iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049553

Ensembl Protein ID

ENSLACP00000014117.1

UniProt Accession

H3AWU6; H3AWU6_LATCH

Genbank Protein ID

ENSLACP00000014117

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01061202

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000012425.1	ENSLACT00000014216.1	ENSLACP00000014117.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-18	64.3	125	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H ++v+c+++  +++ l s+sdD+ i  WD+ tg++ 
   Q: 125  HDSRVNCVRWhqNNGCLYSCSDDKHIAEWDVQTGKVK 161
           99*********76699*****************9976 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MAAGSEIAVG SRPACCCAFS PAAADLLALS SAADGRVRFW DTRSGALRQE YVPSSHLSAT 60
CTCLSWGPAG SRAAKEGPQR KKRKSEAVAA TEQLDLLAIG TAVGSILLYS TVKGELQSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCGGTACCA CGTGGCCGCG GCGCGAGACG CCGCCCCCCC TTGCCTTGCT GCTGATGCTG 60
GTGCTGATGA TGATGATGAA GATGAAGATG GCGGCGGGCA GCGAGATCGC GGTGGGGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12

SMART

SM00320--WD40

Gene Ontology

GO:0001525--P:angiogenesis
GO:0048703--P:embryonic viscerocranium morphogenesis
GO:0060218--P:hematopoietic stem cell differentiation
GO:0042254--P:ribosome biogenesis
GO:0001570--P:vasculogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	66.16	0.00e+00	755.00
IUUC-Atr-002533	Amborella trichopoda	24.47	2.00e-24	107.00
IUUC-Apl-003242	Anas platyrhynchos	66.22	0.00e+00	761.00
IUUC-Aca-004607	Anolis carolinensis	62.69	0.00e+00	806.00
IUUC-Aly-006074	Arabidopsis lyrata	25.26	7.00e-18	85.50
IUUC-Ath-007222	Arabidopsis thaliana	26.76	7.00e-18	85.50
IUUC-Ame-011014	Astyanax mexicanus	53.54	3.00e-175	608.00
IUUC-Bta-012605	Bos taurus	65.73	0.00e+00	756.00
IUUC-Bdi-014072	Brachypodium distachyon	23.99	9.00e-23	101.00
IUUC-Bol-016255	Brassica oleracea	23.65	7.00e-27	115.00
IUUC-Bra-017484	Brassica rapa	27.34	3.00e-24	106.00
IUUC-Cja-019620	Callithrix jacchus	66.84	0.00e+00	756.00
IUUC-Cfa-020520	Canis familiaris	64.90	0.00e+00	753.00
IUUC-Cpo-022456	Cavia porcellus	60.78	0.00e+00	743.00
IUUC-Cho-024726	Choloepus hoffmanni	61.41	0.00e+00	726.00
IUUC-Cin-025761	Ciona intestinalis	34.88	2.00e-88	319.00
IUUC-Dre-028051	Danio rerio	54.93	2.00e-180	625.00
IUUC-Dno-030031	Dasypus novemcinctus	62.76	0.00e+00	763.00
IUUC-Dme-031653	Drosophila melanogaster	27.01	2.00e-43	170.00
IUUC-Ete-032863	Echinops telfairi	73.43	2.00e-60	226.00
IUUC-Eca-033243	Equus caballus	66.67	0.00e+00	664.00
IUUC-Eeu-034970	Erinaceus europaeus	57.72	2.00e-157	549.00
IUUC-Fca-036009	Felis catus	65.82	0.00e+00	751.00
IUUC-Fal-037264	Ficedula albicollis	66.61	0.00e+00	746.00
IUUC-Gmo-039124	Gadus morhua	57.07	3.00e-174	604.00
IUUC-Gga-040862	Gallus gallus	64.98	0.00e+00	813.00
IUUC-Gac-041468	Gasterosteus aculeatus	56.25	0.00e+00	639.00
IUUC-Gma-042795	Glycine max	25.32	1.00e-18	87.80
IUUC-Ggo-044432	Gorilla gorilla	62.71	0.00e+00	766.00
IUUC-Hsa-047036	Homo sapiens	62.61	0.00e+00	766.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	65.59	0.00e+00	738.00
IUUC-Laf-053462	Loxodonta africana	65.31	0.00e+00	761.00
IUUC-Mcc-055239	Macaca mulatta	66.50	0.00e+00	750.00
IUUC-Mtr-057977	Medicago truncatula	24.19	2.00e-19	90.90
IUUC-Mga-060079	Meleagris gallopavo	65.77	0.00e+00	756.00
IUUC-Mmr-061472	Microcebus murinus	65.82	0.00e+00	749.00
IUUC-Mdo-061972	Monodelphis domestica	62.89	0.00e+00	801.00
IUUC-Mmu-063354	Mus musculus	64.29	0.00e+00	719.00
IUUC-Mac-065064	Musa acuminata	24.72	5.00e-19	88.60
IUUC-Mpu-066877	Mustela putorius furo	65.51	0.00e+00	749.00
IUUC-Mlu-067476	Myotis lucifugus	63.10	0.00e+00	717.00
IUUC-Nle-069119	Nomascus leucogenys	62.22	0.00e+00	766.00
IUUC-Ont-072093	Oreochromis niloticus	58.54	0.00e+00	687.00
IUUC-Oan-072944	Ornithorhynchus anatinus	64.47	0.00e+00	762.00
IUUC-Ocu-074472	Oryctolagus cuniculus	64.74	0.00e+00	725.00
IUUC-Oba-075009	Oryza barthii	23.31	8.00e-21	95.10
IUUC-Ogl-077189	Oryza glaberrima	23.04	2.00e-20	94.00
IUUC-Oin-079064	Oryza indica	23.31	2.00e-20	93.60
IUUC-Opu-083604	Oryza punctata	25.00	6.00e-22	99.00
IUUC-Oru-084620	Oryza rufipogon	23.31	2.00e-20	94.00
IUUC-Osa-085345	Oryza sativa	23.31	9.00e-21	95.10
IUUC-Ola-086626	Oryzias latipes	56.36	0.00e+00	671.00
IUUC-Oga-087911	Otolemur garnettii	66.50	0.00e+00	748.00
IUUC-Ptr-091603	Pan troglodytes	62.76	0.00e+00	766.00
IUUC-Pan-092569	Papio anubis	66.50	0.00e+00	750.00
IUUC-Pma-094287	Petromyzon marinus	54.00	1.00e-178	619.00
IUUC-Ppa-095327	Physcomitrella patens	25.66	2.00e-33	137.00
IUUC-Pfo-097292	Poecilia formosa	56.01	0.00e+00	632.00
IUUC-Pab-097878	Pongo abelii	62.22	0.00e+00	765.00
IUUC-Pop-099418	Populus trichocarpa	23.25	3.00e-21	96.70
IUUC-Pca-100941	Procavia capensis	61.02	0.00e+00	669.00
IUUC-Ppe-101779	Prunus persica	24.33	2.00e-23	104.00
IUUC-Pva-102493	Pteropus vampyrus	59.52	0.00e+00	663.00
IUUC-Rno-105084	Rattus norvegicus	60.69	0.00e+00	720.00
IUUC-Sha-107486	Sarcophilus harrisii	67.01	0.00e+00	790.00
IUUC-Smo-108825	Selaginella moellendorffii	23.99	4.00e-23	102.00
IUUC-Sit-110825	Setaria italica	25.47	4.00e-21	96.30
IUUC-Sly-111365	Solanum lycopersicum	25.65	4.00e-18	86.30
IUUC-Stu-112812	Solanum tuberosum	23.65	1.00e-17	84.30
IUUC-Sar-113326	Sorex araneus	74.68	3.00e-106	379.00
IUUC-Sbi-114426	Sorghum bicolor	24.93	1.00e-23	104.00
IUUC-Tgu-116726	Taeniopygia guttata	63.46	0.00e+00	798.00
IUUC-Tru-117848	Takifugu rubripes	55.48	0.00e+00	631.00
IUUC-Tsy-119091	Tarsius syrichta	45.71	6.00e-85	308.00
IUUC-Tni-120591	Tetraodon nigroviridis	56.13	0.00e+00	627.00
IUUC-Tca-121576	Theobroma cacao	27.52	2.00e-19	90.90
IUUC-Tae-125105	Triticum aestivum	22.32	7.00e-19	89.00
IUUC-Tbe-127832	Tupaia belangeri	66.04	0.00e+00	685.00
IUUC-Ttr-128812	Tursiops truncatus	63.59	0.00e+00	704.00
IUUC-Xma-133557	Xiphophorus maculatus	56.59	0.00e+00	633.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence