iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132309

Ensembl Protein ID

ENSXETP00000032804.3

UniProt Accession

F7EJY7; F7EJY7_XENTR

Genbank Protein ID

ENSXETP00000032804

Protein Name

Nuclear transcription factor, X-box-binding 1

Genbank Nucleotide ID

AAMC01044026

Gene Name

nfx1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000014997.3	ENSXETT00000032804.3	ENSXETP00000032804.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	59.42	0.00e+00	1181.00	IUUC-Hsa-046870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

PFLLGQPKYN PDATDFIPRE RQSANPNWRS HIRSEINRNW NRQSNLPTSY QSHSSRETNH 60
DSPVQKLHPY TSSSKASERT QQGSPDTSSV KPVKNHSFQN QRWQRSRSER SHTRNHPRQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTTTTTGT TAGGTCAACC AAAATATAAC CCTGATGCAA CTGACTTTAT CCCCAGAGAG 60
AGACAAAGTG CCAACCCAAA TTGGAGAAGT CATATAAGAT CAGAAATTAA CAGAAACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR034078--NFX1_fam
IPR001374--R3H_dom
IPR034076--R3H_NF-X1
IPR019786--Zinc_finger_PHD-type_CS
IPR000967--Znf_NFX1
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING

PROSITE

PS51061--R3H
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF01424--R3H
PF01422--zf-NF-X1

