iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107901

Ensembl Protein ID

EEB06661

UniProt Accession

B6JYP3; B6JYP3_SCHJY

Genbank Protein ID

EEB06661.1

Protein Name

Swi five-dependent recombination repair protein Sfr1

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_01708

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_01708	EEB06661	EEB06661

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	36.84	8.00e-01	31.60	IUUC-Ath-006911

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MSETNINDTT AKPQEEISSS TDILANVEEK SSIPVEPLEP VHVEDENNVP VPPKDTPVMN 60
TPEPKALHKL PDQQLFTPPI SRKRLRDVKS TLFKPFKSPV MKLPLTPQNQ NTQSPCAHET 120

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Nucleotide Sequence
(Fasta)

GCGGGGATAG TCTTTTTGAT GAAGGACGCG TCGAGTTACT TTTGTCCTTA GCCAATGTCA 60
GAAACGAATA TTAACGACAC AACTGCGAAG CCGCAGGAAG AAATTTCTTC ATCTACAGAT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR018468--Ds-recomb_repair_prot_Mei5

Pfam

PF10376--Mei5

Gene Ontology

GO:0005829--C:cytosol
GO:0035861--C:site of double-strand break
GO:0032798--C:Swi5-Sfr1 complex
GO:0003690--F:double-stranded DNA binding
GO:0003697--F:single-stranded DNA binding
GO:0031573--P:intra-S DNA damage checkpoint
GO:0010772--P:meiotic DNA recombinase assembly involved in reciprocal meiotic recombination
GO:0043388--P:positive regulation of DNA binding
GO:0010520--P:regulation of reciprocal meiotic recombination
GO:0042148--P:strand invasion

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005703	Arabidopsis lyrata	32.86	4.80e-02	31.60
IUUC-Ath-006911	Arabidopsis thaliana	36.84	4.70e-02	31.60
IUUC-Bta-012747	Bos taurus	26.67	7.60e-01	26.90
IUUC-Eeu-034792	Erinaceus europaeus	29.73	8.60e-01	26.90
IUUC-Mtr-058197	Medicago truncatula	25.93	5.70e-01	26.60
IUUC-Mmu-064212	Mus musculus	27.78	3.10e-01	28.50
IUUC-Mpu-066353	Mustela putorius furo	26.67	3.00e-01	27.70
IUUC-Ont-071708	Oreochromis niloticus	29.73	4.10e-01	27.30
IUUC-Osa-086280	Oryza sativa	36.84	4.70e-02	31.60
IUUC-Pfo-096969	Poecilia formosa	29.73	3.10e-01	27.70
IUUC-Sha-107367	Sarcophilus harrisii	29.73	1.20e+00	26.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence