iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114616

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G029300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g003030	Sb06g003030.1	Sb06g003030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.4	938	979

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle+ +d p+++pC H ++++Cl   w    + +     CPlCr
   Q: 938  CPICLESASDDPVLTPCAHRMCRECLlSSW----R-TPDGGPCPLCR 979
           ********888**************99999....3.555556****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLASVAADDD SGWQESPSQA VLFADEIAAV RAVLGGGLSE ARVIAALSRC GGNAERAINA 60
LLDDAAEVGP APKRVKAELD VGGVPTPAPA DAKVKVKAES IDGGAVVLTA VKVKAESIDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGGCCT CCGTCGCTGC CGACGACGAC TCTGGGTGGC AGGAGTCCCC GTCGCAGGCC 60
GTCCTCTTCG CCGACGAGAT CGCCGCCGTC CGCGCCGTCC TGGGCGGGGG CCTTTCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR015940--UBA
IPR009060--UBA-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50030--UBA
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING
SM00165--UBA

Gene Ontology

GO:0009941--C:chloroplast envelope
GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_06g003030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	74.81	0.00e+00	1409.00
IUUC-Aml-001237	Ailuropoda melanoleuca	36.48	3.00e-95	342.00
IUUC-Atr-003058	Amborella trichopoda	59.93	0.00e+00	1062.00
IUUC-Apl-003679	Anas platyrhynchos	31.28	2.00e-71	263.00
IUUC-Aly-005600	Arabidopsis lyrata	59.93	0.00e+00	1092.00
IUUC-Ath-007079	Arabidopsis thaliana	59.67	0.00e+00	1080.00
IUUC-Bta-013391	Bos taurus	36.84	2.00e-104	373.00
IUUC-Bdi-014496	Brachypodium distachyon	67.31	0.00e+00	1518.00
IUUC-Bol-015995	Brassica oleracea	60.11	0.00e+00	1090.00
IUUC-Bra-017004	Brassica rapa	58.88	0.00e+00	1067.00
IUUC-Cja-019685	Callithrix jacchus	36.84	7.00e-106	377.00
IUUC-Csa-023894	Chlorocebus sabaeus	36.66	1.00e-105	377.00
IUUC-Cho-024891	Choloepus hoffmanni	34.86	6.00e-64	238.00
IUUC-Cgl-026606	Colletotrichum gloeosporioides	38.36	6.00e-137	481.00
IUUC-Dno-029517	Dasypus novemcinctus	35.93	2.00e-96	346.00
IUUC-Eca-034058	Equus caballus	35.95	3.00e-90	326.00
IUUC-Fca-035390	Felis catus	36.66	9.00e-96	344.00
IUUC-Fal-037486	Ficedula albicollis	29.75	6.00e-75	275.00
IUUC-Gmo-038544	Gadus morhua	40.51	2.00e-109	389.00
IUUC-Gga-040472	Gallus gallus	32.09	1.00e-73	271.00
IUUC-Gma-042857	Glycine max	55.04	0.00e+00	1003.00
IUUC-Hvu-047747	Hordeum vulgare	74.86	0.00e+00	1424.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	36.96	4.00e-104	372.00
IUUC-Lpe-051123	Leersia perrieri	69.76	0.00e+00	1610.00
IUUC-Laf-054309	Loxodonta africana	37.04	1.00e-96	347.00
IUUC-Mcc-055493	Macaca mulatta	36.48	2.00e-106	379.00
IUUC-Mtr-058194	Medicago truncatula	55.54	0.00e+00	987.00
IUUC-Mga-059553	Meleagris gallopavo	31.60	9.00e-74	271.00
IUUC-Mmr-061043	Microcebus murinus	36.84	5.00e-96	345.00
IUUC-Mmu-064338	Mus musculus	36.41	2.00e-102	366.00
IUUC-Mac-064548	Musa acuminata	58.06	0.00e+00	1075.00
IUUC-Mpu-066781	Mustela putorius furo	36.66	1.00e-95	343.00
IUUC-Opr-070388	Ochotona princeps	38.17	2.00e-47	183.00
IUUC-Oba-075316	Oryza barthii	67.80	0.00e+00	1561.00
IUUC-Obr-076834	Oryza brachyantha	68.20	0.00e+00	1584.00
IUUC-Ogl-077508	Oryza glaberrima	69.20	0.00e+00	1572.00
IUUC-Ogu-078083	Oryza glumaepatula	67.63	0.00e+00	1576.00
IUUC-Oin-079893	Oryza indica	69.37	0.00e+00	1593.00
IUUC-Olo-080615	Oryza longistaminata	69.66	0.00e+00	1600.00
IUUC-Oni-082773	Oryza nivara	67.80	0.00e+00	1574.00
IUUC-Opu-083675	Oryza punctata	70.46	0.00e+00	1627.00
IUUC-Oru-084543	Oryza rufipogon	67.80	0.00e+00	1573.00
IUUC-Ola-086830	Oryzias latipes	37.41	5.00e-100	358.00
IUUC-Oga-088120	Otolemur garnettii	36.84	3.00e-89	322.00
IUUC-Oar-089293	Ovis aries	36.84	2.00e-104	373.00
IUUC-Pop-099537	Populus trichocarpa	57.47	0.00e+00	1056.00
IUUC-Pca-100648	Procavia capensis	35.88	2.00e-101	362.00
IUUC-Ppe-102107	Prunus persica	58.11	0.00e+00	1103.00
IUUC-Pva-102896	Pteropus vampyrus	36.73	7.00e-86	311.00
IUUC-Sit-110795	Setaria italica	79.13	0.00e+00	1757.00
IUUC-Sly-111031	Solanum lycopersicum	51.83	0.00e+00	1116.00
IUUC-Stu-112600	Solanum tuberosum	61.12	0.00e+00	1108.00
IUUC-Ssc-116186	Sus scrofa	36.48	1.00e-103	370.00
IUUC-Tru-117768	Takifugu rubripes	39.13	3.00e-100	358.00
IUUC-Tca-121146	Theobroma cacao	59.36	0.00e+00	1071.00
IUUC-Tae-125036	Triticum aestivum	70.80	0.00e+00	1471.00
IUUC-Tur-125999	Triticum urartu	69.41	0.00e+00	1328.00
IUUC-Ttr-129132	Tursiops truncatus	34.39	3.00e-47	183.00
IUUC-Vpa-130672	Vicugna pacos	36.30	1.00e-96	347.00
IUUC-Vvi-131508	Vitis vinifera	62.06	0.00e+00	1132.00
IUUC-Yli-134588	Yarrowia lipolytica	33.70	1.00e-102	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence