iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012536

Ensembl Protein ID

ENSBTAP00000002140.4

UniProt Accession

E1BBS1; E1BBS1_BOVIN

Genbank Protein ID

ENSBTAP00000002140

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02054900

Gene Name

PHF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000001634.5	ENSBTAT00000002140.4	ENSBTAP00000002140.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.30e-10	39.2	89	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek.slveCekCrewfHpaClklsveeelpnsek.wiCpkCr 52
            C vC++++      lv CekCr+++H++C+ + +  + +++ + w C++C 
   Q: 89   LCCVCRSETVVPGnRLVSCEKCRHAYHQDCHVPRAPAPGEGEGAsWVCRQCV 140
           588***999876459*******************55555555558******7 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAQPPRLSRS GAPPLWDPAS PAPTSGPRPR LWEGQDVLAR WTDGLLYLGT IKKVDSAREV 60
CLVQFEDDSQ FLVLWKDISP AALPGEELLC CVCRSETVVP GNRLVSCEKC RHAYHQDCHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGGCCTGG GGACCCCCCG GTCTCTGCCT GCACGCCCCC CCGACGCCCA GCCGTGCCCT 60
CCCCGCGCGG GGGTTTCACC TCAGTCTCCC ACGTCTGCCT CTGCCCGGCT CCCGGCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025894--Mtf2_C_dom
IPR031202--PHF1
IPR002999--Tudor
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF14061--Mtf2_C
PF00628--PHD

SMART

SM00249--PHD
SM00333--TUDOR

Gene Ontology

GO:0035098--C:ESC/E(Z) complex
GO:0035861--C:site of double-strand break
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0061086--P:negative regulation of histone H3-K27 methylation
GO:0061087--P:positive regulation of histone H3-K27 methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001720	Ailuropoda melanoleuca	98.24	0.00e+00	927.00
IUUC-Ame-011369	Astyanax mexicanus	47.97	6.00e-127	447.00
IUUC-Cja-019049	Callithrix jacchus	96.83	0.00e+00	894.00
IUUC-Cfa-021211	Canis familiaris	97.71	0.00e+00	923.00
IUUC-Cpo-021980	Cavia porcellus	94.38	0.00e+00	904.00
IUUC-Csa-023154	Chlorocebus sabaeus	96.47	0.00e+00	918.00
IUUC-Dre-028597	Danio rerio	47.01	2.00e-129	455.00
IUUC-Dor-030431	Dipodomys ordii	95.25	0.00e+00	880.00
IUUC-Ete-032589	Echinops telfairi	88.31	0.00e+00	889.00
IUUC-Eca-034315	Equus caballus	98.41	0.00e+00	951.00
IUUC-Gmo-039382	Gadus morhua	65.36	5.00e-116	410.00
IUUC-Gac-041748	Gasterosteus aculeatus	65.90	5.00e-118	417.00
IUUC-Ggo-044966	Gorilla gorilla	97.18	0.00e+00	918.00
IUUC-Hsa-046188	Homo sapiens	96.83	0.00e+00	884.00
IUUC-Itr-048249	Ictidomys tridecemlineatus	96.47	0.00e+00	909.00
IUUC-Lch-050336	Latimeria chalumnae	52.76	1.00e-148	519.00
IUUC-Laf-053729	Loxodonta africana	91.96	0.00e+00	856.00
IUUC-Mcc-055486	Macaca mulatta	96.47	0.00e+00	918.00
IUUC-Meu-055933	Macropus eugenii	93.46	0.00e+00	659.00
IUUC-Mmr-061114	Microcebus murinus	95.77	0.00e+00	922.00
IUUC-Mdo-062033	Monodelphis domestica	85.09	0.00e+00	771.00
IUUC-Mmu-063482	Mus musculus	91.71	0.00e+00	923.00
IUUC-Mpu-065725	Mustela putorius furo	97.88	0.00e+00	939.00
IUUC-Mlu-067243	Myotis lucifugus	94.89	0.00e+00	909.00
IUUC-Nle-069759	Nomascus leucogenys	96.65	0.00e+00	894.00
IUUC-Ont-071655	Oreochromis niloticus	52.16	1.00e-121	429.00
IUUC-Oan-073043	Ornithorhynchus anatinus	56.14	2.00e-70	258.00
IUUC-Ocu-073930	Oryctolagus cuniculus	97.18	0.00e+00	901.00
IUUC-Oga-088161	Otolemur garnettii	94.53	0.00e+00	899.00
IUUC-Oar-089582	Ovis aries	99.65	0.00e+00	903.00
IUUC-Ptr-090810	Pan troglodytes	96.83	0.00e+00	937.00
IUUC-Pan-091980	Papio anubis	96.47	0.00e+00	918.00
IUUC-Pfo-097260	Poecilia formosa	60.06	6.00e-119	420.00
IUUC-Pab-098556	Pongo abelii	96.83	0.00e+00	894.00
IUUC-Pca-100360	Procavia capensis	95.41	0.00e+00	818.00
IUUC-Pva-102900	Pteropus vampyrus	96.64	0.00e+00	894.00
IUUC-Rno-105536	Rattus norvegicus	92.59	0.00e+00	907.00
IUUC-Sha-107357	Sarcophilus harrisii	85.64	0.00e+00	822.00
IUUC-Ssc-116070	Sus scrofa	95.94	0.00e+00	858.00
IUUC-Tsy-119247	Tarsius syrichta	98.10	0.00e+00	632.00
IUUC-Tni-120027	Tetraodon nigroviridis	55.34	8.00e-100	357.00
IUUC-Tbe-127780	Tupaia belangeri	91.18	0.00e+00	835.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence