iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121367

Ensembl Protein ID

EOY00412

UniProt Accession

A0A061E7R4; A0A061E7R4_THECC

Genbank Protein ID

EOY00412.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001880

Gene Name

TCM_010278

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_010278	EOY00412	EOY00412

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-08	35.2	149	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C H+fh dC+  w       + + +CPlCr
   Q: 149  CAVCLCEFleQDKLRLLPmCSHAFHIDCIDTW------LMSNSTCPLCR 191
           ********99555*******************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSWIHSQIRI KDGPLSYHHH SLLSSYSSPS SSPSLPYNSD YQKQLNPSSS SSSASKISPV 60
VLFIIVVLAV IFFISGLLHL LVRFLMKQRS PSSVSESNRY PELSGSDAFQ RQLQQLFHLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTCCTCCG TCCCTCTATC AAACAAGCAA AGCGTTCCCT TCCTAATATA AAAGAATTAA 60
AATCCCTCAA TGGACTAAAT GGGGTTCATT GCATCACATA CTGAATCGAC TTATTAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001193	Ailuropoda melanoleuca	43.12	3.00e-18	86.30
IUUC-Apl-003969	Anas platyrhynchos	43.69	2.00e-16	80.10
IUUC-Aly-006330	Arabidopsis lyrata	61.95	2.00e-88	318.00
IUUC-Ath-006861	Arabidopsis thaliana	63.33	6.00e-85	306.00
IUUC-Ame-011097	Astyanax mexicanus	37.29	3.00e-15	76.30
IUUC-Bta-013113	Bos taurus	40.00	3.00e-16	79.70
IUUC-Bdi-014382	Brachypodium distachyon	52.75	1.00e-63	235.00
IUUC-Bol-015919	Brassica oleracea	63.20	3.00e-87	314.00
IUUC-Bra-017741	Brassica rapa	63.70	2.00e-86	311.00
IUUC-Cja-018860	Callithrix jacchus	40.17	7.00e-17	81.60
IUUC-Cre-022755	Chlamydomonas reinhardtii	55.81	6.00e-13	64.30
IUUC-Csa-023242	Chlorocebus sabaeus	40.17	7.00e-17	81.60
IUUC-Dno-029606	Dasypus novemcinctus	43.48	2.00e-16	80.10
IUUC-Ete-033099	Echinops telfairi	44.57	6.00e-17	81.60
IUUC-Eca-033976	Equus caballus	43.48	2.00e-16	80.10
IUUC-Eeu-034964	Erinaceus europaeus	39.83	3.00e-17	82.80
IUUC-Fca-035662	Felis catus	43.48	2.00e-16	80.10
IUUC-Fal-036996	Ficedula albicollis	43.48	2.00e-16	79.70
IUUC-Gga-040816	Gallus gallus	43.69	2.00e-16	80.10
IUUC-Gac-041767	Gasterosteus aculeatus	41.94	5.00e-15	75.50
IUUC-Gma-043709	Glycine max	65.19	1.00e-99	355.00
IUUC-Ggo-044754	Gorilla gorilla	40.17	6.00e-17	82.00
IUUC-Hsa-045776	Homo sapiens	40.17	6.00e-17	82.00
IUUC-Hvu-047144	Hordeum vulgare	53.68	1.00e-65	242.00
IUUC-Itr-048044	Ictidomys tridecemlineatus	40.00	2.00e-16	79.70
IUUC-Lch-050178	Latimeria chalumnae	43.12	3.00e-16	79.30
IUUC-Lpe-051339	Leersia perrieri	51.97	5.00e-72	264.00
IUUC-Loc-052124	Lepisosteus oculatus	40.00	2.00e-15	76.60
IUUC-Laf-054328	Loxodonta africana	40.00	2.00e-16	80.10
IUUC-Mcc-054739	Macaca mulatta	40.17	6.00e-17	81.60
IUUC-Meu-056359	Macropus eugenii	44.66	8.00e-17	81.30
IUUC-Mtr-058341	Medicago truncatula	61.78	2.00e-95	341.00
IUUC-Mga-059838	Meleagris gallopavo	43.69	2.00e-16	80.10
IUUC-Mmr-060608	Microcebus murinus	40.17	4.00e-17	82.40
IUUC-Mdo-061961	Monodelphis domestica	44.66	1.00e-16	80.90
IUUC-Mmu-064278	Mus musculus	39.83	2.00e-17	83.20
IUUC-Mac-064867	Musa acuminata	48.44	2.00e-58	218.00
IUUC-Mpu-065838	Mustela putorius furo	42.20	7.00e-18	84.70
IUUC-Mlu-066930	Myotis lucifugus	39.34	1.00e-17	84.30
IUUC-Nle-069311	Nomascus leucogenys	39.66	3.00e-16	79.30
IUUC-Oan-073036	Ornithorhynchus anatinus	43.69	3.00e-16	79.30
IUUC-Ocu-073795	Oryctolagus cuniculus	39.83	3.00e-17	82.40
IUUC-Oba-075878	Oryza barthii	54.26	6.00e-73	266.00
IUUC-Ogl-077906	Oryza glaberrima	53.90	4.00e-72	264.00
IUUC-Ogu-078031	Oryza glumaepatula	54.26	6.00e-73	266.00
IUUC-Olo-080996	Oryza longistaminata	54.26	6.00e-73	266.00
IUUC-Ome-081784	Oryza meridionalis	54.26	1.00e-72	266.00
IUUC-Oni-082697	Oryza nivara	54.26	6.00e-73	266.00
IUUC-Opu-083782	Oryza punctata	54.09	7.00e-72	263.00
IUUC-Oru-084352	Oryza rufipogon	54.26	6.00e-73	266.00
IUUC-Osa-085627	Oryza sativa	54.26	6.00e-73	266.00
IUUC-Ola-087461	Oryzias latipes	46.05	1.00e-14	74.30
IUUC-Oga-088022	Otolemur garnettii	37.50	4.00e-17	82.00
IUUC-Oar-089348	Ovis aries	40.00	3.00e-16	79.70
IUUC-Ptr-090604	Pan troglodytes	40.17	6.00e-17	81.60
IUUC-Pan-092322	Papio anubis	40.17	6.00e-17	81.60
IUUC-Psi-093936	Pelodiscus sinensis	43.69	6.00e-16	78.20
IUUC-Ppa-095806	Physcomitrella patens	58.33	3.00e-38	152.00
IUUC-Pfo-096616	Poecilia formosa	46.05	1.00e-14	73.90
IUUC-Pab-098671	Pongo abelii	40.17	5.00e-17	82.00
IUUC-Ppe-101745	Prunus persica	70.94	1.00e-114	405.00
IUUC-Pva-102709	Pteropus vampyrus	39.32	5.00e-16	78.60
IUUC-Rno-105759	Rattus norvegicus	40.17	7.00e-17	81.60
IUUC-Sly-111633	Solanum lycopersicum	60.90	7.00e-91	326.00
IUUC-Stu-112810	Solanum tuberosum	60.49	9.00e-93	332.00
IUUC-Sbi-114772	Sorghum bicolor	54.52	2.00e-76	278.00
IUUC-Ssc-115738	Sus scrofa	43.48	2.00e-16	80.10
IUUC-Tgu-117205	Taeniopygia guttata	43.69	3.00e-16	79.70
IUUC-Tsy-119421	Tarsius syrichta	40.22	5.00e-13	68.60
IUUC-Tni-120299	Tetraodon nigroviridis	37.29	6.00e-15	75.10
IUUC-Tae-124138	Triticum aestivum	53.85	5.00e-66	243.00
IUUC-Tbe-127543	Tupaia belangeri	39.02	2.00e-17	83.20
IUUC-Vpa-130058	Vicugna pacos	43.48	2.00e-16	80.10
IUUC-Vvi-130961	Vitis vinifera	74.66	6.00e-104	370.00
IUUC-Xtr-132663	Xenopus tropicalis	42.72	5.00e-16	78.60
IUUC-Xma-133076	Xiphophorus maculatus	41.94	7.00e-15	75.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence