iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117655

Ensembl Protein ID

ENSTRUP00000018363.1

UniProt Accession

H2T125; H2T125_TAKRU

Protein Name

Coronin

Gene Name

coro1a; LOC101069823

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000007427.1	ENSTRUT00000018438.1	ENSTRUP00000018362.1
ENSTRUG00000007427.1	ENSTRUT00000018439.1	ENSTRUP00000018363.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-16	58.7	79	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gHt++v +++f   +d++++s+s D+++++W++ +g l
   Q: 79   GHTGPVLDIEFcphNDNIIASSSEDCSVMIWEIPDGGL 116
           8***********9877****************998875 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MSRSFVRNSK FRHVFGQAAK ADQCYDDIRI SQMTWDSNFC SVNPKFVAMI VDASGGGAFM 60
VLPLTKTGRI DMSYPTVCGH TGPVLDIEFC PHNDNIIASS SEDCSVMIWE IPDGGLTLPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTACTTCA ACCTCCTCCT GTAGCTTCAC AGCTCACTCC GGTAGTAGGG TGCTCCATCT 60
GAACCCTTTC AATCGACTCG TCCCCCCCCA GCAGGATTCC CAGGTAGGCC TCCGGCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029508--CORO1A
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030036--P:actin cytoskeleton organization
GO:0007420--P:brain development
GO:0021952--P:central nervous system projection neuron axonogenesis
GO:0001654--P:eye development
GO:0030595--P:leukocyte chemotaxis
GO:0001845--P:phagolysosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011101	Astyanax mexicanus	82.09	0.00e+00	811.00
IUUC-Cin-025610	Ciona intestinalis	45.93	1.00e-54	206.00
IUUC-Csv-026184	Ciona savignyi	43.63	1.00e-88	319.00
IUUC-Cne-026773	Cryptococcus neoformans	39.01	3.00e-83	303.00
IUUC-Dre-028167	Danio rerio	82.52	0.00e+00	797.00
IUUC-Fca-036472	Felis catus	67.16	0.00e+00	674.00
IUUC-Gmo-039519	Gadus morhua	78.63	0.00e+00	793.00
IUUC-Gac-042545	Gasterosteus aculeatus	84.71	0.00e+00	846.00
IUUC-Lch-050582	Latimeria chalumnae	69.08	0.00e+00	694.00
IUUC-Mla-058883	Melampsora laricipopulina	43.28	2.00e-90	326.00
IUUC-Mdo-062469	Monodelphis domestica	67.59	0.00e+00	680.00
IUUC-Ont-072391	Oreochromis niloticus	86.35	0.00e+00	848.00
IUUC-Ola-087129	Oryzias latipes	85.11	0.00e+00	844.00
IUUC-Pfo-096735	Poecilia formosa	85.93	0.00e+00	846.00
IUUC-Pgr-103354	Puccinia graminis	42.18	5.00e-93	335.00
IUUC-Ptt-103735	Puccinia triticina	35.58	3.00e-72	266.00
IUUC-Sja-107992	Schizosaccharomyces japonicus	42.28	4.00e-97	348.00
IUUC-Sar-113292	Sorex araneus	75.68	9.00e-178	615.00
IUUC-Sre-114911	Sporisorium reilianum	36.47	7.00e-79	288.00
IUUC-Tni-120773	Tetraodon nigroviridis	90.85	0.00e+00	867.00
IUUC-Uma-129489	Ustilago maydis	36.89	6.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence