1.00e-151 530.00
IUUC-Pma-094622 Petromyzon marinus 44.50 1.00e-149 523.00
IUUC-Pno-094794 Phaeosphaeria nodorum 39.81 4.00e-123 435.00
IUUC-Pfo-096682 Poecilia formosa 45.06 3.00e-149 522.00
IUUC-Pab-097939 Pongo abelii 43.92 7.00e-137 480.00
IUUC-Pop-099043 Populus trichocarpa 79.72 0.00e+00 937.00
IUUC-Pca-100333 Procavia capensis 45.71 3.00e-150 525.00
IUUC-Ppe-102078 Prunus persica 74.58 0.00e+00 931.00
IUUC-Ptt-103929 Puccinia triticina 42.31 4.00e-121 429.00
IUUC-Pte-104029 Pyrenophora teres 42.95 1.00e-143 504.00
IUUC-Pyt-104446 Pyrenophora triticirepentis 42.79 6.00e-143 501.00
IUUC-Rno-105248 Rattus norvegicus 44.73 2.00e-147 516.00
IUUC-Sha-106519 Sarcophilus harrisii 46.03 1.00e-154 540.00
IUUC-Sja-107908 Schizosaccharomyces japonicus 40.94 3.00e-131 462.00
IUUC-Smo-109604 Selaginella moellendorffii 59.31 0.00e+00 716.00
IUUC-Sit-110551 Setaria italica 66.01 0.00e+00 823.00
IUUC-Sbi-113945 Sorghum bicolor 66.78 0.00e+00 851.00
IUUC-Sre-115188 Sporisorium reilianum 40.03 3.00e-130 459.00
IUUC-Ssc-115352 Sus scrofa 45.38 2.00e-151 529.00
IUUC-Tru-117685 Takifugu rubripes 45.47 6.00e-152 531.00
IUUC-Tni-119982 Tetraodon nigroviridis 45.97 3.00e-145 509.00
IUUC-Tca-121664 Theobroma cacao 75.33 0.00e+00 1017.00
IUUC-Tre-122229 Trichoderma reesei 40.83 3.00e-127 449.00
IUUC-Tvi-122576 Trichoderma virens 40.75 1.00e-128 454.00
IUUC-Tae-124110 Triticum aestivum 65.96 0.00e+00 793.00
IUUC-Tur-126781 Triticum urartu 60.23 0.00e+00 684.00
IUUC-Tme-127080 Tuber melanosporum 46.43 6.00e-158 551.00
IUUC-Ttr-128514 Tursiops truncatus 44.06 2.00e-94 340.00
IUUC-Vda-129715 Verticillium dahliae 40.95 3.00e-140 492.00
IUUC-Xma-133883 Xiphophorus maculatus 45.30 2.00e-143 502.00
IUUC-Yli-134438 Yarrowia lipolytica 41.50 4.00e-129 455.00
Created Date 25-Jun-2017

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