iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095698

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544983

Gene Name

PHYPADRAFT_186507

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S94_153V6	PP1S94_153V6.1	PP1S94_153V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-27	93.7	308	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ v+++af  d + l+sGs D t+ +W+l
   Q: 308  HKEIVNGVAFsEDkKWLASGSKDSTVALWSL 338
           8999******866799*************96 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MALATSRRPA PDPVAVLRAH RAAVNVLAFH TPSGALLSGD ADGELKIWDL VKHRPVFSSR 60
VHTPSAGVLG IGVSSALNNK IISQGRDGTV KCWQLTESSL SRQPILSVKS ESYHFCKLAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATTCTCCG CGGCCATCCT TAGAGAGGTG ACGGTGTTAG AGTTGTGACG GAAAGATTTG 60
GCACACGAAA GTTGGGTGGC ACATCGTGGT AGACAGAATT GTATTCACAT AGTTTTTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031570--P:DNA integrity checkpoint
GO:0009663--P:plasmodesma organization
GO:0010497--P:plasmodesmata-mediated intercellular transport
GO:0071158--P:positive regulation of cell cycle arrest
GO:0006282--P:regulation of DNA repair
GO:2000280--P:regulation of root development
GO:0010044--P:response to aluminum ion
GO:0072718--P:response to cisplatin

KEGG

ppp:PHYPADRAFT_186507

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	35.98	2.00e-63	235.00
IUUC-Aml-001556	Ailuropoda melanoleuca	31.44	2.00e-38	151.00
IUUC-Atr-002691	Amborella trichopoda	41.15	4.00e-86	310.00
IUUC-Apl-003227	Anas platyrhynchos	34.99	1.00e-43	169.00
IUUC-Aly-006168	Arabidopsis lyrata	40.68	4.00e-79	287.00
IUUC-Ath-007145	Arabidopsis thaliana	40.16	2.00e-77	281.00
IUUC-Acl-008132	Aspergillus clavatus	22.57	1.00e-22	99.80
IUUC-Afl-008655	Aspergillus flavus	22.99	2.00e-23	102.00
IUUC-Afu-008778	Aspergillus fumigatus	25.85	6.00e-23	101.00
IUUC-Ani-009128	Aspergillus nidulans	25.82	3.00e-14	71.20
IUUC-Ang-009760	Aspergillus niger	27.30	3.00e-25	108.00
IUUC-Bgr-012119	Blumeria graminis	29.97	1.00e-28	120.00
IUUC-Bta-012556	Bos taurus	32.29	1.00e-39	156.00
IUUC-Bdi-014151	Brachypodium distachyon	40.68	4.00e-75	274.00
IUUC-Bol-016319	Brassica oleracea	40.16	1.00e-78	286.00
IUUC-Bra-016675	Brassica rapa	40.68	8.00e-79	286.00
IUUC-Cja-019523	Callithrix jacchus	30.72	9.00e-36	143.00
IUUC-Cfa-021217	Canis familiaris	32.84	6.00e-35	140.00
IUUC-Cpo-021506	Cavia porcellus	32.65	2.00e-36	145.00
IUUC-Csa-023674	Chlorocebus sabaeus	31.63	1.00e-36	145.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	25.24	3.00e-26	111.00
IUUC-Cne-026836	Cryptococcus neoformans	24.87	2.00e-19	89.70
IUUC-Cme-027295	Cyanidioschyzon merolae	24.43	1.00e-14	73.60
IUUC-Dre-027592	Danio rerio	32.85	5.00e-42	164.00
IUUC-Dno-029880	Dasypus novemcinctus	37.95	1.00e-31	129.00
IUUC-Dor-030266	Dipodomys ordii	35.64	1.00e-27	116.00
IUUC-Dse-031212	Dothistroma septosporum	29.93	7.00e-38	150.00
IUUC-Dme-032209	Drosophila melanogaster	26.15	1.00e-21	96.30
IUUC-Eca-033371	Equus caballus	31.41	8.00e-38	149.00
IUUC-Fca-035558	Felis catus	31.46	4.00e-38	150.00
IUUC-Fal-036794	Ficedula albicollis	34.69	8.00e-45	173.00
IUUC-Gmo-038742	Gadus morhua	31.47	1.00e-39	155.00
IUUC-Ggr-039849	Gaeumannomyces graminis	28.75	5.00e-13	68.20
IUUC-Gga-040868	Gallus gallus	35.67	3.00e-47	181.00
IUUC-Gac-041646	Gasterosteus aculeatus	33.33	3.00e-44	171.00
IUUC-Gma-044269	Glycine max	41.88	8.00e-82	296.00
IUUC-Ggo-044553	Gorilla gorilla	31.93	4.00e-37	147.00
IUUC-Hsa-046217	Homo sapiens	32.23	4.00e-37	147.00
IUUC-Hvu-047647	Hordeum vulgare	39.30	3.00e-74	271.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	33.73	2.00e-38	152.00
IUUC-Lch-050134	Latimeria chalumnae	33.33	3.00e-41	161.00
IUUC-Lpe-051524	Leersia perrieri	40.68	2.00e-68	252.00
IUUC-Loc-051757	Lepisosteus oculatus	28.10	6.00e-30	124.00
IUUC-Laf-053733	Loxodonta africana	34.98	2.00e-36	145.00
IUUC-Mcc-055477	Macaca mulatta	30.79	2.00e-29	121.00
IUUC-Meu-056758	Macropus eugenii	27.06	5.00e-20	90.90
IUUC-Mor-057289	Magnaporthe oryzae	29.12	1.00e-15	77.00
IUUC-Mpo-057309	Magnaporthe poae	27.38	9.00e-14	70.90
IUUC-Mtr-058616	Medicago truncatula	41.83	5.00e-76	277.00
IUUC-Mga-059637	Meleagris gallopavo	31.52	5.00e-23	100.00
IUUC-Mvi-060385	Microbotryum violaceum	24.56	8.00e-26	110.00
IUUC-Mmr-061675	Microcebus murinus	32.18	2.00e-37	149.00
IUUC-Mdo-062782	Monodelphis domestica	33.33	1.00e-38	152.00
IUUC-Mmu-064058	Mus musculus	34.90	7.00e-43	166.00
IUUC-Mac-065262	Musa acuminata	41.24	3.00e-84	304.00
IUUC-Mpu-066633	Mustela putorius furo	33.71	5.00e-30	124.00
IUUC-Mlu-067333	Myotis lucifugus	33.71	7.00e-35	140.00
IUUC-Nfi-068581	Neosartorya fischeri	24.17	3.00e-23	102.00
IUUC-Ncr-068680	Neurospora crassa	26.47	1.00e-15	77.00
IUUC-Nle-069485	Nomascus leucogenys	30.00	3.00e-33	135.00
IUUC-Oan-073361	Ornithorhynchus anatinus	30.53	4.00e-29	120.00
IUUC-Ocu-073923	Oryctolagus cuniculus	32.55	4.00e-31	128.00
IUUC-Oba-075743	Oryza barthii	35.75	5.00e-66	244.00
IUUC-Obr-076879	Oryza brachyantha	40.33	7.00e-72	263.00
IUUC-Ogl-077813	Oryza glaberrima	41.08	2.00e-75	275.00
IUUC-Ogu-078196	Oryza glumaepatula	35.75	5.00e-66	244.00
IUUC-Oin-080131	Oryza indica	41.08	1.00e-75	275.00
IUUC-Olo-080613	Oryza longistaminata	35.71	7.00e-37	146.00
IUUC-Ome-081912	Oryza meridionalis	39.46	5.00e-70	257.00
IUUC-Oni-082813	Oryza nivara	37.47	2.00e-67	248.00
IUUC-Opu-083663	Oryza punctata	42.33	4.00e-83	300.00
IUUC-Oru-085102	Oryza rufipogon	38.90	1.00e-69	256.00
IUUC-Osa-086204	Oryza sativa	41.08	1.00e-75	275.00
IUUC-Ola-086541	Oryzias latipes	32.04	1.00e-37	149.00
IUUC-Olu-087776	Ostreococcus lucimarinus	30.30	2.00e-13	68.20
IUUC-Oga-088039	Otolemur garnettii	31.34	2.00e-35	141.00
IUUC-Oar-089515	Ovis aries	41.12	1.00e-17	82.80
IUUC-Ptr-091291	Pan troglodytes	31.93	4.00e-37	147.00
IUUC-Pan-092644	Papio anubis	32.93	6.00e-38	150.00
IUUC-Psi-093646	Pelodiscus sinensis	34.01	1.00e-42	166.00
IUUC-Pfo-096601	Poecilia formosa	34.30	6.00e-45	173.00
IUUC-Pab-098407	Pongo abelii	31.93	8.00e-37	146.00
IUUC-Pop-099193	Populus trichocarpa	41.67	2.00e-82	298.00
IUUC-Pca-100366	Procavia capensis	31.64	4.00e-34	137.00
IUUC-Ppe-101608	Prunus persica	41.75	2.00e-84	305.00
IUUC-Pva-102775	Pteropus vampyrus	32.58	9.00e-33	133.00
IUUC-Pte-104132	Pyrenophora teres	27.01	9.00e-17	80.90
IUUC-Rno-105626	Rattus norvegicus	34.23	2.00e-41	162.00
IUUC-Sha-106539	Sarcophilus harrisii	33.62	6.00e-39	153.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	29.27	3.00e-28	118.00
IUUC-Spo-108326	Schizosaccharomyces pombe	24.00	6.00e-19	87.40
IUUC-Smo-109434	Selaginella moellendorffii	45.28	2.00e-85	308.00
IUUC-Sit-109771	Setaria italica	43.04	9.00e-85	306.00
IUUC-Sly-111138	Solanum lycopersicum	44.24	1.00e-85	309.00
IUUC-Stu-112425	Solanum tuberosum	44.89	9.00e-87	312.00
IUUC-Sbi-114356	Sorghum bicolor	40.37	3.00e-75	275.00
IUUC-Sre-115086	Sporisorium reilianum	24.10	1.00e-15	76.30
IUUC-Ssc-115256	Sus scrofa	30.29	3.00e-31	127.00
IUUC-Tgu-116774	Taeniopygia guttata	36.88	3.00e-38	151.00
IUUC-Tru-117900	Takifugu rubripes	30.00	1.00e-35	142.00
IUUC-Tsy-119540	Tarsius syrichta	47.22	2.00e-16	78.60
IUUC-Tni-120252	Tetraodon nigroviridis	32.66	1.00e-41	162.00
IUUC-Tca-121717	Theobroma cacao	41.56	1.00e-82	299.00
IUUC-Tre-122069	Trichoderma reesei	25.44	3.00e-23	102.00
IUUC-Tvi-122673	Trichoderma virens	26.72	3.00e-22	98.60
IUUC-Tae-124732	Triticum aestivum	39.68	4.00e-76	277.00
IUUC-Tme-127222	Tuber melanosporum	24.50	2.00e-22	99.00
IUUC-Ttr-129240	Tursiops truncatus	37.04	6.00e-30	124.00
IUUC-Uma-129437	Ustilago maydis	24.85	2.00e-15	75.90
IUUC-Vda-129913	Verticillium dahliae	30.59	3.00e-26	112.00
IUUC-Vvi-131718	Vitis vinifera	41.73	9.00e-83	299.00
IUUC-Xtr-132109	Xenopus tropicalis	34.68	5.00e-45	174.00
IUUC-Xma-133366	Xiphophorus maculatus	33.14	8.00e-43	166.00
IUUC-Zma-135563	Zea mays	35.70	1.00e-62	232.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence