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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105076
Ensembl Protein ID ENSRNOP00000033699.3
UniProt Accession D4AA13; D4AA13_RAT
Genbank Protein ID ENSRNOP00000033699
Protein Name Dmx-like 1
Genbank Nucleotide ID AABR07032050
Gene Name Dmxl1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000024671.5 ENSRNOT00000031812.5 ENSRNOP00000033699.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.80e-13 49.9 2917 2954
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H ++v ++a  ++  ++v+Gs  g+ik+W+l+t+ ll+
   Q: 2917 HDSPVKAVAIdPTeEYFVTGSAEGNIKIWSLSTFSLLH 2954
           99*********777*******************99887 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MNLHQVLTGA VNPGDHCFSV GSVGEQRFTA YASGCDIVIL GSNFERLQII PGAKHGNIQV 60
GCVDCSMQQG KIAASYGNVI SVFEPVSVPK KRKNLEFYSQ WQKSGQFFLD SIAHNITWDP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105076|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAACCTGC ACCAGGTGCT GACCGGCGCG GTGAACCCCG GCGACCACTG CTTCTCGGTG 60
GGCAGCGTCG GCGAGCAGCG CTTTACGGTG AGGACGGGAG AGGCCGCACG GCCTCCGCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105076|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12234--Rav1p_C
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001368 Ailuropoda melanoleuca 90.17 0.00e+00 5376.00
IUUC-Atr-002754 Amborella trichopoda 23.72 2.00e-18 87.00
IUUC-Apl-003377 Anas platyrhynchos 75.83 0.00e+00 4456.00
IUUC-Aca-004649 Anolis carolinensis 73.07 0.00e+00 4226.00
IUUC-Aly-006404 Arabidopsis lyrata 31.35 1.00e-33 140.00
IUUC-Ath-006612 Arabidopsis thaliana 28.50 2.00e-32 135.00
IUUC-Ang-009742 Aspergillus niger 29.58 1.00e-38 155.00
IUUC-Ame-010919 Astyanax mexicanus 64.71 0.00e+00 3070.00
IUUC-Bta-013088 Bos taurus 89.13 0.00e+00 5376.00
IUUC-Bdi-014471 Brachypodium distachyon 23.64 7.00e-17 82.80
IUUC-Bol-016375 Brassica oleracea 28.72 1.00e-30 130.00
IUUC-Bra-016630 Brassica rapa 28.72 9.00e-31 130.00
IUUC-Cja-019137 Callithrix jacchus 89.45 0.00e+00 5377.00
IUUC-Cfa-021215 Canis familiaris 90.36 0.00e+00 5417.00
IUUC-Cpo-022333 Cavia porcellus 84.13 0.00e+00 4847.00
IUUC-Csa-023151 Chlorocebus sabaeus 89.45 0.00e+00 5403.00
IUUC-Cho-024613 Choloepus hoffmanni 81.30 0.00e+00 1879.00
IUUC-Csv-026055 Ciona savignyi 30.48 0.00e+00 845.00
IUUC-Dno-029601 Dasypus novemcinctus 84.48 0.00e+00 4992.00
IUUC-Dor-030381 Dipodomys ordii 88.62 0.00e+00 1576.00
IUUC-Ete-032464 Echinops telfairi 81.23 0.00e+00 2589.00
IUUC-Eeu-035011 Erinaceus europaeus 81.82 0.00e+00 2454.00
IUUC-Fca-035735 Felis catus 90.28 0.00e+00 5405.00
IUUC-Fal-037367 Ficedula albicollis 75.08 0.00e+00 4344.00
IUUC-Gmo-038687 Gadus morhua 60.22 0.00e+00 2453.00
IUUC-Gac-041986 Gasterosteus aculeatus 60.71 0.00e+00 3398.00
IUUC-Gma-044099 Glycine max 30.64 6.00e-36 147.00
IUUC-Ggo-044811 Gorilla gorilla 90.53 0.00e+00 5454.00
IUUC-Hsa-045950 Homo sapiens 90.04 0.00e+00 5446.00
IUUC-Hvu-047213 Hordeum vulgare 22.35 5.00e-14 71.60
IUUC-Lch-050020 Latimeria chalumnae 70.35 0.00e+00 4035.00
IUUC-Lpe-051382 Leersia perrieri 31.85 2.00e-43 172.00
IUUC-Loc-052909 Lepisosteus oculatus 68.61 0.00e+00 3979.00
IUUC-Laf-054195 Loxodonta africana 89.14 0.00e+00 5334.00
IUUC-Mcc-055646 Macaca mulatta 89.48 0.00e+00 5403.00
IUUC-Meu-056627 Macropus eugenii 75.08 0.00e+00 1419.00
IUUC-Mtr-058725 Medicago truncatula 36.40 4.00e-39 158.00
IUUC-Mga-060009 Meleagris gallopavo 65.91 0.00e+00 3683.00
IUUC-Mmr-060784 Microcebus murinus 88.10 0.00e+00 5222.00
IUUC-Mdo-062914 Monodelphis domestica 82.40 0.00e+00 4957.00
IUUC-Mmu-063808 Mus musculus 95.48 0.00e+00 5618.00
IUUC-Mac-065224 Musa acuminata 33.11 2.00e-30 129.00
IUUC-Mlu-067458 Myotis lucifugus 86.93 0.00e+00 5163.00
IUUC-Nle-070123 Nomascus leucogenys 89.96 0.00e+00 5409.00
IUUC-Ont-071658 Oreochromis niloticus 60.59 0.00e+00 3455.00
IUUC-Ocu-074048 Oryctolagus cuniculus 86.43 0.00e+00 5158.00
IUUC-Oba-075826 Oryza barthii 25.11 6.00e-45 177.00
IUUC-Obr-076145 Oryza brachyantha 27.80 8.00e-42 167.00
IUUC-Ogu-078307 Oryza glumaepatula 24.75 6.00e-44 174.00
IUUC-Oin-080118 Oryza indica 24.96 7.00e-44 174.00
IUUC-Olo-080848 Oryza longistaminata 32.55 2.00e-42 169.00
IUUC-Oni-082792 Oryza nivara 25.25 1.00e-44 176.00
IUUC-Opu-084153 Oryza punctata 26.15 3.00e-41 165.00
IUUC-Oru-084415 Oryza rufipogon 25.04 3.00e-44 174.00
IUUC-Osa-085332 Oryza sativa 23.64 4.00e-20 93.20
IUUC-Ola-086945 Oryzias latipes 59.60 0.00e+00 3353.00
IUUC-Oga-088816 Otolemur garnettii 87.81 0.00e+00 5267.00
IUUC-Oar-089618 Ovis aries 89.19 0.00e+00 5363.00
IUUC-Ptr-090937 Pan troglodytes 89.91 0.00e+00 5425.00
IUUC-Pan-092151 Papio anubis 89.58 0.00e+00 5446.00
IUUC-Psi-093590 Pelodiscus sinensis 77.65 0.00e+00 4597.00
IUUC-Pfo-097445 Poecilia formosa 60.12 0.00e+00 3350.00
IUUC-Pab-098237 Pongo abelii 90.07 0.00e+00 5414.00
IUUC-Pop-098812 Populus trichocarpa 30.72 1.00e-31 133.00
IUUC-Pca-101008 Procavia capensis 84.24 0.00e+00 1598.00
IUUC-Ppe-101610 Prunus persica 29.13 3.00e-36 148.00
IUUC-Pva-102348 Pteropus vampyrus 84.26 0.00e+00 3264.00
IUUC-Sha-106860 Sarcophilus harrisii 83.56 0.00e+00 5024.00
IUUC-Sja-107657 Schizosaccharomyces japonicus 26.45 2.00e-25 112.00
IUUC-Sit-109981 Setaria italica 37.40 7.00e-13 70.10
IUUC-Sly-110968 Solanum lycopersicum 31.59 5.00e-38 154.00
IUUC-Sar-113751 Sorex araneus 84.09 0.00e+00 2420.00
IUUC-Ssc-116371 Sus scrofa 88.80 0.00e+00 5354.00
IUUC-Tgu-117108 Taeniopygia guttata 76.24 0.00e+00 4449.00
IUUC-Tru-117628 Takifugu rubripes 59.90 0.00e+00 3367.00
IUUC-Tsy-118837 Tarsius syrichta 83.77 0.00e+00 3269.00
IUUC-Tca-121789 Theobroma cacao 32.06 2.00e-35 145.00
IUUC-Tae-125726 Triticum aestivum 28.51 1.00e-34 143.00
IUUC-Tbe-127953 Tupaia belangeri 87.77 0.00e+00 2908.00
IUUC-Ttr-128991 Tursiops truncatus 88.81 0.00e+00 4583.00
IUUC-Vpa-130309 Vicugna pacos 88.29 0.00e+00 2993.00
IUUC-Vvi-131584 Vitis vinifera 37.66 4.00e-36 147.00
IUUC-Xtr-132582 Xenopus tropicalis 70.24 0.00e+00 4198.00
IUUC-Xma-134109 Xiphophorus maculatus 59.28 0.00e+00 3366.00
Created Date 25-Jun-2017

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