iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116310

Ensembl Protein ID

ENSSSCP00000009961.1

UniProt Accession

F1RST2; F1RST2_PIG

Genbank Protein ID

ENSSSCP00000009961

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU582939

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000009333.1	ENSSSCT00000010227.1	ENSSSCP00000009961.1
ENSSSCG00000009333.1	ENSSSCT00000010228.1	ENSSSCP00000009962.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-38	129.5	177	213
UBD/Beta-Prp	5.70e-56	190.1	130	473

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           +++tc+ f s+ ++lv+G++Dg++k+W++  g++l++
   Q: 177  AGITCMTFdSSgRRLVTGGRDGSLKIWSYNNGHCLHT 213
           469*****95569*********************986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl..sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..g 92
           +h +++ c  +sp  +++++ s+ + +kvwd +tg ll+++     +a++t+++f+++g  lvtg++D+ +k+w++++g c+htlk  +
   Q: 130  SHREPVVCCRYSPTFRQVVSCSEASVVKVWDCETGRLLSEFigAHGNAGITCMTFDSSGRRLVTGGRDGSLKIWSYNNGHCLHTLKhdE 218
           5677777899*******************************76677899*************************************777 PP
   S: 93   hedsvlslsfsp..sgdklvsGshdrtirv...........wdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.. 166
           ++++++++++ +  +++ +++ ++dr i+v           w+ +  +    ++ gh++ + cv+  p  +ll+++s+D+ + +W++  
   Q: 219  KQSEICDCTYLEvnQNKLIIAVGWDRRINVyfdtpcdfrhfWKPQPHWQDD-LDHGHKEDILCVAQCP-PFLLATSSYDGEIIIWNVis 305
           8899********9455888899********888887777766555555544.*******999987666.7*****************88 PP
   S: 167  .............................................................ktgkllrtl..tgghtdsvyslsfdsng 192
                                                                         + + +  +  ++ +  +v s+ ++   
   Q: 306  ghvccklntpstsdgaedgegpdrsvscltflktraanlesaaaslitngpqgsitfwrlfGRTCPIANFtpSK-DRAQVSSMVVTAGD 393
           88888888888888888888888777777777777777777777777777666666666665555555566444.77777777777777 PP
   S: 193  kelvsgsldgtvklwdlq..........tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
            +   +++dg v+++d++            +  + +++h ++v+s+++ +++++l+s s D ++r+W ++ g++++t+ ++
   Q: 394  ARAYVADQDGFVRVYDIEeyglwgpelqPPKNAMFWRAHVSTVTSLELIEEEKLLLSSSLDHTVRLW-STDGEYIGTFGQS 473
           9999999999999999998777777766445589999999999999999999999999999999999.6888998888874 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

LKISVKIIVG KRKNVLLTGG MDRVIRVWNP YLPGKPTGIL KSHTAPVIYI HVSAEDNRMF 60
SMSTDNTIKI WDLETDSCLF TTSSKASGIR GEPRACLYLP DPRALCVAAD AIALLHLRQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAAAATAT CTGTCAAAAT AATTGTAGGA TAGGAATTCC CCGGTGGCTC AGCAGATTAA 60
GGATCTAGTG TTGTCTCTGC TGTTTCCAGG TTCCATCCCT GGCATGGAAT TTCCACATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001921	Ailuropoda melanoleuca	81.10	0.00e+00	840.00
IUUC-Ame-011582	Astyanax mexicanus	49.70	5.00e-135	474.00
IUUC-Bta-013034	Bos taurus	79.96	0.00e+00	811.00
IUUC-Cin-025633	Ciona intestinalis	45.31	4.00e-92	331.00
IUUC-Csv-026326	Ciona savignyi	43.11	3.00e-125	441.00
IUUC-Dre-027573	Danio rerio	46.91	2.00e-147	516.00
IUUC-Dno-030073	Dasypus novemcinctus	70.99	0.00e+00	726.00
IUUC-Eca-033354	Equus caballus	76.54	0.00e+00	768.00
IUUC-Fca-036185	Felis catus	74.57	0.00e+00	763.00
IUUC-Gmo-039551	Gadus morhua	42.80	1.00e-104	372.00
IUUC-Gac-041482	Gasterosteus aculeatus	46.14	1.00e-136	479.00
IUUC-Itr-049019	Ictidomys tridecemlineatus	76.29	0.00e+00	801.00
IUUC-Lch-050242	Latimeria chalumnae	59.13	2.00e-174	605.00
IUUC-Loc-052710	Lepisosteus oculatus	56.54	5.00e-168	584.00
IUUC-Mdo-062347	Monodelphis domestica	63.79	0.00e+00	698.00
IUUC-Mmu-063878	Mus musculus	70.11	0.00e+00	759.00
IUUC-Mpu-065721	Mustela putorius furo	82.30	1.00e-104	372.00
IUUC-Ont-071688	Oreochromis niloticus	47.50	1.00e-133	469.00
IUUC-Oan-072752	Ornithorhynchus anatinus	62.63	3.00e-164	571.00
IUUC-Ocu-074780	Oryctolagus cuniculus	64.41	4.00e-98	350.00
IUUC-Ola-086449	Oryzias latipes	47.31	9.00e-123	433.00
IUUC-Pma-094599	Petromyzon marinus	51.93	7.00e-151	526.00
IUUC-Ppa-095538	Physcomitrella patens	34.48	7.00e-19	89.00
IUUC-Pfo-096408	Poecilia formosa	45.98	8.00e-135	473.00
IUUC-Rno-105331	Rattus norvegicus	66.09	0.00e+00	701.00
IUUC-Sha-106832	Sarcophilus harrisii	66.03	0.00e+00	715.00
IUUC-Smo-109247	Selaginella moellendorffii	29.69	1.00e-48	188.00
IUUC-Tru-117666	Takifugu rubripes	45.93	1.00e-124	439.00
IUUC-Tni-120449	Tetraodon nigroviridis	24.74	5.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence