iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049164

Ensembl Protein ID

CAY67357

UniProt Accession

C4QVT4; C4QVT4_KOMPG

Genbank Protein ID

CAY67357.1

Protein Name

U3 small nucleolar RNA-associated protein

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-1_0004

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-1_0004	CAY67357	CAY67357

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.60e-18	61.7	589	626
UBD/Beta-Prp	6.00e-43	145.2	190	415

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+++t+l+f ++ + ++s++ D+ti+ WDl tg ++
   Q: 589  GHTNRITALDFtPNgRWIISSALDNTIRTWDLPTGSCI 626
           8***********77799******************996 PP

UBD/Beta-Prp

   S: 75   tikvwdlstgkcvhtlk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllr 173
            + v++++tgk + t +  +e++++s++  p  d ++ G++d  + ++++++g+ ++++ +g  + v++v++  dg   +v+++ ++ + ++dl+ +  ++
   Q: 190  SLLVFNIKTGKLLFTSSdFNEFNITSIETVPVLDLIAFGTSDGQVVLYNIKKGKRFRKIRTGIISKVTSVSFRTDGaPHFVASFVNGDLFFYDLEHKARVH 290
           56699******99998856899************************************************************************9999999 PP
   S: 174  tl...tgghtdsvyslsfdsngkelvsgsldgtvklwdlq............tgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriWdlrsgdllk 258
            l    +++++ v + +f   ++ +v+ + d+ +k + +             + + +r+  gh+++++ v+f  pn+++++s+s+D+s+ ++ lr++   +
   Q: 291  ILqtvHKEDHGGVSKAAFLNGQPIFVTNGGDNMLKEYAFDpnlsttnssivpAPHYLRSRGGHSAPPTTVQFAdPNSHFMLSASKDRSLWMFSLRKDAQAQ 391
           99777555889999999********************9999998876666666666****************99*********************999888 PP
   S: 259  tlqlhn.................s 265
            ++++                  +
   Q: 392  EMSQRPpkksannkrigvipsmkD 415
           877765555555544444444442 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MPVPVNSSLK KRKSERKAEA VRPSKIFSPF RVLGKVSNEI PFAIGTLGHT FYIVTSVDRA 60
FQIYDANTLH LLFVSNTQTP SKINALAAHF HYVYAAWDNK IGIYRRGILE HVLSCETENF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTGTAC CTGTGAATTC ATCATTGAAG AAAAGAAAAT CGGAGAGGAA AGCTGAGGCT 60
GTGCGGCCAT CTAAGATTTT CTCTCCCTTT CGTGTCTTGG GAAAGGTTTC CAATGAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

ppa:PAS_chr1-1_0004

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	30.72	2.00e-121	427.00
IUUC-Aml-002289	Ailuropoda melanoleuca	33.98	3.00e-123	434.00
IUUC-Atr-002859	Amborella trichopoda	31.80	2.00e-98	351.00
IUUC-Apl-003505	Anas platyrhynchos	32.17	2.00e-101	361.00
IUUC-Aca-004339	Anolis carolinensis	29.72	2.00e-109	387.00
IUUC-Aly-005913	Arabidopsis lyrata	31.37	7.00e-115	406.00
IUUC-Ath-006767	Arabidopsis thaliana	32.45	2.00e-117	414.00
IUUC-Ago-007763	Ashbya gossypii	52.79	0.00e+00	994.00
IUUC-Acl-008275	Aspergillus clavatus	36.52	3.00e-117	413.00
IUUC-Afl-008457	Aspergillus flavus	38.94	2.00e-127	447.00
IUUC-Afu-008914	Aspergillus fumigatus	36.70	1.00e-121	428.00
IUUC-Ani-009225	Aspergillus nidulans	34.60	5.00e-128	449.00
IUUC-Aor-010046	Aspergillus oryzae	36.94	6.00e-157	546.00
IUUC-Ate-010337	Aspergillus terreus	36.91	5.00e-150	523.00
IUUC-Ame-010963	Astyanax mexicanus	29.90	1.00e-105	375.00
IUUC-Bgr-011973	Blumeria graminis	33.95	1.00e-147	514.00
IUUC-Bta-012462	Bos taurus	33.71	8.00e-121	426.00
IUUC-Bci-013940	Botrytis cinerea	35.36	1.00e-169	588.00
IUUC-Bdi-014725	Brachypodium distachyon	31.45	3.00e-118	417.00
IUUC-Bol-016534	Brassica oleracea	30.50	4.00e-109	387.00
IUUC-Bra-016781	Brassica rapa	30.17	5.00e-107	380.00
IUUC-Cel-018581	Caenorhabditis elegans	25.51	6.00e-62	230.00
IUUC-Cja-019675	Callithrix jacchus	33.64	1.00e-131	461.00
IUUC-Cfa-020118	Canis familiaris	33.41	2.00e-120	424.00
IUUC-Cpo-021798	Cavia porcellus	33.79	9.00e-125	439.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	31.23	6.00e-30	123.00
IUUC-Csa-023547	Chlorocebus sabaeus	33.95	2.00e-120	425.00
IUUC-Cho-024518	Choloepus hoffmanni	34.44	1.00e-58	219.00
IUUC-Cin-025339	Ciona intestinalis	29.66	2.00e-109	388.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	34.75	6.00e-153	532.00
IUUC-Cne-026859	Cryptococcus neoformans	34.45	4.00e-136	476.00
IUUC-Cme-027173	Cyanidioschyzon merolae	27.24	5.00e-73	267.00
IUUC-Dre-027733	Danio rerio	30.95	6.00e-109	386.00
IUUC-Dno-029439	Dasypus novemcinctus	33.82	4.00e-121	426.00
IUUC-Dor-030329	Dipodomys ordii	34.81	7.00e-68	249.00
IUUC-Dse-031511	Dothistroma septosporum	32.45	5.00e-127	446.00
IUUC-Dme-031694	Drosophila melanogaster	29.95	2.00e-103	367.00
IUUC-Ete-032930	Echinops telfairi	33.51	1.00e-103	369.00
IUUC-Eca-033302	Equus caballus	34.14	8.00e-123	432.00
IUUC-Eeu-034516	Erinaceus europaeus	32.76	1.00e-125	441.00
IUUC-Fca-036064	Felis catus	34.02	7.00e-123	432.00
IUUC-Fal-037024	Ficedula albicollis	32.12	2.00e-115	408.00
IUUC-Fox-037787	Fusarium oxysporum	34.68	5.00e-147	513.00
IUUC-Fso-038378	Fusarium solani	35.71	3.00e-151	526.00
IUUC-Gmo-039637	Gadus morhua	33.53	7.00e-68	249.00
IUUC-Ggr-040108	Gaeumannomyces graminis	33.80	4.00e-149	520.00
IUUC-Gga-040982	Gallus gallus	31.80	2.00e-122	431.00
