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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-064305
Ensembl Protein ID ENSMUSP00000039010.7
UniProt Accession Q9CX97; A2RS10; WDR55_MOUSE
Genbank Protein ID BAB31225.2; BAC36082.1; BAE26896.1; EDK97176.1; AAI31933.1; AAI31935.1
Protein Name WD repeat-containing protein 55
Genbank Nucleotide ID AK018469; AK075958; AK146093; CH466557; BC131932; BC131934
Gene Name Wdr55
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000042660.7 ENSMUST00000049323.7 ENSMUSP00000039010.7
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
microRNATRANSFACRepTarmiRNAMap
RAID2
Protein-protein Interaction
IIDMentha
Post-translational Modifications (PTMs)
dbPAFPhosphositePlusdbPTMPHOSIDA
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.90e-24 84.2 127 158
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H+++++++ + +++ lv+G d g i++WD r+
   Q: 127  HSAPINSVLLvDENALVTGDDTGGIRLWDQRK 158
           9*******775559***************765 PP
   
Organism Mus musculus
Functional Description
(View)

Functional Description


     Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis.
 Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis.
Protein Sequence
(Fasta)
MDPTCEESPA EDSNNEEEDL DSTKAAPRIR DTPEDIVLEA PASGLAFHPT RDLLAAGDVD 60
GDVFVFAYSC QEGETKELWS SGHHLKSCRA VVFSEDGQKL VTVSKDKAIH ILDVEQGQLE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-064305|E3,WD_repeat|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGGCCACGCC CCTGTCCATG AAGTTGGTCC CAAGCGCGCG TGGATCCTAT GGACCCCACG 60
TGTGAAGAGA GTCCTGCAGA GGACTCAAAC AATGAAGAGG AAGACCTTGA CTCCACGAAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-064305|E3,WD_repeat|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing
KEGG mmu:67936
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000562 Aegilops tauschii 36.64 2.00e-47 182.00
IUUC-Aml-001768 Ailuropoda melanoleuca 90.93 0.00e+00 714.00
IUUC-Atr-002764 Amborella trichopoda 34.87 2.00e-21 95.50
IUUC-Apl-003880 Anas platyrhynchos 65.35 8.00e-117 414.00
IUUC-Aca-005060 Anolis carolinensis 67.49 3.00e-149 522.00
IUUC-Aly-006484 Arabidopsis lyrata 36.49 8.00e-49 187.00
IUUC-Ath-006652 Arabidopsis thaliana 38.64 3.00e-57 215.00
IUUC-Bta-013497 Bos taurus 89.49 0.00e+00 681.00
IUUC-Bdi-014378 Brachypodium distachyon 37.83 2.00e-55 209.00
IUUC-Bol-016352 Brassica oleracea 38.98 3.00e-59 221.00
IUUC-Bra-017103 Brassica rapa 38.98 1.00e-59 223.00
IUUC-Cel-018192 Caenorhabditis elegans 23.81 9.00e-16 77.80
IUUC-Cja-018792 Callithrix jacchus 89.74 0.00e+00 659.00
IUUC-Cfa-020739 Canis familiaris 90.88 0.00e+00 692.00
IUUC-Cpo-022331 Cavia porcellus 90.67 0.00e+00 686.00
IUUC-Cre-022921 Chlamydomonas reinhardtii 39.89 7.00e-37 146.00
IUUC-Csa-023414 Chlorocebus sabaeus 88.80 0.00e+00 691.00
IUUC-Cho-024600 Choloepus hoffmanni 89.02 1.00e-178 618.00
IUUC-Cin-025565 Ciona intestinalis 38.69 1.00e-62 233.00
IUUC-Csv-026294 Ciona savignyi 35.81 7.00e-62 231.00
IUUC-Cne-026979 Cryptococcus neoformans 33.68 2.00e-40 159.00
IUUC-Cme-027192 Cyanidioschyzon merolae 26.13 1.00e-21 97.80
IUUC-Dre-028492 Danio rerio 63.19 1.00e-128 452.00
IUUC-Dno-030050 Dasypus novemcinctus 85.29 0.00e+00 630.00
IUUC-Dor-030386 Dipodomys ordii 79.40 3.00e-166 577.00
IUUC-Dme-032012 Drosophila melanogaster 33.14 8.00e-58 218.00
IUUC-Ete-032491 Echinops telfairi 87.57 0.00e+00 664.00
IUUC-Eca-033583 Equus caballus 91.48 0.00e+00 692.00
IUUC-Eeu-034976 Erinaceus europaeus 93.11 7.00e-172 596.00
IUUC-Fca-036417 Felis catus 91.53 0.00e+00 671.00
IUUC-Gmo-039505 Gadus morhua 66.17 4.00e-140 490.00
IUUC-Ggr-039978 Gaeumannomyces graminis 24.76 5.00e-13 68.90
IUUC-Gga-040732 Gallus gallus 68.64 2.00e-143 501.00
IUUC-Gac-041313 Gasterosteus aculeatus 63.99 4.00e-134 471.00
IUUC-Gma-044122 Glycine max 40.00 6.00e-58 218.00
IUUC-Ggo-044748 Gorilla gorilla 89.07 0.00e+00 692.00
IUUC-Hsa-046943 Homo sapiens 89.07 0.00e+00 692.00
IUUC-Hvu-047659 Hordeum vulgare 36.84 1.00e-53 203.00
IUUC-Itr-048110 Ictidomys tridecemlineatus 89.56 0.00e+00 664.00
IUUC-Lch-050331 Latimeria chalumnae 59.77 2.00e-112 399.00
IUUC-Lpe-051193 Leersia perrieri 39.44 3.00e-59 222.00
IUUC-Loc-051946 Lepisosteus oculatus 66.86 2.00e-134 473.00
IUUC-Lma-052960 Leptosphaeria maculans 22.36 7.00e-11 61.60
IUUC-Laf-054035 Loxodonta africana 88.43 0.00e+00 661.00
IUUC-Mcc-055285 Macaca mulatta 89.20 9.00e-92 328.00
IUUC-Meu-056596 Macropus eugenii 85.38 2.00e-173 601.00
IUUC-Mor-056995 Magnaporthe oryzae 24.45 7.00e-14 71.60
IUUC-Mtr-058637 Medicago truncatula 39.73 5.00e-57 215.00
IUUC-Mga-059839 Meleagris gallopavo 69.74 2.00e-94 340.00
IUUC-Mdo-062868 Monodelphis domestica 85.14 3.00e-176 612.00
IUUC-Mac-065041 Musa acuminata 38.03 4.00e-56 211.00
IUUC-Mpu-066779 Mustela putorius furo 90.13 0.00e+00 663.00
IUUC-Mlu-067223 Myotis lucifugus 92.26 0.00e+00 649.00
IUUC-Ncr-068919 Neurospora crassa 25.32 3.00e-08 53.10
IUUC-Nle-069852 Nomascus leucogenys 91.67 0.00e+00 667.00
IUUC-Ont-072452 Oreochromis niloticus 66.27 2.00e-139 488.00
IUUC-Oan-073163 Ornithorhynchus anatinus 82.07 3.00e-66 243.00
IUUC-Ocu-074628 Oryctolagus cuniculus 91.48 0.00e+00 689.00
IUUC-Oba-075868 Oryza barthii 38.38 5.00e-56 211.00
IUUC-Obr-076768 Oryza brachyantha 38.73 2.00e-57 216.00
IUUC-Ogl-077424 Oryza glaberrima 39.08 1.00e-58 220.00
IUUC-Ogu-078847 Oryza glumaepatula 38.73 2.00e-56 213.00
IUUC-Oin-079495 Oryza indica 39.08 1.00e-58 220.00
IUUC-Olo-080268 Oryza longistaminata 38.73 2.00e-56 212.00
IUUC-Ome-081709 Oryza meridionalis 38.46 5.00e-50 191.00
IUUC-Oni-082749 Oryza nivara 39.08 1.00e-58 220.00
IUUC-Opu-084023 Oryza punctata 32.75 9.00e-40 157.00
IUUC-Oru-084764 Oryza rufipogon 38.73 2.00e-56 213.00
IUUC-Osa-086009 Oryza sativa 39.08 1.00e-58 219.00
IUUC-Ola-086463 Oryzias latipes 59.74 8.00e-130 456.00
IUUC-Olu-087897 Ostreococcus lucimarinus 31.23 3.00e-43 169.00
IUUC-Oga-089114 Otolemur garnettii 88.44 0.00e+00 675.00
IUUC-Ptr-090556 Pan troglodytes 89.33 0.00e+00 694.00
IUUC-Pan-092828 Papio anubis 88.53 0.00e+00 689.00
IUUC-Psi-093609 Pelodiscus sinensis 71.84 3.00e-119 422.00
IUUC-Pma-094413 Petromyzon marinus 54.60 1.00e-102 366.00
IUUC-Pno-094833 Phaeosphaeria nodorum 21.86 3.00e-07 50.10
IUUC-Ppa-095422 Physcomitrella patens 41.14 4.00e-66 244.00
IUUC-Pfo-096389 Poecilia formosa 65.38 3.00e-132 465.00
IUUC-Pab-098095 Pongo abelii 89.33 0.00e+00 691.00
IUUC-Pop-099612 Populus trichocarpa 37.89 2.00e-53 202.00
IUUC-Pca-100408 Procavia capensis 88.71 0.00e+00 664.00
IUUC-Ppe-101931 Prunus persica 35.31 4.00e-54 205.00
IUUC-Pva-102549 Pteropus vampyrus 89.01 0.00e+00 669.00
IUUC-Rno-105079 Rattus norvegicus 98.08 0.00e+00 744.00
IUUC-Sha-107299 Sarcophilus harrisii 85.92 2.00e-164 572.00
IUUC-Sja-107829 Schizosaccharomyces japonicus 29.11 1.00e-21 97.10
IUUC-Spo-108122 Schizosaccharomyces pombe 31.23 2.00e-29 123.00
IUUC-Smo-109613 Selaginella moellendorffii 39.86 2.00e-51 196.00
IUUC-Sit-110263 Setaria italica 37.68 9.00e-56 210.00
IUUC-Sly-110988 Solanum lycopersicum 37.46 5.00e-53 201.00
IUUC-Stu-112713 Solanum tuberosum 37.81 1.00e-53 203.00
IUUC-Sbi-114617 Sorghum bicolor 36.62 1.00e-53 203.00
IUUC-Sre-115136 Sporisorium reilianum 31.25 6.00e-13 68.90
IUUC-Ssc-116268 Sus scrofa 89.54 0.00e+00 692.00
IUUC-Tgu-116720 Taeniopygia guttata 59.68 9.00e-87 315.00
IUUC-Tru-117977 Takifugu rubripes 66.37 1.00e-131 462.00
IUUC-Tsy-119121 Tarsius syrichta 88.63 2.00e-110 392.00
IUUC-Tni-119904 Tetraodon nigroviridis 68.45 2.00e-133 468.00
IUUC-Tca-121718 Theobroma cacao 39.93 8.00e-59 220.00
IUUC-Tae-124364 Triticum aestivum 37.54 1.00e-54 206.00
IUUC-Tme-126922 Tuber melanosporum 21.61 2.00e-13 70.90
IUUC-Tbe-127276 Tupaia belangeri 91.25 7.00e-155 539.00
IUUC-Uma-129505 Ustilago maydis 31.71 8.00e-13 68.60
IUUC-Vda-129692 Verticillium dahliae 24.04 2.00e-09 56.60
IUUC-Vpa-130276 Vicugna pacos 91.27 5.00e-133 466.00
IUUC-Vvi-131377 Vitis vinifera 39.22 3.00e-56 214.00
IUUC-Xtr-132529 Xenopus tropicalis 67.70 3.00e-147 515.00
IUUC-Xma-134177 Xiphophorus maculatus 65.09 1.00e-124 439.00
IUUC-Yli-134665 Yarrowia lipolytica 24.20 5.00e-08 52.00
Created Date 25-Jun-2017

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