iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017923

Ensembl Protein ID

Bra019919.1-P

UniProt Accession

M4DTS6; M4DTS6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra019919	Bra019919.1	Bra019919.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-24	84.9	317	353
UBD/Beta-Prp	1.60e-41	143.4	267	478

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH   v++++f +d t ++++++D++ik WD+ tg +
   Q: 317  GHGKAVRDICFsNDgTKFLTAGYDKNIKYWDTETGQV 353
           8999********999*****************99976 PP

UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh 179
            vht++gh++ v +++f+p  g+ l+s++ d  +++wd+ ++g+c++ t  gh ++v+ ++++ dg  + ++++D+ ++ Wd +tg+++ t++ g+
   Q: 267  LVHTWSGHTKGVSAIRFFPkHGHLLLSAGMDCKVKIWDVyNSGKCMR-TYMGHGKAVRDICFSNDGTKFLTAGYDKNIKYWDTETGQVISTFSTGK 361
           56777777777777777775557777777777777777634466666.777777777777777777777777777777777777777777776667 PP
   S: 180  tdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavls 274
            ++v +l+ d+++ + l++g  d+++  wd+ +ge+ +++  h   v+ + f +n+ r+v+ s+D+s+r+W      ++k ++ ++ ++++   ++
   Q: 362  IPYVVKLNPDDDKqNILLAGMSDKKIVQWDINSGEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISVH 457
           777777775544426666777777777777777777777777777777777777777777777777777777777777777777775555555557 PP
   S: 275  fgdnvlvlgsedskvniwklk 295
           ++++ l++ s d+++ i+  +
   Q: 458  PNGKWLAAQSLDNQILIYGTR 478
           777777777777777776544 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDLIQSYDGG DASSSPEPSP PRMLKAKSSA PEVDDTALAL TVSNASQSKS NPINPTQHAV 60
AFNPTYDQLW APIYGPAHPY AKDGIAQGMR NHKLGFVEDA SIGSFVFDEQ YSTFQKYGYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTGA TTCAATCCTA CGACGGAGGA GACGCCTCTT CCTCGCCGGA ACCCTCACCG 60
CCTCGCATGC TGAAGGCGAA GTCATCGGCC CCGGAGGTAG ACGACACGGC GCTCGCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	68.83	0.00e+00	785.00
IUUC-Aml-002243	Ailuropoda melanoleuca	48.23	3.00e-101	361.00
IUUC-Atr-002502	Amborella trichopoda	78.24	0.00e+00	877.00
IUUC-Apl-003885	Anas platyrhynchos	51.79	6.00e-159	553.00
IUUC-Aca-004854	Anolis carolinensis	35.25	5.00e-93	334.00
IUUC-Aly-006158	Arabidopsis lyrata	88.27	0.00e+00	983.00
IUUC-Ath-007474	Arabidopsis thaliana	86.89	0.00e+00	968.00
IUUC-Ago-007726	Ashbya gossypii	38.48	3.00e-68	252.00
IUUC-Acl-008220	Aspergillus clavatus	42.07	1.00e-121	429.00
IUUC-Afl-008473	Aspergillus flavus	41.08	1.00e-119	423.00
IUUC-Afu-008773	Aspergillus fumigatus	42.45	2.00e-121	429.00
IUUC-Ani-009323	Aspergillus nidulans	41.84	3.00e-107	382.00
IUUC-Ang-009851	Aspergillus niger	40.31	4.00e-117	414.00
IUUC-Aor-009950	Aspergillus oryzae	41.08	1.00e-119	423.00
IUUC-Ate-010372	Aspergillus terreus	41.46	3.00e-124	438.00
IUUC-Ame-011660	Astyanax mexicanus	49.19	9.00e-158	550.00
IUUC-Bgr-012230	Blumeria graminis	39.62	1.00e-107	383.00
IUUC-Bta-012568	Bos taurus	50.44	2.00e-158	551.00
IUUC-Bci-013646	Botrytis cinerea	53.47	4.00e-110	391.00
IUUC-Bdi-014199	Brachypodium distachyon	71.56	0.00e+00	781.00
IUUC-Bol-015695	Brassica oleracea	96.30	0.00e+00	1082.00
IUUC-Cel-018535	Caenorhabditis elegans	39.45	5.00e-126	444.00
IUUC-Cja-019071	Callithrix jacchus	50.81	3.00e-158	551.00
IUUC-Cfa-020559	Canis familiaris	52.27	5.00e-158	550.00
IUUC-Cpo-022356	Cavia porcellus	50.27	6.00e-158	550.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	50.44	1.00e-93	335.00
IUUC-Csa-023125	Chlorocebus sabaeus	50.81	3.00e-158	551.00
IUUC-Cho-024676	Choloepus hoffmanni	49.62	6.00e-149	520.00
IUUC-Cin-025229	Ciona intestinalis	49.72	2.00e-149	521.00
IUUC-Csv-025868	Ciona savignyi	70.65	7.00e-39	150.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	45.28	2.00e-95	342.00
IUUC-Cne-026885	Cryptococcus neoformans	47.82	5.00e-134	471.00
IUUC-Dre-027631	Danio rerio	51.23	7.00e-161	560.00
IUUC-Dno-029815	Dasypus novemcinctus	49.19	2.00e-154	539.00
IUUC-Dor-030978	Dipodomys ordii	52.60	3.00e-136	478.00
IUUC-Dse-031520	Dothistroma septosporum	46.85	3.00e-96	345.00
IUUC-Dme-032050	Drosophila melanogaster	45.32	2.00e-148	519.00
IUUC-Ete-032866	Echinops telfairi	49.73	3.00e-153	535.00
IUUC-Eca-033384	Equus caballus	50.63	2.00e-156	545.00
IUUC-Eeu-034471	Erinaceus europaeus	40.97	2.00e-106	379.00
IUUC-Fca-035727	Felis catus	50.81	2.00e-158	552.00
IUUC-Fal-036774	Ficedula albicollis	52.26	1.00e-161	562.00
IUUC-Fox-037951	Fusarium oxysporum	50.28	8.00e-111	393.00
IUUC-Fso-038287	Fusarium solani	53.10	6.00e-110	390.00
IUUC-Gmo-039670	Gadus morhua	49.91	2.00e-161	561.00
IUUC-Ggr-039764	Gaeumannomyces graminis	47.70	4.00e-104	371.00
IUUC-Gga-040293	Gallus gallus	52.08	4.00e-162	564.00
IUUC-Gac-042159	Gasterosteus aculeatus	49.82	5.00e-160	557.00
IUUC-Gma-044299	Glycine max	77.35	0.00e+00	825.00
IUUC-Ggo-044864	Gorilla gorilla	50.45	2.00e-158	552.00
IUUC-Hsa-046602	Homo sapiens	50.45	2.00e-158	552.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	60.57	2.00e-140	491.00
IUUC-Kpa-049318	Komagataella pastoris	48.36	4.00e-93	334.00
IUUC-Lch-049796	Latimeria chalumnae	42.57	2.00e-127	448.00
IUUC-Lpe-051153	Leersia perrieri	74.08	0.00e+00	808.00
IUUC-Loc-052467	Lepisosteus oculatus	49.55	1.00e-161	562.00
IUUC-Lma-053107	Leptosphaeria maculans	51.30	4.00e-107	381.00
IUUC-Laf-053787	Loxodonta africana	50.45	7.00e-161	560.00
IUUC-Mcc-055706	Macaca mulatta	50.81	3.00e-158	551.00
IUUC-Meu-056757	Macropus eugenii	60.30	1.00e-119	423.00
IUUC-Mor-057079	Magnaporthe oryzae	48.31	7.00e-104	370.00
IUUC-Mpo-057533	Magnaporthe poae	49.86	2.00e-105	375.00
IUUC-Mtr-057950	Medicago truncatula	78.38	0.00e+00	875.00
IUUC-Mla-058910	Melampsora laricipopulina	58.49	7.00e-135	474.00
IUUC-Mga-059366	Meleagris gallopavo	52.08	6.00e-162	563.00
IUUC-Mvi-060349	Microbotryum violaceum	59.71	4.00e-127	448.00
IUUC-Mmr-061209	Microcebus murinus	50.81	3.00e-162	564.00
IUUC-Mdo-062118	Monodelphis domestica	52.08	5.00e-162	564.00
IUUC-Mmu-063173	Mus musculus	52.27	3.00e-158	551.00
IUUC-Mac-065080	Musa acuminata	77.76	0.00e+00	846.00
IUUC-Mpu-066659	Mustela putorius furo	52.27	3.00e-158	551.00
IUUC-Mlu-067029	Myotis lucifugus	52.18	2.00e-158	551.00
IUUC-Nfi-068334	Neosartorya fischeri	43.21	2.00e-123	435.00
IUUC-Ncr-068675	Neurospora crassa	44.81	1.00e-89	323.00
IUUC-Nle-070113	Nomascus leucogenys	50.99	5.00e-159	554.00
IUUC-Opr-070685	Ochotona princeps	49.08	7.00e-157	546.00
IUUC-Ont-071680	Oreochromis niloticus	49.19	9.00e-160	556.00
IUUC-Oan-073573	Ornithorhynchus anatinus	51.10	1.00e-147	516.00
IUUC-Ocu-074074	Oryctolagus cuniculus	50.63	2.00e-161	562.00
IUUC-Oba-075625	Oryza barthii	74.18	0.00e+00	808.00
IUUC-Obr-076510	Oryza brachyantha	73.58	0.00e+00	800.00
IUUC-Ogl-077275	Oryza glaberrima	74.18	0.00e+00	808.00
IUUC-Ogu-078563	Oryza glumaepatula	74.18	0.00e+00	808.00
IUUC-Oin-079898	Oryza indica	82.03	0.00e+00	673.00
IUUC-Olo-081080	Oryza longistaminata	74.19	0.00e+00	746.00
IUUC-Oni-083121	Oryza nivara	74.18	0.00e+00	808.00
IUUC-Opu-083329	Oryza punctata	74.13	0.00e+00	806.00
IUUC-Oru-084807	Oryza rufipogon	72.89	0.00e+00	711.00
IUUC-Osa-086039	Oryza sativa	74.18	0.00e+00	808.00
IUUC-Ola-087149	Oryzias latipes	50.00	4.00e-162	564.00
IUUC-Olu-087627	Ostreococcus lucimarinus	50.59	1.00e-146	512.00
IUUC-Oga-088359	Otolemur garnettii	50.99	1.00e-158	553.00
IUUC-Oar-089390	Ovis aries	50.44	3.00e-158	551.00
IUUC-Ptr-090894	Pan troglodytes	50.45	2.00e-158	552.00
IUUC-Pan-092476	Papio anubis	50.81	3.00e-158	551.00
IUUC-Psi-093527	Pelodiscus sinensis	50.10	2.00e-146	511.00
IUUC-Pno-094771	Phaeosphaeria nodorum	50.00	1.00e-105	376.00
IUUC-Ppa-095386	Physcomitrella patens	71.84	0.00e+00	829.00
IUUC-Pfo-096139	Poecilia formosa	49.64	3.00e-161	561.00
IUUC-Pab-097838	Pongo abelii	50.20	4.00e-136	477.00
IUUC-Pop-099962	Populus trichocarpa	81.33	0.00e+00	897.00
IUUC-Pca-100876	Procavia capensis	44.51	6.00e-131	460.00
IUUC-Ppe-101777	Prunus persica	79.02	0.00e+00	870.00
IUUC-Pva-102418	Pteropus vampyrus	52.46	9.00e-159	553.00
IUUC-Pgr-103456	Puccinia graminis	49.81	1.00e-148	520.00
IUUC-Ptt-103731	Puccinia triticina	46.22	5.00e-135	474.00
IUUC-Pte-104386	Pyrenophora teres	48.90	1.00e-104	373.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	49.03	2.00e-104	372.00
IUUC-Rno-105694	Rattus norvegicus	49.55	8.00e-150	523.00
IUUC-Sce-106339	Saccharomyces cerevisiae	36.95	4.00e-73	268.00
IUUC-Sha-106709	Sarcophilus harrisii	51.70	4.00e-160	557.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	37.52	2.00e-109	389.00
IUUC-Spo-108331	Schizosaccharomyces pombe	36.95	6.00e-105	374.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	40.95	4.00e-100	358.00
IUUC-Smo-109326	Selaginella moellendorffii	60.88	0.00e+00	660.00
IUUC-Sit-110446	Setaria italica	74.45	0.00e+00	802.00
IUUC-Sly-111330	Solanum lycopersicum	79.67	0.00e+00	879.00
IUUC-Stu-112610	Solanum tuberosum	77.55	0.00e+00	878.00
IUUC-Sar-113065	Sorex araneus	38.46	3.00e-39	155.00
IUUC-Sbi-114005	Sorghum bicolor	74.03	0.00e+00	785.00
IUUC-Sre-114988	Sporisorium reilianum	44.60	6.00e-136	477.00
IUUC-Ssc-115760	Sus scrofa	50.81	2.00e-158	551.00
IUUC-Tgu-116493	Taeniopygia guttata	52.08	7.00e-163	566.00
IUUC-Tru-118489	Takifugu rubripes	48.29	2.00e-157	549.00
IUUC-Tsy-119332	Tarsius syrichta	50.27	2.00e-162	565.00
IUUC-Tni-120202	Tetraodon nigroviridis	46.86	8.00e-151	526.00
IUUC-Tca-121429	Theobroma cacao	76.88	0.00e+00	894.00
IUUC-Tre-122162	Trichoderma reesei	53.35	2.00e-112	399.00
IUUC-Tvi-122500	Trichoderma virens	53.06	2.00e-112	398.00
IUUC-Tae-125557	Triticum aestivum	70.51	0.00e+00	789.00
IUUC-Tur-126554	Triticum urartu	70.45	0.00e+00	786.00
IUUC-Tme-126919	Tuber melanosporum	42.31	8.00e-126	443.00
IUUC-Tbe-127968	Tupaia belangeri	47.39	1.00e-145	509.00
IUUC-Ttr-129215	Tursiops truncatus	50.54	1.00e-156	546.00
IUUC-Uma-129622	Ustilago maydis	44.84	1.00e-137	483.00
IUUC-Vda-129750	Verticillium dahliae	51.40	7.00e-110	390.00
IUUC-Vpa-130617	Vicugna pacos	51.70	2.00e-152	531.00
IUUC-Vvi-131238	Vitis vinifera	80.69	0.00e+00	881.00
IUUC-Xtr-131865	Xenopus tropicalis	49.73	1.00e-158	552.00
IUUC-Xma-133627	Xiphophorus maculatus	49.82	2.00e-161	561.00
IUUC-Yli-134390	Yarrowia lipolytica	50.99	2.00e-105	375.00
IUUC-Zma-134910	Zea mays	73.90	0.00e+00	801.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence