iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048304

Ensembl Protein ID

ENSSTOP00000006764.2

UniProt Accession

I3M9Z9; I3M9Z9_ICTTR

Genbank Protein ID

ENSSTOP00000006764

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01060084

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000007571.2	ENSSTOT00000007567.2	ENSSTOP00000006764.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-12	45.0	236	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           H+ +vt la+    d+ll+++s D t+k+WDlr+ 
   Q: 236  HKKKVTHLALnpcCDWLLATASVDQTVKLWDLRQI 270
           7888999999975559****************975 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

RKRPEAPKTP SVAARLRSKR SPRELEPEAK KLRVKGSGSS RRYDSGCLWA GLASLQVPPP 60
SSSIVRALHQ YKLGKAAWPS LQQGLQQSFL HSLASYRIFQ KAAPFDRRAT SLAWHPTHPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGAAACGCC CGGAAGCCCC GAAGACCCCC AGCGTGGCGG CGCGCCTCCG GAGCAAGAGA 60
AGTCCCCGGG AGCTGGAGCC CGAGGCCAAG AAGCTCAGGG TGAAGGGCTC CGGTACTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	30.46	1.00e-31	130.00
IUUC-Aml-002203	Ailuropoda melanoleuca	88.07	0.00e+00	754.00
IUUC-Atr-002957	Amborella trichopoda	31.21	2.00e-35	143.00
IUUC-Apl-003832	Anas platyrhynchos	59.78	6.00e-124	437.00
IUUC-Aca-004358	Anolis carolinensis	52.45	2.00e-126	445.00
IUUC-Aly-006296	Arabidopsis lyrata	31.91	1.00e-36	147.00
IUUC-Ath-007115	Arabidopsis thaliana	32.22	3.00e-38	152.00
IUUC-Ame-010817	Astyanax mexicanus	54.49	2.00e-120	426.00
IUUC-Bta-012914	Bos taurus	87.11	0.00e+00	759.00
IUUC-Bdi-014261	Brachypodium distachyon	31.08	2.00e-32	133.00
IUUC-Bol-015317	Brassica oleracea	31.90	1.00e-36	147.00
IUUC-Bra-016848	Brassica rapa	31.90	2.00e-36	147.00
IUUC-Cja-018967	Callithrix jacchus	85.20	0.00e+00	735.00
IUUC-Cfa-021238	Canis familiaris	88.07	0.00e+00	725.00
IUUC-Cpo-022063	Cavia porcellus	81.53	0.00e+00	722.00
IUUC-Csa-023382	Chlorocebus sabaeus	86.40	0.00e+00	761.00
IUUC-Cho-024805	Choloepus hoffmanni	59.42	9.00e-92	329.00
IUUC-Dre-028732	Danio rerio	49.04	4.00e-107	381.00
IUUC-Dor-030461	Dipodomys ordii	79.03	8.00e-126	443.00
IUUC-Ete-033038	Echinops telfairi	74.46	0.00e+00	643.00
IUUC-Eca-033772	Equus caballus	88.31	0.00e+00	719.00
IUUC-Eeu-034662	Erinaceus europaeus	59.90	6.00e-59	221.00
IUUC-Fca-036095	Felis catus	86.84	0.00e+00	735.00
IUUC-Gmo-039683	Gadus morhua	50.42	3.00e-106	378.00
IUUC-Gga-040530	Gallus gallus	56.51	7.00e-126	443.00
IUUC-Gac-041517	Gasterosteus aculeatus	50.41	2.00e-98	352.00
IUUC-Gma-043378	Glycine max	31.23	3.00e-37	149.00
IUUC-Ggo-045364	Gorilla gorilla	86.63	0.00e+00	763.00
IUUC-Hsa-046354	Homo sapiens	86.40	0.00e+00	762.00
IUUC-Hvu-047151	Hordeum vulgare	31.39	4.00e-28	118.00
IUUC-Lpe-051256	Leersia perrieri	30.70	1.00e-31	130.00
IUUC-Loc-052398	Lepisosteus oculatus	53.77	5.00e-127	447.00
IUUC-Laf-053562	Loxodonta africana	86.16	0.00e+00	719.00
IUUC-Mcc-055197	Macaca mulatta	67.14	3.00e-157	547.00
IUUC-Meu-056151	Macropus eugenii	75.93	3.00e-119	420.00
IUUC-Mtr-057940	Medicago truncatula	31.00	3.00e-35	142.00
IUUC-Mga-059923	Meleagris gallopavo	59.52	5.00e-132	464.00
IUUC-Mmr-061465	Microcebus murinus	92.67	4.00e-156	543.00
IUUC-Mdo-063063	Monodelphis domestica	65.87	9.00e-156	542.00
IUUC-Mmu-064294	Mus musculus	82.82	0.00e+00	698.00
IUUC-Mac-065598	Musa acuminata	31.71	2.00e-34	140.00
IUUC-Mpu-066831	Mustela putorius furo	88.54	0.00e+00	751.00
IUUC-Mlu-067222	Myotis lucifugus	82.34	0.00e+00	714.00
IUUC-Nle-069581	Nomascus leucogenys	86.63	0.00e+00	766.00
IUUC-Opr-070644	Ochotona princeps	85.04	0.00e+00	724.00
IUUC-Ont-072605	Oreochromis niloticus	51.56	2.00e-119	422.00
IUUC-Oan-072973	Ornithorhynchus anatinus	71.51	6.00e-151	526.00
IUUC-Ocu-074615	Oryctolagus cuniculus	85.92	0.00e+00	753.00
IUUC-Oba-075283	Oryza barthii	30.15	2.00e-31	130.00
IUUC-Obr-076605	Oryza brachyantha	31.80	2.00e-33	137.00
IUUC-Ogl-077512	Oryza glaberrima	30.15	2.00e-31	130.00
IUUC-Ogu-078329	Oryza glumaepatula	30.15	2.00e-31	130.00
IUUC-Oin-079980	Oryza indica	30.15	3.00e-31	129.00
IUUC-Olo-080516	Oryza longistaminata	30.15	3.00e-31	129.00
IUUC-Ome-081415	Oryza meridionalis	30.15	2.00e-31	130.00
IUUC-Oni-082985	Oryza nivara	30.15	3.00e-31	129.00
IUUC-Opu-084159	Oryza punctata	31.08	3.00e-32	132.00
IUUC-Oru-085137	Oryza rufipogon	30.15	1.00e-31	130.00
IUUC-Osa-085614	Oryza sativa	30.15	1.00e-31	130.00
IUUC-Ola-087044	Oryzias latipes	43.40	2.00e-104	372.00
IUUC-Oga-088274	Otolemur garnettii	88.31	0.00e+00	757.00
IUUC-Oar-089826	Ovis aries	87.59	0.00e+00	769.00
IUUC-Ptr-091631	Pan troglodytes	86.40	0.00e+00	762.00
IUUC-Pan-092535	Papio anubis	86.87	0.00e+00	765.00
IUUC-Psi-093815	Pelodiscus sinensis	54.44	3.00e-122	431.00
IUUC-Pma-094474	Petromyzon marinus	49.55	1.00e-98	352.00
IUUC-Ppa-095414	Physcomitrella patens	28.70	3.00e-27	116.00
IUUC-Pfo-096559	Poecilia formosa	46.65	2.00e-103	369.00
IUUC-Pab-098528	Pongo abelii	86.40	0.00e+00	763.00
IUUC-Pop-100064	Populus trichocarpa	30.40	8.00e-36	144.00
IUUC-Pca-100803	Procavia capensis	84.01	0.00e+00	715.00
IUUC-Ppe-101966	Prunus persica	31.71	2.00e-36	146.00
IUUC-Pva-103213	Pteropus vampyrus	85.68	0.00e+00	711.00
IUUC-Rno-105087	Rattus norvegicus	83.05	0.00e+00	714.00
IUUC-Sha-107466	Sarcophilus harrisii	72.47	7.00e-155	539.00
IUUC-Smo-108958	Selaginella moellendorffii	28.14	7.00e-26	111.00
IUUC-Sit-109968	Setaria italica	29.85	2.00e-30	127.00
IUUC-Sly-111495	Solanum lycopersicum	30.89	1.00e-33	137.00
IUUC-Stu-112182	Solanum tuberosum	27.38	7.00e-13	69.30
IUUC-Sar-113272	Sorex araneus	80.24	3.00e-166	577.00
IUUC-Sbi-114706	Sorghum bicolor	27.73	3.00e-26	113.00
IUUC-Ssc-115437	Sus scrofa	86.87	0.00e+00	748.00
IUUC-Tgu-116602	Taeniopygia guttata	53.65	4.00e-123	434.00
IUUC-Tru-118698	Takifugu rubripes	50.00	1.00e-97	349.00
IUUC-Tsy-119027	Tarsius syrichta	81.70	0.00e+00	657.00
IUUC-Tni-119787	Tetraodon nigroviridis	49.16	4.00e-102	364.00
IUUC-Tca-121447	Theobroma cacao	31.42	3.00e-36	145.00
IUUC-Tae-125839	Triticum aestivum	30.77	7.00e-32	131.00
IUUC-Tur-126724	Triticum urartu	30.77	7.00e-32	131.00
IUUC-Tbe-127680	Tupaia belangeri	84.44	2.00e-135	474.00
IUUC-Ttr-128201	Tursiops truncatus	76.85	0.00e+00	630.00
IUUC-Vpa-130451	Vicugna pacos	70.00	3.00e-105	374.00
IUUC-Vvi-131001	Vitis vinifera	30.37	2.00e-35	143.00
IUUC-Xtr-132266	Xenopus tropicalis	62.54	3.00e-131	461.00
IUUC-Xma-133034	Xiphophorus maculatus	51.34	9.00e-118	416.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence