iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027159

Ensembl Protein ID

CMP042CT

UniProt Accession

M1V630; M1V630_CYAM1

Genbank Protein ID

BAM81705.1

Protein Name

Similar to U3 snoRNP component Utp13p

Genbank Nucleotide ID

AP006498

Gene Name

CYME_CMP042C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMP042C	CMP042CT	CMP042CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-30	100.5	845	883
UBD/Beta-Prp	6.60e-41	138.4	791	1012

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH  sv++++f  +++ l+s+s D ti+vW++ +g +l+
   Q: 845  GHRRSVWAVCFghNEPVLASASADRTIRVWSIADGQCLR 883
           8***********655*********************997 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.......lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..g 92
           +t+ ++h++ i+c++ +p+ ++la+gs+d+++k+w++++           r lsgh   v+av+f +++++l+++s Drti+vw++ +g+c++ l+  g
   Q: 791  CTVAHAHDGEIHCLATAPNAPYLASGSQDKSVKLWRISSDPDgnvqvtaWRMLSGHRRSVWAVCFGHNEPVLASASADRTIRVWSIADGQCLRQLEagG 889
           8999*********************************9855567799988888*******************************************552 PP
   S: 93   hedsvls..........lsfspsgdklvsGshdrtirvwdletgqclee.........................................tlsghdgvv 140
             +   s          +sf + ++++v+Gs+   +  w++++gq l e                                         + + h ++ 
   Q: 890  --AAFSSrapnlgsflcCSFLAGDSRIVAGSAEGALYQWHWRSGQLLGEiyrcrsmevpqrssssssirsrthesahqdrlwsllviehdLRDTHLESA 986
           ..333334466666666*****99***************************************************************999777777777 PP
   S: 141  ncvvvhpdg.nllvsGslDrtvrlWd 165
           ++ + +++  +llv+G++D+ +r W+
   Q: 987  STDSNNCSRcSLLVTGGADGRIRCWR 1012
           777777666699*************5 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MDRSELHASS CAWEITYALS SLHTGGKVVP WPIERHSQEG TTATPEQQRH SRVPEFHSWV 60
GLLTQKANRA LGCILTADPC DESDVDRTAS AEEGAGEAPP CCASLLPVVA LRTLPRTRDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCGGA GCGAATTACA TGCTAGCAGC TGCGCCTGGG AAATAACATA CGCCCTCTCT 60
AGTTTACACA CAGGTGGCAA AGTCGTTCCG TGGCCCATCG AGCGCCACAG TCAAGAGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

cme:CYME_CMP042C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	26.67	2.00e-28	119.00
IUUC-Aml-002376	Ailuropoda melanoleuca	24.20	8.00e-28	116.00
IUUC-Atr-002486	Amborella trichopoda	26.32	3.00e-43	167.00
IUUC-Apl-003519	Anas platyrhynchos	23.00	1.00e-27	116.00
IUUC-Aly-006152	Arabidopsis lyrata	25.00	6.00e-39	153.00
IUUC-Ath-006966	Arabidopsis thaliana	25.04	6.00e-39	153.00
IUUC-Ago-007746	Ashbya gossypii	23.93	4.00e-34	137.00
IUUC-Afu-008798	Aspergillus fumigatus	23.36	2.00e-21	95.50
IUUC-Ani-009278	Aspergillus nidulans	21.59	2.00e-24	105.00
IUUC-Ang-009640	Aspergillus niger	23.51	4.00e-23	101.00
IUUC-Ate-010320	Aspergillus terreus	22.32	2.00e-21	95.90
IUUC-Bgr-012054	Blumeria graminis	22.83	2.00e-20	92.40
IUUC-Bta-012611	Bos taurus	24.69	2.00e-26	112.00
IUUC-Bci-013797	Botrytis cinerea	25.44	7.00e-28	117.00
IUUC-Bdi-014384	Brachypodium distachyon	23.23	4.00e-36	144.00
IUUC-Bol-015097	Brassica oleracea	24.82	1.00e-32	132.00
IUUC-Bra-017798	Brassica rapa	22.79	3.00e-34	138.00
IUUC-Cel-018664	Caenorhabditis elegans	23.39	4.00e-31	127.00
IUUC-Cja-019092	Callithrix jacchus	25.44	5.00e-30	124.00
IUUC-Cfa-021040	Canis familiaris	24.38	3.00e-27	114.00
IUUC-Cpo-022529	Cavia porcellus	24.69	6.00e-27	114.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	41.91	2.00e-23	99.00
IUUC-Csa-024205	Chlorocebus sabaeus	25.35	6.00e-31	127.00
IUUC-Cin-025560	Ciona intestinalis	25.04	1.00e-33	135.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	23.96	3.00e-26	111.00
IUUC-Cne-027082	Cryptococcus neoformans	23.57	5.00e-33	134.00
IUUC-Dre-028138	Danio rerio	24.37	6.00e-25	107.00
IUUC-Dor-030685	Dipodomys ordii	25.47	2.00e-22	98.20
IUUC-Dse-031429	Dothistroma septosporum	24.12	6.00e-24	103.00
IUUC-Dme-031995	Drosophila melanogaster	22.82	7.00e-29	120.00
IUUC-Ete-033086	Echinops telfairi	25.87	2.00e-34	138.00
IUUC-Eca-034354	Equus caballus	23.94	3.00e-23	101.00
IUUC-Eeu-034832	Erinaceus europaeus	24.86	8.00e-28	116.00
IUUC-Fca-036136	Felis catus	24.22	6.00e-28	117.00
IUUC-Fal-036859	Ficedula albicollis	23.65	5.00e-27	114.00
IUUC-Fox-037863	Fusarium oxysporum	23.62	3.00e-23	101.00
IUUC-Fso-038389	Fusarium solani	23.13	3.00e-22	98.60
IUUC-Ggr-039820	Gaeumannomyces graminis	27.37	3.00e-18	85.10
IUUC-Gga-040263	Gallus gallus	22.48	6.00e-27	113.00
IUUC-Gac-041291	Gasterosteus aculeatus	26.11	6.00e-39	153.00
IUUC-Gma-044328	Glycine max	23.44	4.00e-41	160.00
IUUC-Ggo-044693	Gorilla gorilla	25.52	7.00e-30	123.00
IUUC-Hsa-046048	Homo sapiens	24.75	8.00e-29	120.00
IUUC-Hvu-047608	Hordeum vulgare	24.87	3.00e-40	158.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	25.40	1.00e-31	129.00
IUUC-Kpa-049209	Komagataella pastoris	22.46	1.00e-29	122.00
IUUC-Lch-050085	Latimeria chalumnae	23.95	4.00e-26	110.00
IUUC-Lpe-050945	Leersia perrieri	23.24	3.00e-36	144.00
IUUC-Loc-052679	Lepisosteus oculatus	23.95	4.00e-37	147.00
IUUC-Laf-053685	Loxodonta africana	25.40	4.00e-26	111.00
IUUC-Mcc-055861	Macaca mulatta	25.38	9.00e-28	116.00
IUUC-Mor-057234	Magnaporthe oryzae	25.64	6.00e-21	94.00
IUUC-Mtr-058122	Medicago truncatula	23.67	1.00e-41	162.00
IUUC-Mla-058980	Melampsora laricipopulina	22.10	1.00e-28	119.00
IUUC-Mga-060080	Meleagris gallopavo	22.05	1.00e-26	112.00
IUUC-Mvi-060338	Microbotryum violaceum	24.71	2.00e-29	122.00
IUUC-Mmr-060762	Microcebus murinus	25.17	6.00e-31	127.00
IUUC-Mdo-061975	Monodelphis domestica	24.78	2.00e-27	115.00
IUUC-Mmu-064038	Mus musculus	26.01	3.00e-30	124.00
IUUC-Mac-065189	Musa acuminata	25.04	4.00e-46	177.00
IUUC-Mpu-066526	Mustela putorius furo	24.73	1.00e-24	106.00
IUUC-Mlu-067716	Myotis lucifugus	24.26	3.00e-35	141.00
IUUC-Nfi-068474	Neosartorya fischeri	23.32	1.00e-20	93.20
IUUC-Nle-069832	Nomascus leucogenys	24.46	3.00e-30	124.00
IUUC-Opr-071183	Ochotona princeps	25.10	1.00e-27	115.00
IUUC-Ont-072371	Oreochromis niloticus	24.46	5.00e-40	157.00
IUUC-Oba-075963	Oryza barthii	24.79	2.00e-41	161.00
IUUC-Obr-076173	Oryza brachyantha	22.82	4.00e-39	154.00
IUUC-Ogl-077692	Oryza glaberrima	24.79	2.00e-41	161.00
IUUC-Ogu-078965	Oryza glumaepatula	24.79	3.00e-41	161.00
IUUC-Oin-079708	Oryza indica	24.62	3.00e-41	160.00
IUUC-Olo-080679	Oryza longistaminata	24.92	3.00e-41	161.00
IUUC-Oni-082960	Oryza nivara	24.62	3.00e-41	161.00
IUUC-Opu-083282	Oryza punctata	24.79	2.00e-37	149.00
IUUC-Oru-085224	Oryza rufipogon	24.62	3.00e-41	160.00
IUUC-Osa-085320	Oryza sativa	24.62	3.00e-41	160.00
IUUC-Olu-087814	Ostreococcus lucimarinus	25.19	3.00e-29	121.00
IUUC-Oga-088458	Otolemur garnettii	24.48	7.00e-34	136.00
IUUC-Ptr-090749	Pan troglodytes	25.17	7.00e-29	120.00
IUUC-Pan-091691	Papio anubis	28.57	1.00e-24	105.00
IUUC-Psi-093200	Pelodiscus sinensis	23.04	3.00e-26	111.00
IUUC-Pma-094165	Petromyzon marinus	24.24	3.00e-18	84.70
IUUC-Pno-095048	Phaeosphaeria nodorum	23.82	5.00e-25	107.00
IUUC-Ppa-095336	Physcomitrella patens	24.54	1.00e-42	166.00
IUUC-Pfo-096132	Poecilia formosa	24.40	2.00e-31	128.00
IUUC-Pab-097855	Pongo abelii	25.18	9.00e-32	129.00
IUUC-Pop-099434	Populus trichocarpa	24.87	4.00e-38	150.00
IUUC-Pca-100232	Procavia capensis	28.04	3.00e-18	84.70
IUUC-Ppe-101665	Prunus persica	24.06	1.00e-40	159.00
IUUC-Pva-102178	Pteropus vampyrus	23.98	2.00e-27	115.00
IUUC-Pgr-103288	Puccinia graminis	23.94	4.00e-31	127.00
IUUC-Ptt-103808	Puccinia triticina	21.96	7.00e-24	103.00
IUUC-Pte-104205	Pyrenophora teres	25.59	7.00e-30	123.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	25.92	2.00e-30	125.00
IUUC-Rno-105617	Rattus norvegicus	25.71	1.00e-31	129.00
IUUC-Sce-106281	Saccharomyces cerevisiae	21.50	5.00e-28	117.00
IUUC-Sha-107378	Sarcophilus harrisii	25.09	1.00e-25	108.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	26.94	2.00e-36	144.00
IUUC-Spo-108361	Schizosaccharomyces pombe	25.39	3.00e-31	127.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	24.57	7.00e-26	110.00
IUUC-Smo-109257	Selaginella moellendorffii	24.20	5.00e-45	173.00
IUUC-Sit-110258	Setaria italica	23.46	1.00e-41	162.00
IUUC-Sly-111521	Solanum lycopersicum	24.64	1.00e-40	159.00
IUUC-Stu-112718	Solanum tuberosum	39.56	2.00e-16	75.90
IUUC-Sbi-114768	Sorghum bicolor	23.64	1.00e-43	169.00
IUUC-Tgu-117320	Taeniopygia guttata	22.74	4.00e-20	90.90
IUUC-Tru-118024	Takifugu rubripes	25.67	1.00e-34	139.00
IUUC-Tni-119971	Tetraodon nigroviridis	25.67	8.00e-36	143.00
IUUC-Tca-121248	Theobroma cacao	25.55	3.00e-37	148.00
IUUC-Tre-122079	Trichoderma reesei	22.81	3.00e-25	107.00
IUUC-Tvi-122554	Trichoderma virens	24.14	5.00e-27	114.00
IUUC-Tae-124473	Triticum aestivum	25.00	5.00e-42	164.00
IUUC-Tur-126436	Triticum urartu	26.67	2.00e-28	118.00
IUUC-Ttr-128964	Tursiops truncatus	24.47	3.00e-30	124.00
IUUC-Uma-129473	Ustilago maydis	24.54	1.00e-19	89.70
IUUC-Vda-129749	Verticillium dahliae	22.46	6.00e-19	87.40
IUUC-Vvi-131511	Vitis vinifera	25.49	3.00e-37	148.00
IUUC-Xma-133672	Xiphophorus maculatus	24.23	9.00e-36	143.00
IUUC-Yli-134602	Yarrowia lipolytica	22.30	3.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence