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Tag Content
UUCD2 ID IUUC-Pab-097805
UUCD1 version UUC-PoA-00845
Ensembl Protein ID ENSPPYP00000021870.1
UniProt Accession H2PT42; H2PT42_PONAB
Genbank Protein ID ENSPPYP00000021870
Protein Name U4/U6 small nuclear ribonucleoprotein Prp4
Genbank Nucleotide ID ABGA01364011
Gene Name PRPF4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPPYG00000019516.1 ENSPPYT00000022766.1 ENSPPYP00000021869.1
ENSPPYG00000019516.1 ENSPPYT00000022767.1 ENSPPYP00000021870.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.80e-34 114.5 391 429
UBD/Beta-Prp 1.20e-52 179.1 219 463
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++++f ++  ++++Gs+D+t+kvWDlr+ +++ 
   Q: 391  GHLKEIYGINFsPNgYHIATGSGDNTCKVWDLRQRRCVY 429
           7999********77799*****************99985 PP
   

   UBD/Beta-Prp
   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvht 89
           ++ +i+  +fsp++++lat++++g  k+w+v + +ll++l gh+  v a+ f+p++          l++++ D+ +k w+l++ ++v  
   Q: 219  DDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTvsldqkdvNLASCAADGSVK-WSLDSDEPVAD 306
           67899999********************************************99988888888999***********.9********** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           ++gh+ +v  + ++psg +l ++  dr  r+wdle ++++    ++h+  v +  +h+dg+l  +G+lD + r+Wdl+tg+++  l+g 
   Q: 307  IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL--HQEHSMGV-YDIFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG- 391
           ************************************99996..45555444.44488989**************************99. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW 249
           h + +y ++f++ng ++++gs d+t k+wdl++ +cv+t  +h++ v+ v+f   ++++l++g+ D++ +iW
   Q: 392  HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEpIHGNFLLTGAYDNTAKIW 463
           *****************************************************88***************** PP
   
Organism Pongo abelii
Protein Sequence
(Fasta)
ATKTKAPDDL VAPVVKKPHI YYGSLEEKER ERLAKGESGI LGKEGLKAGI EAGNINITSG 60
KMQIVSPFIM SKNFLFFFFF RQSRSKNLKI SQFERIVKAC SHLRGALITV FKTVLNLIST 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pab-097805|E3,WD_repeat;UBD,Beta-Prp|Pongo abelii
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCTGAAAGGG AGTGCTCGGA TTTCGCTGGG GCCTCGCGGC TCCAGAGCCC AGCATGGCTT 60
CCTCGCGAGC CTCCTCCACG GTACGGAGCC CGGGAACTCA GCTCACTCTG GCAGGGAGCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pab-097805|E3,WD_repeat;UBD,Beta-Prp|Pongo abelii
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0015030--C:Cajal body
GO:0016607--C:nuclear speck
GO:0071001--C:U4/U6 snRNP
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000771 Aegilops tauschii 45.66 2.00e-83 302.00
IUUC-Aml-001737 Ailuropoda melanoleuca 89.53 0.00e+00 880.00
IUUC-Atr-002828 Amborella trichopoda 50.17 1.00e-85 310.00
IUUC-Apl-003723 Anas platyrhynchos 80.86 0.00e+00 817.00
IUUC-Aca-004972 Anolis carolinensis 81.05 0.00e+00 762.00
IUUC-Aly-006531 Arabidopsis lyrata 45.25 7.00e-82 297.00
IUUC-Ath-007367 Arabidopsis thaliana 45.66 2.00e-90 326.00
IUUC-Ago-007893 Ashbya gossypii 36.04 2.00e-43 169.00
IUUC-Acl-008236 Aspergillus clavatus 37.34 3.00e-73 269.00
IUUC-Afl-008522 Aspergillus flavus 39.29 1.00e-79 290.00
IUUC-Afu-008904 Aspergillus fumigatus 37.91 5.00e-76 278.00
IUUC-Ani-009198 Aspergillus nidulans 38.72 7.00e-79 287.00
IUUC-Ang-009662 Aspergillus niger 42.50 2.00e-81 296.00
IUUC-Aor-009881 Aspergillus oryzae 39.29 1.00e-79 290.00
IUUC-Ate-010333 Aspergillus terreus 37.40 4.00e-73 268.00
IUUC-Ame-011697 Astyanax mexicanus 71.88 0.00e+00 694.00
IUUC-Bgr-012254 Blumeria graminis 37.70 5.00e-73 268.00
IUUC-Bta-012615 Bos taurus 89.06 0.00e+00 850.00
IUUC-Bci-013720 Botrytis cinerea 38.03 3.00e-74 272.00
IUUC-Bdi-014302 Brachypodium distachyon 46.50 8.00e-90 324.00
IUUC-Bol-015594 Brassica oleracea 45.28 9.00e-83 301.00
IUUC-Bra-017465 Brassica rapa 45.00 1.00e-82 300.00
IUUC-Cel-018632 Caenorhabditis elegans 45.07 4.00e-95 341.00
IUUC-Cja-019747 Callithrix jacchus 89.65 0.00e+00 894.00
IUUC-Cfa-020288 Canis familiaris 89.53 0.00e+00 882.00
IUUC-Cpo-021440 Cavia porcellus 87.38 0.00e+00 863.00
IUUC-Cre-022716 Chlamydomonas reinhardtii 46.48 2.00e-80 292.00
IUUC-Csa-023139 Chlorocebus sabaeus 98.80 0.00e+00 680.00
IUUC-Cho-024481 Choloepus hoffmanni 87.94 0.00e+00 734.00
IUUC-Cin-025106 Ciona intestinalis 52.63 3.00e-146 511.00
IUUC-Csv-026087 Ciona savignyi 51.39 1.00e-144 506.00
IUUC-Cgl-026538 Colletotrichum gloeosporioides 32.89 3.00e-68 253.00
IUUC-Cne-026793 Cryptococcus neoformans 41.00 4.00e-88 318.00
IUUC-Dre-028723 Danio rerio 70.69 0.00e+00 684.00
IUUC-Dno-029299 Dasypus novemcinctus 88.93 0.00e+00 877.00
IUUC-Dor-030345 Dipodomys ordii 100.00 5.00e-69 254.00
IUUC-Dse-031562 Dothistroma septosporum 37.37 6.00e-74 271.00
IUUC-Dme-031783 Drosophila melanogaster 58.54 2.00e-117 416.00
IUUC-Ete-032669 Echinops telfairi 87.52 0.00e+00 873.00
IUUC-Eca-033566 Equus caballus 89.50 0.00e+00 876.00
IUUC-Eeu-034524 Erinaceus europaeus 97.91 5.00e-141 493.00
IUUC-Fca-036215 Felis catus 89.53 0.00e+00 880.00
IUUC-Fal-037018 Ficedula albicollis 79.02 0.00e+00 669.00
IUUC-Fox-037936 Fusarium oxysporum 36.81 3.00e-69 256.00
IUUC-Fso-038366 Fusarium solani 37.08 4.00e-68 251.00
IUUC-Gmo-038966 Gadus morhua 66.39 9.00e-134 469.00
IUUC-Ggr-039942 Gaeumannomyces graminis 36.81 2.00e-67 249.00
IUUC-Gga-040797 Gallus gallus 81.24 0.00e+00 804.00
IUUC-Gac-042598 Gasterosteus aculeatus 61.23 1.00e-158 553.00
IUUC-Gma-044220 Glycine max 46.63 6.00e-89 321.00
IUUC-Ggo-044682 Gorilla gorilla 88.93 0.00e+00 867.00
IUUC-Hsa-045804 Homo sapiens 89.26 0.00e+00 889.00
IUUC-Hvu-047567 Hordeum vulgare 45.04 1.00e-83 303.00
IUUC-Itr-047882 Ictidomys tridecemlineatus 89.06 0.00e+00 888.00
IUUC-Kpa-049369 Komagataella pastoris 34.33 4.00e-57 215.00
IUUC-Lch-050074 Latimeria chalumnae 71.48 0.00e+00 694.00
IUUC-Lpe-051333 Leersia perrieri 45.94 6.00e-84 304.00
IUUC-Loc-052164 Lepisosteus oculatus 73.07 0.00e+00 717.00
IUUC-Lma-053088 Leptosphaeria maculans 36.81 5.00e-65 241.00
IUUC-Laf-053460 Loxodonta africana 89.28 0.00e+00 886.00
IUUC-Mcc-055859 Macaca mulatta 89.53 0.00e+00 880.00
IUUC-Meu-056134 Macropus eugenii 85.13 0.00e+00 855.00
IUUC-Mor-057251 Magnaporthe oryzae 36.81 4.00e-68 252.00
IUUC-Mpo-057375 Magnaporthe poae 40.00 2.00e-47 181.00
IUUC-Mtr-057656 Medicago truncatula 47.52 2.00e-82 299.00
IUUC-Mla-059145 Melampsora laricipopulina 41.50 8.00e-84 303.00
IUUC-Mga-059855 Meleagris gallopavo 79.65 0.00e+00 800.00
IUUC-Mvi-060372 Microbotryum violaceum 41.22 2.00e-86 313.00
IUUC-Mmr-060826 Microcebus murinus 88.74 0.00e+00 876.00
IUUC-Mdo-062119 Monodelphis domestica 86.03 0.00e+00 842.00
IUUC-Mmu-063351 Mus musculus 89.13 0.00e+00 877.00
IUUC-Mac-064846 Musa acuminata 46.67 2.00e-79 289.00
IUUC-Mpu-066006 Mustela putorius furo 89.53 0.00e+00 880.00
IUUC-Mlu-067398 Myotis lucifugus 89.13 0.00e+00 878.00
IUUC-Nfi-068399 Neosartorya fischeri 38.90 3.00e-80 292.00
IUUC-Ncr-068711 Neurospora crassa 37.08 1.00e-68 253.00
IUUC-Nle-069982 Nomascus leucogenys 89.65 0.00e+00 894.00
IUUC-Opr-070596 Ochotona princeps 88.87 0.00e+00 889.00
IUUC-Ont-072374 Oreochromis niloticus 68.85 0.00e+00 672.00
IUUC-Oan-073166 Ornithorhynchus anatinus 93.35 0.00e+00 725.00
IUUC-Ocu-074371 Oryctolagus cuniculus 89.33 0.00e+00 879.00
IUUC-Oba-075083 Oryza barthii 45.38 6.00e-84 304.00
IUUC-Obr-076405 Oryza brachyantha 45.38 6.00e-83 301.00
IUUC-Ogl-077683 Oryza glaberrima 45.38 9.00e-84 304.00
IUUC-Ogu-078486 Oryza glumaepatula 45.66 1.00e-83 303.00
IUUC-Oin-079679 Oryza indica 45.38 8.00e-87 314.00
IUUC-Olo-080243 Oryza longistaminata 45.66 2.00e-83 302.00
IUUC-Ome-081230 Oryza meridionalis 45.38 1.00e-86 313.00
IUUC-Oni-082961 Oryza nivara 45.38 1.00e-86 313.00
IUUC-Opu-083189 Oryza punctata 45.10 6.00e-82 298.00
IUUC-Oru-084353 Oryza rufipogon 45.38 1.00e-86 313.00
IUUC-Osa-085458 Oryza sativa 45.38 1.00e-86 313.00
IUUC-Ola-086940 Oryzias latipes 67.00 0.00e+00 640.00
IUUC-Olu-087580 Ostreococcus lucimarinus 36.39 4.00e-54 205.00
IUUC-Oga-088703 Otolemur garnettii 84.38 0.00e+00 834.00
IUUC-Oar-089829 Ovis aries 89.26 0.00e+00 853.00
IUUC-Ptr-090838 Pan troglodytes 89.26 0.00e+00 889.00
IUUC-Pan-092261 Papio anubis 89.08 0.00e+00 889.00
IUUC-Psi-093020 Pelodiscus sinensis 81.45 0.00e+00 820.00
IUUC-Pno-094858 Phaeosphaeria nodorum 37.11 8.00e-64 237.00
IUUC-Ppa-095531 Physcomitrella patens 49.30 5.00e-99 354.00
IUUC-Pfo-096812 Poecilia formosa 61.74 1.00e-169 589.00
IUUC-Pop-100051 Populus trichocarpa 48.46 2.00e-89 323.00
IUUC-Pca-100152 Procavia capensis 89.08 0.00e+00 887.00
IUUC-Ppe-101244 Prunus persica 48.18 6.00e-95 340.00
IUUC-Pva-102529 Pteropus vampyrus 85.94 0.00e+00 844.00
IUUC-Pgr-103550 Puccinia graminis 37.50 2.00e-84 306.00
IUUC-Ptt-103951 Puccinia triticina 36.68 1.00e-65 244.00
IUUC-Pte-104151 Pyrenophora teres 36.84 7.00e-64 238.00
IUUC-Pyt-104571 Pyrenophora triticirepentis 37.37 5.00e-65 241.00
IUUC-Rno-105747 Rattus norvegicus 88.93 0.00e+00 875.00
IUUC-Sce-106418 Saccharomyces cerevisiae 35.60 3.00e-58 219.00
IUUC-Sha-107334 Sarcophilus harrisii 85.94 0.00e+00 850.00
IUUC-Sja-107794 Schizosaccharomyces japonicus 34.07 3.00e-53 202.00
IUUC-Spo-108189 Schizosaccharomyces pombe 40.00 9.00e-65 240.00
IUUC-Ssl-108550 Sclerotinia sclerotiorum 37.23 2.00e-72 266.00
IUUC-Smo-109578 Selaginella moellendorffii 44.36 9.00e-94 337.00
IUUC-Sit-110102 Setaria italica 45.94 8.00e-85 307.00
IUUC-Sly-111668 Solanum lycopersicum 48.88 2.00e-96 345.00
IUUC-Stu-111928 Solanum tuberosum 48.31 1.00e-95 343.00
IUUC-Sar-113266 Sorex araneus 79.45 0.00e+00 735.00
IUUC-Sbi-114134 Sorghum bicolor 45.66 4.00e-85 308.00
IUUC-Sre-115114 Sporisorium reilianum 43.82 2.00e-87 316.00
IUUC-Ssc-115443 Sus scrofa 89.53 0.00e+00 880.00
IUUC-Tgu-117157 Taeniopygia guttata 80.53 0.00e+00 755.00
IUUC-Tru-118587 Takifugu rubripes 66.60 0.00e+00 643.00
IUUC-Tsy-119157 Tarsius syrichta 98.72 0.00e+00 758.00
IUUC-Tni-120427 Tetraodon nigroviridis 67.13 0.00e+00 650.00
IUUC-Tca-121368 Theobroma cacao 46.80 2.00e-92 333.00
IUUC-Tre-122074 Trichoderma reesei 36.29 2.00e-64 239.00
IUUC-Tvi-122349 Trichoderma virens 35.51 2.00e-63 236.00
IUUC-Tae-125651 Triticum aestivum 45.66 1.00e-83 303.00
IUUC-Tur-125983 Triticum urartu 47.62 2.00e-77 281.00
IUUC-Tme-126951 Tuber melanosporum 40.99 9.00e-83 300.00
IUUC-Tbe-128136 Tupaia belangeri 80.47 0.00e+00 778.00
IUUC-Ttr-129169 Tursiops truncatus 88.45 2.00e-131 461.00
IUUC-Uma-129399 Ustilago maydis 44.50 3.00e-91 328.00
IUUC-Vda-129842 Verticillium dahliae 36.53 1.00e-68 254.00
IUUC-Vpa-130440 Vicugna pacos 89.06 0.00e+00 889.00
IUUC-Vvi-131075 Vitis vinifera 49.72 2.00e-96 346.00
IUUC-Xtr-132713 Xenopus tropicalis 48.03 1.00e-103 369.00
IUUC-Xma-133002 Xiphophorus maculatus 78.83 1.00e-164 572.00
IUUC-Yli-134569 Yarrowia lipolytica 35.56 3.00e-61 229.00
IUUC-Zma-135799 Zea mays 43.42 9.00e-82 297.00
Created Date 25-Jun-2017

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