SMART

SM00393--R3H
SM00438--ZnF_NFX

Gene Ontology

GO:0005634--C:nucleus
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001078--F:transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008270--F:zinc ion binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006366--P:transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000224	Aegilops tauschii	36.06	2.00e-73	270.00
IUUC-Aml-001716	Ailuropoda melanoleuca	59.28	0.00e+00	1202.00
IUUC-Atr-002895	Amborella trichopoda	35.70	5.00e-139	488.00
IUUC-Apl-003650	Anas platyrhynchos	62.10	0.00e+00	1328.00
IUUC-Aca-004313	Anolis carolinensis	60.21	0.00e+00	1318.00
IUUC-Aly-006515	Arabidopsis lyrata	37.17	4.00e-132	466.00
IUUC-Ath-007056	Arabidopsis thaliana	37.20	1.00e-131	464.00
IUUC-Ago-007777	Ashbya gossypii	30.89	1.00e-83	304.00
IUUC-Acl-008068	Aspergillus clavatus	34.76	5.00e-78	286.00
IUUC-Afl-008499	Aspergillus flavus	34.08	2.00e-45	176.00
IUUC-Afu-009016	Aspergillus fumigatus	34.57	1.00e-114	407.00
IUUC-Ani-009477	Aspergillus nidulans	34.98	2.00e-117	417.00
IUUC-Ang-009605	Aspergillus niger	35.68	7.00e-122	431.00
IUUC-Aor-010166	Aspergillus oryzae	31.51	1.00e-51	197.00
IUUC-Ame-010640	Astyanax mexicanus	65.34	0.00e+00	1064.00
IUUC-Bgr-012024	Blumeria graminis	33.46	2.00e-102	367.00
IUUC-Bta-012789	Bos taurus	59.30	0.00e+00	1218.00
IUUC-Bci-013768	Botrytis cinerea	34.83	8.00e-119	421.00
IUUC-Bdi-014723	Brachypodium distachyon	36.58	8.00e-115	408.00
IUUC-Bol-015394	Brassica oleracea	38.60	8.00e-137	481.00
IUUC-Bra-017266	Brassica rapa	38.08	2.00e-135	477.00
IUUC-Cel-018668	Caenorhabditis elegans	39.45	2.00e-155	543.00
IUUC-Cja-019769	Callithrix jacchus	57.49	0.00e+00	1135.00
IUUC-Cfa-020727	Canis familiaris	59.47	0.00e+00	1209.00
IUUC-Cpo-021741	Cavia porcellus	58.20	0.00e+00	1206.00
IUUC-Csa-024054	Chlorocebus sabaeus	59.14	0.00e+00	1183.00
IUUC-Cho-025031	Choloepus hoffmanni	66.49	0.00e+00	984.00
IUUC-Cin-025164	Ciona intestinalis	50.40	0.00e+00	685.00
IUUC-Csv-026260	Ciona savignyi	48.08	0.00e+00	706.00
IUUC-Cgl-026451	Colletotrichum gloeosporioides	34.59	4.00e-80	293.00
IUUC-Cne-026923	Cryptococcus neoformans	33.19	8.00e-77	282.00
IUUC-Dre-028227	Danio rerio	53.56	0.00e+00	1122.00
IUUC-Dno-029830	Dasypus novemcinctus	57.47	0.00e+00	1176.00
IUUC-Dor-030436	Dipodomys ordii	63.75	0.00e+00	857.00
IUUC-Dse-031485	Dothistroma septosporum	34.40	3.00e-107	383.00
IUUC-Dme-031875	Drosophila melanogaster	40.89	5.00e-163	568.00
IUUC-Eca-033415	Equus caballus	49.85	1.00e-145	509.00
IUUC-Eeu-034528	Erinaceus europaeus	67.85	0.00e+00	774.00
IUUC-Fca-036238	Felis catus	73.66	0.00e+00	1085.00
IUUC-Fal-037124	Ficedula albicollis	62.70	0.00e+00	1362.00
IUUC-Fox-038075	Fusarium oxysporum	34.67	1.00e-05	45.40
IUUC-Fso-038310	Fusarium solani	33.46	8.00e-99	355.00
IUUC-Gmo-039506	Gadus morhua	66.35	0.00e+00	1014.00
IUUC-Ggr-039984	Gaeumannomyces graminis	36.18	1.00e-122	434.00
IUUC-Gga-040674	Gallus gallus	75.88	0.00e+00	1179.00
IUUC-Gac-041416	Gasterosteus aculeatus	66.35	0.00e+00	1012.00
IUUC-Gma-043625	Glycine max	37.44	2.00e-126	447.00
IUUC-Ggo-045017	Gorilla gorilla	59.30	0.00e+00	1198.00
IUUC-Hsa-046870	Homo sapiens	59.42	0.00e+00	1198.00
IUUC-Hvu-047466	Hordeum vulgare	35.66	1.00e-68	254.00
IUUC-Itr-048703	Ictidomys tridecemlineatus	39.06	4.00e-56	211.00
IUUC-Kpa-049244	Komagataella pastoris	30.81	6.00e-71	262.00
IUUC-Lch-050376	Latimeria chalumnae	61.27	0.00e+00	1274.00
IUUC-Lpe-050955	Leersia perrieri	35.49	6.00e-94	338.00
IUUC-Loc-051948	Lepisosteus oculatus	57.40	0.00e+00	1232.00
IUUC-Lma-052950	Leptosphaeria maculans	34.49	2.00e-105	377.00
IUUC-Laf-054206	Loxodonta africana	52.17	0.00e+00	655.00
IUUC-Mcc-055005	Macaca mulatta	59.23	0.00e+00	1188.00
IUUC-Meu-056120	Macropus eugenii	68.12	2.00e-171	596.00
IUUC-Mor-057238	Magnaporthe oryzae	34.53	6.00e-114	405.00
IUUC-Mpo-057574	Magnaporthe poae	35.14	1.00e-120	427.00
IUUC-Mtr-057823	Medicago truncatula	39.79	2.00e-123	436.00
IUUC-Mla-058822	Melampsora laricipopulina	32.51	4.00e-98	352.00
IUUC-Mga-059785	Meleagris gallopavo	55.60	0.00e+00	723.00
IUUC-Mvi-060543	Microbotryum violaceum	31.32	3.00e-94	340.00
IUUC-Mmr-060611	Microcebus murinus	58.35	0.00e+00	1160.00
IUUC-Mdo-062719	Monodelphis domestica	61.86	0.00e+00	1331.00
IUUC-Mmu-064376	Mus musculus	57.63	0.00e+00	1148.00
IUUC-Mac-064834	Musa acuminata	33.94	6.00e-105	375.00
IUUC-Mpu-066298	Mustela putorius furo	59.07	0.00e+00	1195.00
IUUC-Mlu-067546	Myotis lucifugus	57.58	0.00e+00	1201.00
IUUC-Nfi-068388	Neosartorya fischeri	35.71	3.00e-121	429.00
IUUC-Ncr-068875	Neurospora crassa	34.01	2.00e-109	390.00
IUUC-Nle-069813	Nomascus leucogenys	58.82	0.00e+00	1190.00
IUUC-Opr-070995	Ochotona princeps	64.18	0.00e+00	1050.00
IUUC-Ont-072084	Oreochromis niloticus	69.74	0.00e+00	1114.00
IUUC-Oan-073545	Ornithorhynchus anatinus	51.88	0.00e+00	1079.00
IUUC-Ocu-074092	Oryctolagus cuniculus	54.93	0.00e+00	1166.00
IUUC-Oba-075828	Oryza barthii	36.63	2.00e-101	363.00
IUUC-Obr-076373	Oryza brachyantha	35.70	9.00e-71	261.00
IUUC-Ogl-077043	Oryza glaberrima	38.16	1.00e-111	397.00
IUUC-Ogu-078647	Oryza glumaepatula	37.75	3.00e-109	389.00
IUUC-Oin-079793	Oryza indica	36.64	5.00e-76	278.00
IUUC-Olo-080815	Oryza longistaminata	36.75	1.00e-102	368.00
IUUC-Ome-081650	Oryza meridionalis	37.80	5.00e-113	402.00
IUUC-Oni-082708	Oryza nivara	37.66	9.00e-113	401.00
IUUC-Opu-084078	Oryza punctata	38.02	8.00e-110	391.00
IUUC-Oru-084549	Oryza rufipogon	37.53	3.00e-112	400.00
IUUC-Osa-086095	Oryza sativa	36.89	1.00e-93	337.00
IUUC-Olu-087617	Ostreococcus lucimarinus	26.19	8.00e-09	55.50
IUUC-Oga-088453	Otolemur garnettii	57.42	0.00e+00	1150.00
IUUC-Oar-089769	Ovis aries	59.00	0.00e+00	1222.00
IUUC-Ptr-090803	Pan troglodytes	59.42	0.00e+00	1198.00
IUUC-Pan-092169	Papio anubis	59.54	0.00e+00	1201.00
IUUC-Psi-094065	Pelodiscus sinensis	63.35	0.00e+00	1437.00
IUUC-Pma-094592	Petromyzon marinus	56.18	0.00e+00	895.00
IUUC-Pno-095016	Phaeosphaeria nodorum	34.11	2.00e-14	73.20
IUUC-Ppa-095597	Physcomitrella patens	35.79	6.00e-125	442.00
IUUC-Pfo-096959	Poecilia formosa	67.65	0.00e+00	1135.00
IUUC-Pab-097732	Pongo abelii	71.88	0.00e+00	952.00
IUUC-Pop-099062	Populus trichocarpa	37.97	3.00e-130	459.00
IUUC-Pca-100219	Procavia capensis	47.57	0.00e+00	853.00
IUUC-Ppe-101695	Prunus persica	37.63	1.00e-131	464.00
IUUC-Pva-102402	Pteropus vampyrus	67.91	0.00e+00	942.00
IUUC-Pgr-103317	Puccinia graminis	30.01	1.00e-94	342.00
IUUC-Ptt-103771	Puccinia triticina	30.90	1.00e-88	321.00
IUUC-Pte-104189	Pyrenophora teres	33.80	4.00e-12	66.60
IUUC-Pyt-104801	Pyrenophora triticirepentis	34.91	3.00e-106	379.00
IUUC-Rno-105721	Rattus norvegicus	58.93	0.00e+00	1187.00
IUUC-Sce-106350	Saccharomyces cerevisiae	30.20	5.00e-89	322.00
IUUC-Sha-106801	Sarcophilus harrisii	60.91	0.00e+00	1328.00
IUUC-Sja-107692	Schizosaccharomyces japonicus	34.87	3.00e-125	442.00
IUUC-Spo-108253	Schizosaccharomyces pombe	37.65	3.00e-124	439.00
IUUC-Ssl-108587	Sclerotinia sclerotiorum	35.73	4.00e-73	269.00
IUUC-Smo-108865	Selaginella moellendorffii	37.80	4.00e-117	415.00
IUUC-Sit-110153	Setaria italica	37.30	6.00e-114	405.00
IUUC-Sly-111638	Solanum lycopersicum	35.92	3.00e-127	449.00
IUUC-Stu-112099	Solanum tuberosum	36.35	4.00e-129	455.00
IUUC-Sar-113030	Sorex araneus	62.27	2.00e-130	459.00
IUUC-Sbi-113944	Sorghum bicolor	36.83	1.00e-115	410.00
IUUC-Sre-115206	Sporisorium reilianum	33.21	7.00e-112	398.00
IUUC-Ssc-115729	Sus scrofa	38.94	2.00e-59	223.00
IUUC-Tgu-117520	Taeniopygia guttata	67.29	0.00e+00	1053.00
IUUC-Tru-118487	Takifugu rubripes	67.29	0.00e+00	1092.00
IUUC-Tsy-119363	Tarsius syrichta	53.29	0.00e+00	982.00
IUUC-Tca-121813	Theobroma cacao	38.09	2.00e-128	453.00
IUUC-Tre-122248	Trichoderma reesei	35.48	3.00e-104	373.00
IUUC-Tvi-122462	Trichoderma virens	35.21	8.00e-111	395.00
IUUC-Tae-123637	Triticum aestivum	36.84	1.00e-107	384.00
IUUC-Tur-126173	Triticum urartu	36.61	3.00e-98	353.00
IUUC-Tme-127213	Tuber melanosporum	34.66	3.00e-108	387.00
IUUC-Tbe-127399	Tupaia belangeri	69.44	0.00e+00	640.00
IUUC-Ttr-128798	Tursiops truncatus	71.96	0.00e+00	707.00
IUUC-Uma-129421	Ustilago maydis	33.59	2.00e-111	397.00
IUUC-Vda-129863	Verticillium dahliae	32.48	4.00e-103	369.00
IUUC-Vvi-131615	Vitis vinifera	36.80	5.00e-139	488.00
IUUC-Xma-133235	Xiphophorus maculatus	57.90	0.00e+00	1095.00
IUUC-Yli-134536	Yarrowia lipolytica	33.29	1.00e-99	357.00
IUUC-Zma-135358	Zea mays	36.92	7.00e-109	388.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence