iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017300

Ensembl Protein ID

Bra029577.1-P

UniProt Accession

M4ELA9; M4ELA9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra029577	Bra029577.1	Bra029577.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DDB1	0	1694.2	734	1086

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DDB1

   S: 784  seleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltvaekkvkgavi 877
            ++ee+e++f+++lD+++fe++++++l+++E+a+s+lS++++dD+++yy+v+ta+vlpeene++kgrilvf+ved+   kL+ +aek++kgav+
   Q: 734  TNAEESEMHFVRLLDDQSFEFMSTYPLDAFEYACSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRILVFIVEDA---KLQLIAEKETKGAVY 824
           5789************************************************************************...*************** PP
   S: 878  dlvklNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEsardynlewmsaveiln 971
           +l+++Ngkllaain++i+ly+w++++++++el++eC+++++ilaL+++tr+dfivVgDlm+s++Ll+yk++eg++eE+ardyn++wmsaveil+
   Q: 825  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 918
           ********************************************************************************************** PP
   S: 972  ddiflgaencgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifgtengeigvilrlrrellkflrnl 1065
           dd++lgaen++Nl++vkk+ ++g+tdeer +le+vge++lgefv++f++g+lv++ + ++e++++++vifgt+ng+igvi++l++e+++fl++l
   Q: 919  DDTYLGAENNFNLLTVKKN-SEGATDEERGRLEVVGEYHLGEFVNRFCHGSLVMRLP-DSEIGQIPTVIFGTVNGMIGVIASLPQEQYAFLEKL 1010
           *******************.***********************************98.************************************ PP
   S: 1066 estlkkvikrvakieHssyRsFetekrterasgfvdgdLiesilDlsrdkavdilkvlyekrwnskkevsveeivKlveelkrlh 1150
           +s+l+kvik+v++++H+++RsF++ekrt +a++f+dgdLies+lDlsr+k+++i+k++         +v+vee++K+veel+rlh
   Q: 1011 QSSLRKVIKGVGGLSHEQWRSFNNEKRTVEARNFLDGDLIESFLDLSRNKMEEISKSM---------NVQVEELCKRVEELTRLH 1086
           **********************************************************.........9***************98 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSWNYVVTA HKPTSVTHSC VGNFTSPQEL NLIVAKCTRI EIHLLTPQGL QPMLDVPIYG 60
RIATLELFRP HGETQDFLFI VTERHKFCVL QWDAESSELV TRAMGDVSDR IGRPTDNGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCTCAT GGAACTACGT CGTCACGGCT CACAAGCCCA CCAGTGTCAC TCACTCGTGC 60
GTCGGAAACT TCACCAGTCC CCAAGAGCTC AACCTCATCG TCGCGTATGA ACTCTCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	77.70	0.00e+00	1808.00
IUUC-Aml-002096	Ailuropoda melanoleuca	53.14	0.00e+00	1191.00
IUUC-Atr-002742	Amborella trichopoda	85.12	0.00e+00	1899.00
IUUC-Apl-003624	Anas platyrhynchos	52.51	0.00e+00	1149.00
IUUC-Aca-005085	Anolis carolinensis	53.14	0.00e+00	1185.00
IUUC-Aly-005857	Arabidopsis lyrata	97.24	0.00e+00	2170.00
IUUC-Ath-006658	Arabidopsis thaliana	96.60	0.00e+00	2159.00
IUUC-Ame-011643	Astyanax mexicanus	46.77	0.00e+00	986.00
IUUC-Bta-012494	Bos taurus	53.14	0.00e+00	1190.00
IUUC-Bci-013957	Botrytis cinerea	29.98	2.00e-113	403.00
IUUC-Bdi-014186	Brachypodium distachyon	80.92	0.00e+00	1817.00
IUUC-Bol-015922	Brassica oleracea	99.63	0.00e+00	2209.00
IUUC-Cel-018239	Caenorhabditis elegans	34.01	1.00e-178	620.00
IUUC-Cja-019165	Callithrix jacchus	53.05	0.00e+00	1188.00
IUUC-Cfa-020406	Canis familiaris	53.14	0.00e+00	1191.00
IUUC-Cpo-022154	Cavia porcellus	53.05	0.00e+00	1190.00
IUUC-Csa-024061	Chlorocebus sabaeus	53.05	0.00e+00	1188.00
IUUC-Cho-024554	Choloepus hoffmanni	48.78	3.00e-137	483.00
IUUC-Cin-025466	Ciona intestinalis	48.79	0.00e+00	1054.00
IUUC-Csv-026370	Ciona savignyi	47.68	0.00e+00	947.00
IUUC-Cme-027342	Cyanidioschyzon merolae	30.51	1.00e-135	477.00
IUUC-Dre-027448	Danio rerio	52.86	3.00e-164	571.00
IUUC-Dno-029794	Dasypus novemcinctus	53.56	0.00e+00	1134.00
IUUC-Ete-032913	Echinops telfairi	54.69	6.00e-82	298.00
IUUC-Eca-033777	Equus caballus	52.88	0.00e+00	1182.00
IUUC-Eeu-034900	Erinaceus europaeus	51.17	3.00e-168	585.00
IUUC-Fca-035869	Felis catus	53.14	0.00e+00	1191.00
IUUC-Fal-036777	Ficedula albicollis	52.92	0.00e+00	1177.00
IUUC-Gmo-038815	Gadus morhua	48.10	1.00e-155	543.00
IUUC-Gga-040995	Gallus gallus	52.97	0.00e+00	1184.00
IUUC-Gac-042390	Gasterosteus aculeatus	52.69	0.00e+00	1116.00
IUUC-Gma-042904	Glycine max	89.26	0.00e+00	1961.00
IUUC-Ggo-044891	Gorilla gorilla	52.92	0.00e+00	1185.00
IUUC-Hsa-046709	Homo sapiens	53.05	0.00e+00	1188.00
IUUC-Hvu-047504	Hordeum vulgare	81.10	0.00e+00	1834.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	53.23	0.00e+00	1192.00
IUUC-Kpa-049303	Komagataella pastoris	25.49	4.20e+00	26.20
IUUC-Lch-050565	Latimeria chalumnae	53.14	0.00e+00	1189.00
IUUC-Lpe-051260	Leersia perrieri	82.66	0.00e+00	1842.00
IUUC-Loc-052091	Lepisosteus oculatus	48.28	0.00e+00	798.00
IUUC-Laf-053502	Loxodonta africana	53.23	0.00e+00	1191.00
IUUC-Mcc-054802	Macaca mulatta	53.58	0.00e+00	1179.00
IUUC-Mtr-057743	Medicago truncatula	88.89	0.00e+00	1976.00
IUUC-Mga-059824	Meleagris gallopavo	52.64	0.00e+00	1098.00
IUUC-Mvi-060279	Microbotryum violaceum	28.68	2.00e-121	429.00
IUUC-Mmr-061215	Microcebus murinus	52.79	0.00e+00	1179.00
IUUC-Mdo-062028	Monodelphis domestica	51.13	0.00e+00	943.00
IUUC-Mmu-064327	Mus musculus	53.14	0.00e+00	1190.00
IUUC-Mac-065445	Musa acuminata	85.49	0.00e+00	1899.00
IUUC-Mpu-065814	Mustela putorius furo	51.31	0.00e+00	1127.00
IUUC-Mlu-067136	Myotis lucifugus	53.14	0.00e+00	1184.00
IUUC-Ncr-068620	Neurospora crassa	29.14	2.00e-120	426.00
IUUC-Nle-069566	Nomascus leucogenys	53.49	0.00e+00	1171.00
IUUC-Opr-070915	Ochotona princeps	51.94	0.00e+00	880.00
IUUC-Ont-071753	Oreochromis niloticus	53.05	0.00e+00	1184.00
IUUC-Oan-073187	Ornithorhynchus anatinus	53.56	0.00e+00	1079.00
IUUC-Ocu-074619	Oryctolagus cuniculus	53.14	0.00e+00	1192.00
IUUC-Oba-075091	Oryza barthii	79.24	0.00e+00	1241.00
IUUC-Obr-076425	Oryza brachyantha	82.87	0.00e+00	1847.00
IUUC-Ogu-078794	Oryza glumaepatula	82.84	0.00e+00	1852.00
IUUC-Oin-079725	Oryza indica	81.82	0.00e+00	1819.00
IUUC-Olo-080842	Oryza longistaminata	79.42	0.00e+00	1668.00
IUUC-Ome-081818	Oryza meridionalis	82.75	0.00e+00	1847.00
IUUC-Oni-082879	Oryza nivara	82.20	0.00e+00	1829.00
IUUC-Opu-083361	Oryza punctata	81.81	0.00e+00	1845.00
IUUC-Oru-084781	Oryza rufipogon	82.84	0.00e+00	1852.00
IUUC-Osa-086293	Oryza sativa	82.84	0.00e+00	1852.00
IUUC-Ola-086881	Oryzias latipes	52.43	0.00e+00	1168.00
IUUC-Olu-087674	Ostreococcus lucimarinus	55.83	0.00e+00	1164.00
IUUC-Oga-089056	Otolemur garnettii	53.05	0.00e+00	1189.00
IUUC-Oar-089457	Ovis aries	53.67	0.00e+00	1179.00
IUUC-Ptr-091179	Pan troglodytes	52.97	0.00e+00	1166.00
IUUC-Pan-092019	Papio anubis	52.91	0.00e+00	1181.00
IUUC-Psi-093407	Pelodiscus sinensis	52.97	0.00e+00	1160.00
IUUC-Pma-094272	Petromyzon marinus	53.07	0.00e+00	1078.00
IUUC-Pno-094864	Phaeosphaeria nodorum	30.13	8.00e-134	471.00
IUUC-Ppa-095885	Physcomitrella patens	80.18	0.00e+00	1744.00
IUUC-Pfo-096083	Poecilia formosa	53.10	0.00e+00	1182.00
IUUC-Pab-098652	Pongo abelii	51.35	0.00e+00	1094.00
IUUC-Pop-099593	Populus trichocarpa	89.34	0.00e+00	1979.00
IUUC-Pca-100189	Procavia capensis	52.00	0.00e+00	675.00
IUUC-Ppe-101987	Prunus persica	88.43	0.00e+00	1915.00
IUUC-Pva-102605	Pteropus vampyrus	52.97	0.00e+00	1184.00
IUUC-Rno-106004	Rattus norvegicus	53.05	0.00e+00	1189.00
IUUC-Sha-106726	Sarcophilus harrisii	51.99	0.00e+00	1068.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	29.91	2.00e-107	383.00
IUUC-Smo-108808	Selaginella moellendorffii	79.08	0.00e+00	1806.00
IUUC-Sit-109735	Setaria italica	82.50	0.00e+00	1846.00
IUUC-Sly-111520	Solanum lycopersicum	87.85	0.00e+00	1962.00
IUUC-Sbi-114539	Sorghum bicolor	79.69	0.00e+00	1813.00
IUUC-Ssc-116038	Sus scrofa	53.05	0.00e+00	1188.00
IUUC-Tgu-117512	Taeniopygia guttata	52.88	0.00e+00	1177.00
IUUC-Tru-117593	Takifugu rubripes	52.14	0.00e+00	1164.00
IUUC-Tni-120551	Tetraodon nigroviridis	49.16	0.00e+00	920.00
IUUC-Tca-121505	Theobroma cacao	90.35	0.00e+00	2000.00
IUUC-Tae-124186	Triticum aestivum	81.10	0.00e+00	1833.00
IUUC-Tur-126451	Triticum urartu	80.30	0.00e+00	1634.00
IUUC-Tme-127057	Tuber melanosporum	30.99	3.00e-127	449.00
IUUC-Ttr-128891	Tursiops truncatus	51.17	0.00e+00	744.00
IUUC-Vvi-131033	Vitis vinifera	89.72	0.00e+00	2000.00
IUUC-Xtr-131987	Xenopus tropicalis	52.61	0.00e+00	1165.00
IUUC-Xma-134117	Xiphophorus maculatus	52.17	0.00e+00	1153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence