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Tag Content
UUCD2 ID IUUC-Pop-099945
UUCD1 version UUC-PoT-00533
Ensembl Protein ID POPTR_0002s12590.1
UniProt Accession B9GNU5; B9GNU5_POPTR
Genbank Protein ID EEE80445.2
Protein Name Zinc finger family protein
Genbank Nucleotide ID CM000338
Gene Name POPTRDRAFT_754958; POPTR_0002s12590g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0002s12590 POPTR_0002s12590.2 POPTR_0002s12590.2
POPTR_0002s12590 POPTR_0002s12590.1 POPTR_0002s12590.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 8.20e-06 27.4 718 759
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   +d + +l+CgH fha C+++w     +  k++ CP+C+
   Q: 718  CCICQEEYndgED-LGTLDCGHDFHAGCVKQW-----LMHKNW-CPICK 759
           ********55444.8899**************.....556666.****6 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MQGQRSIIGS LPETLDFDHG STSGNAIIDQ QICLSNMRNP AENRLTEFML SPSRMNNPYA 60
NSIDQERQNL SGWSLGEPSS SGQQNQASHD DRKLEHGWSS SASSSAGAGP RLEERRYEPT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099945|E3,RING|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCATATCTC ATATCCTCCT CCTCCTCTTC CCTTCTCCCC CTCTCTCACG CTCTCTCTCT 60
CCCCCCCTCT CTCTCTCCTT TCTTTCGGTG AGGGTTTTGT TTTTATTTAT TTTTCTCTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099945|E3,RING|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
KEGG pop:POPTR_0002s12590g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001791 Ailuropoda melanoleuca 39.39 1.00e-14 73.20
IUUC-Aca-005299 Anolis carolinensis 41.41 1.00e-14 73.60
IUUC-Aly-005944 Arabidopsis lyrata 36.36 4.00e-102 364.00
IUUC-Ath-007036 Arabidopsis thaliana 34.70 3.00e-81 295.00
IUUC-Ame-011948 Astyanax mexicanus 40.82 2.00e-15 76.30
IUUC-Bta-012470 Bos taurus 39.39 3.00e-14 72.40
IUUC-Bdi-014368 Brachypodium distachyon 58.92 4.00e-56 212.00
IUUC-Bol-015592 Brassica oleracea 31.82 4.00e-69 255.00
IUUC-Cja-019798 Callithrix jacchus 42.42 3.00e-15 75.50
IUUC-Cfa-020297 Canis familiaris 39.39 2.00e-14 72.80
IUUC-Cpo-022225 Cavia porcellus 42.42 3.00e-15 75.50
IUUC-Csa-024018 Chlorocebus sabaeus 42.42 2.00e-15 75.50
IUUC-Dre-028365 Danio rerio 40.82 6.00e-15 74.30
IUUC-Dno-029962 Dasypus novemcinctus 39.39 3.00e-14 72.00
IUUC-Eca-033911 Equus caballus 39.39 1.00e-14 73.20
IUUC-Fca-035641 Felis catus 39.39 2.00e-14 73.20
IUUC-Gmo-039613 Gadus morhua 38.78 8.00e-15 73.60
IUUC-Gac-042544 Gasterosteus aculeatus 41.84 3.00e-15 75.10
IUUC-Gma-042748 Glycine max 48.97 1.00e-161 562.00
IUUC-Ggo-044631 Gorilla gorilla 42.42 3.00e-15 75.50
IUUC-Hsa-046864 Homo sapiens 42.42 2.00e-15 75.50
IUUC-Itr-048602 Ictidomys tridecemlineatus 42.42 3.00e-15 75.50
IUUC-Lch-049656 Latimeria chalumnae 40.40 6.00e-14 71.20
IUUC-Loc-052046 Lepisosteus oculatus 41.41 5.00e-16 77.80
IUUC-Laf-053554 Loxodonta africana 39.39 5.00e-14 69.70
IUUC-Mcc-055198 Macaca mulatta 42.42 2.00e-15 75.90
IUUC-Mtr-057649 Medicago truncatula 47.11 1.00e-145 509.00
IUUC-Mmr-061389 Microcebus murinus 39.39 2.00e-14 72.40
IUUC-Mdo-062317 Monodelphis domestica 40.40 2.00e-14 72.40
IUUC-Mmu-063102 Mus musculus 42.42 2.00e-15 76.30
IUUC-Mpu-066793 Mustela putorius furo 39.39 2.00e-14 72.40
IUUC-Mlu-067464 Myotis lucifugus 34.58 6.00e-11 62.80
IUUC-Nle-069235 Nomascus leucogenys 42.42 4.00e-15 75.50
IUUC-Opr-070646 Ochotona princeps 39.39 2.00e-14 72.40
IUUC-Ont-072005 Oreochromis niloticus 43.30 1.00e-16 80.10
IUUC-Oan-072924 Ornithorhynchus anatinus 39.39 2.00e-13 69.70
IUUC-Ocu-074718 Oryctolagus cuniculus 42.42 2.00e-15 75.90
IUUC-Ola-087046 Oryzias latipes 42.86 8.00e-16 77.00
IUUC-Oga-087993 Otolemur garnettii 42.42 2.00e-15 76.30
IUUC-Oar-089588 Ovis aries 39.39 2.00e-14 72.80
IUUC-Ptr-091341 Pan troglodytes 42.42 2.00e-15 75.50
IUUC-Pan-091775 Papio anubis 42.42 2.00e-15 75.50
IUUC-Pfo-096103 Poecilia formosa 42.86 9.00e-16 77.00
IUUC-Pab-097885 Pongo abelii 38.54 5.00e-13 69.70
IUUC-Pca-100561 Procavia capensis 35.24 3.00e-12 67.00
IUUC-Ppe-101513 Prunus persica 56.81 0.00e+00 739.00
IUUC-Pva-102801 Pteropus vampyrus 41.41 5.00e-15 74.70
IUUC-Rno-105973 Rattus norvegicus 42.42 2.00e-15 76.30
IUUC-Sha-107027 Sarcophilus harrisii 39.39 8.00e-14 70.90
IUUC-Sly-111039 Solanum lycopersicum 42.91 4.00e-127 447.00
IUUC-Stu-112006 Solanum tuberosum 40.30 1.00e-111 396.00
IUUC-Sar-113383 Sorex araneus 39.39 2.00e-14 72.40
IUUC-Ssc-116357 Sus scrofa 39.39 2.00e-14 72.40
IUUC-Tru-118133 Takifugu rubripes 42.86 2.00e-15 76.30
IUUC-Tni-120104 Tetraodon nigroviridis 43.30 1.00e-16 79.70
IUUC-Tca-121625 Theobroma cacao 52.84 0.00e+00 645.00
IUUC-Vpa-130177 Vicugna pacos 39.39 4.00e-14 70.50
IUUC-Vvi-131306 Vitis vinifera 56.44 0.00e+00 692.00
Created Date 25-Jun-2017

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