IUUC-Gac-041565	Gasterosteus aculeatus	30.98	2.00e-106	377.00
IUUC-Gma-043414	Glycine max	32.74	6.00e-120	422.00
IUUC-Ggo-045463	Gorilla gorilla	34.12	5.00e-124	436.00
IUUC-Hsa-045675	Homo sapiens	34.16	9.00e-125	439.00
IUUC-Hvu-047352	Hordeum vulgare	31.34	3.00e-112	397.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	33.64	5.00e-133	466.00
IUUC-Lch-050476	Latimeria chalumnae	30.72	1.00e-116	412.00
IUUC-Lpe-051556	Leersia perrieri	28.99	7.00e-79	286.00
IUUC-Loc-052820	Lepisosteus oculatus	30.64	2.00e-116	411.00
IUUC-Lma-052961	Leptosphaeria maculans	34.86	2.00e-135	474.00
IUUC-Laf-054006	Loxodonta africana	33.26	7.00e-117	412.00
IUUC-Mcc-055037	Macaca mulatta	34.09	9.00e-125	439.00
IUUC-Mor-057280	Magnaporthe oryzae	33.97	2.00e-150	524.00
IUUC-Mpo-057408	Magnaporthe poae	34.05	1.00e-143	502.00
IUUC-Mtr-058473	Medicago truncatula	32.56	8.00e-124	436.00
IUUC-Mla-058892	Melampsora laricipopulina	31.20	3.00e-100	357.00
IUUC-Mga-059598	Meleagris gallopavo	29.52	7.00e-84	303.00
IUUC-Mvi-060334	Microbotryum violaceum	34.19	9.00e-112	395.00
IUUC-Mmr-061239	Microcebus murinus	33.64	9.00e-121	426.00
IUUC-Mdo-062471	Monodelphis domestica	33.07	5.00e-112	396.00
IUUC-Mmu-063872	Mus musculus	32.98	3.00e-123	433.00
IUUC-Mac-064631	Musa acuminata	31.04	1.00e-96	345.00
IUUC-Mpu-066039	Mustela putorius furo	33.56	4.00e-132	463.00
IUUC-Mlu-067485	Myotis lucifugus	34.28	1.00e-120	425.00
IUUC-Nfi-068319	Neosartorya fischeri	33.95	3.00e-136	477.00
IUUC-Ncr-068725	Neurospora crassa	33.91	7.00e-146	509.00
IUUC-Nle-069050	Nomascus leucogenys	34.20	7.00e-126	442.00
IUUC-Opr-070437	Ochotona princeps	31.16	7.00e-28	117.00
IUUC-Ont-071574	Oreochromis niloticus	31.75	6.00e-113	399.00
IUUC-Oan-072826	Ornithorhynchus anatinus	31.33	3.00e-119	421.00
IUUC-Ocu-073995	Oryctolagus cuniculus	33.75	2.00e-121	427.00
IUUC-Oba-075407	Oryza barthii	28.60	2.00e-95	341.00
IUUC-Obr-076451	Oryza brachyantha	31.78	2.00e-123	434.00
IUUC-Ogl-077535	Oryza glaberrima	31.34	4.00e-118	417.00
IUUC-Ogu-077995	Oryza glumaepatula	28.82	3.00e-97	347.00
IUUC-Oin-079431	Oryza indica	31.45	7.00e-119	419.00
IUUC-Olo-080495	Oryza longistaminata	32.05	2.00e-93	335.00
IUUC-Oni-082336	Oryza nivara	29.90	5.00e-109	386.00
IUUC-Opu-084028	Oryza punctata	29.11	2.00e-102	365.00
IUUC-Oru-084500	Oryza rufipogon	28.17	7.00e-93	333.00
IUUC-Osa-086242	Oryza sativa	31.34	8.00e-119	419.00
IUUC-Ola-086612	Oryzias latipes	30.79	1.00e-89	322.00
IUUC-Olu-087703	Ostreococcus lucimarinus	28.11	2.00e-74	271.00
IUUC-Oga-088572	Otolemur garnettii	33.79	6.00e-120	422.00
IUUC-Oar-090363	Ovis aries	33.30	4.00e-125	440.00
IUUC-Ptr-090477	Pan troglodytes	34.09	4.00e-124	436.00
IUUC-Pan-092914	Papio anubis	34.20	1.00e-125	442.00
IUUC-Psi-093019	Pelodiscus sinensis	31.46	1.00e-107	382.00
IUUC-Pma-094303	Petromyzon marinus	28.28	3.00e-79	287.00
IUUC-Pno-094938	Phaeosphaeria nodorum	35.08	3.00e-133	467.00
IUUC-Ppa-095720	Physcomitrella patens	28.63	1.00e-99	355.00
IUUC-Pfo-097034	Poecilia formosa	30.94	7.00e-111	392.00
IUUC-Pab-097669	Pongo abelii	33.86	3.00e-124	437.00
IUUC-Pop-098835	Populus trichocarpa	30.47	1.00e-115	408.00
IUUC-Pca-101097	Procavia capensis	41.70	2.00e-50	191.00
IUUC-Ppe-101430	Prunus persica	30.74	6.00e-125	439.00
IUUC-Pva-103152	Pteropus vampyrus	33.67	2.00e-124	438.00
IUUC-Pgr-103517	Puccinia graminis	30.66	6.00e-121	426.00
IUUC-Ptt-103697	Puccinia triticina	29.32	4.00e-92	330.00
IUUC-Pte-104121	Pyrenophora teres	34.57	7.00e-144	502.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	35.12	6.00e-146	509.00
IUUC-Rno-105435	Rattus norvegicus	33.45	5.00e-124	436.00
IUUC-Sce-106202	Saccharomyces cerevisiae	56.38	0.00e+00	1009.00
IUUC-Sha-107272	Sarcophilus harrisii	33.21	3.00e-110	390.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	38.70	4.00e-178	616.00
IUUC-Spo-108256	Schizosaccharomyces pombe	39.17	8.00e-179	618.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	35.54	5.00e-167	579.00
IUUC-Smo-108762	Selaginella moellendorffii	30.41	9.00e-113	399.00
IUUC-Sit-110051	Setaria italica	31.13	8.00e-115	405.00
IUUC-Sly-111181	Solanum lycopersicum	31.02	2.00e-114	404.00
IUUC-Stu-112018	Solanum tuberosum	31.06	4.00e-112	397.00
IUUC-Sar-113348	Sorex araneus	33.44	4.00e-87	314.00
IUUC-Sbi-114282	Sorghum bicolor	31.46	2.00e-118	417.00
IUUC-Sre-114946	Sporisorium reilianum	28.14	4.00e-79	287.00
IUUC-Ssc-115287	Sus scrofa	34.43	4.00e-124	437.00
IUUC-Tgu-117138	Taeniopygia guttata	30.29	3.00e-92	330.00
IUUC-Tru-118232	Takifugu rubripes	32.00	2.00e-113	401.00
IUUC-Tsy-119502	Tarsius syrichta	27.63	1.00e-76	279.00
IUUC-Tni-120378	Tetraodon nigroviridis	31.71	3.00e-110	390.00
IUUC-Tca-121506	Theobroma cacao	31.71	5.00e-112	396.00
IUUC-Tre-122166	Trichoderma reesei	34.59	2.00e-160	558.00
IUUC-Tvi-122385	Trichoderma virens	35.37	3.00e-164	570.00
IUUC-Tae-122836	Triticum aestivum	31.23	1.00e-127	448.00
IUUC-Tur-126490	Triticum urartu	30.91	1.00e-97	348.00
IUUC-Tme-127157	Tuber melanosporum	36.04	6.00e-141	492.00
IUUC-Tbe-127981	Tupaia belangeri	34.62	3.00e-106	377.00
IUUC-Ttr-128886	Tursiops truncatus	32.80	1.00e-118	418.00
IUUC-Uma-129439	Ustilago maydis	27.89	4.00e-89	321.00
IUUC-Vda-129760	Verticillium dahliae	35.18	8.00e-158	548.00
IUUC-Vpa-130456	Vicugna pacos	33.33	6.00e-122	429.00
IUUC-Vvi-131086	Vitis vinifera	30.86	3.00e-118	417.00
IUUC-Xtr-131829	Xenopus tropicalis	30.95	2.00e-123	434.00
IUUC-Xma-133588	Xiphophorus maculatus	31.45	8.00e-109	385.00
IUUC-Yli-134328	Yarrowia lipolytica	41.39	0.00e+00	739.00
IUUC-Zma-135808	Zea mays	31.25	1.00e-115	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence