iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016877

Ensembl Protein ID

Bra035455.1-P

UniProt Accession

M4F305; M4F305_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035455	Bra035455.1	Bra035455.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-12	45.7	2389	2419

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H+d v+c+a   d  +l++Gs+D t++vWD+
   Q: 2389 HKDVVSCVAVtADsSILATGSYDTTVMVWDI 2419
           9********995559***************5 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MESPATASHS VRISISPMLV VVDCLRIDKN PSVSVLLDAL EQSVSTPSIA NGLSQRLLRS 60
LQLSNENKLS FKALNGPCRV LRLACTQARE SRKSLCVDPL LESSDDSGVL VDSPHNKSHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAATCGC CTGCAACTGC GTCTCATTCG GTACGCATTT CAATTTCTCC GATGCTTGTC 60
GTTGTTGATT GCTTGAGAAT CGATAAGAAT GTGGGTTTAG TTGGAGTATT GTTTGAAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000860	Aegilops tauschii	56.61	0.00e+00	1937.00
IUUC-Atr-002998	Amborella trichopoda	59.75	0.00e+00	3099.00
IUUC-Apl-004130	Anas platyrhynchos	37.99	2.00e-141	498.00
IUUC-Aca-005124	Anolis carolinensis	34.72	7.00e-150	526.00
IUUC-Aly-005407	Arabidopsis lyrata	92.89	0.00e+00	2453.00
IUUC-Ath-007674	Arabidopsis thaliana	91.45	0.00e+00	4816.00
IUUC-Bta-012509	Bos taurus	34.54	2.00e-143	504.00
IUUC-Bdi-014244	Brachypodium distachyon	53.80	0.00e+00	2044.00
IUUC-Bol-015261	Brassica oleracea	97.06	0.00e+00	5078.00
IUUC-Cja-018744	Callithrix jacchus	39.17	2.00e-144	505.00
IUUC-Cfa-020786	Canis familiaris	38.49	9.00e-146	512.00
IUUC-Cpo-021636	Cavia porcellus	38.26	7.00e-139	489.00
IUUC-Dme-031593	Drosophila melanogaster	38.95	3.00e-134	473.00
IUUC-Ete-032532	Echinops telfairi	37.74	2.00e-116	415.00
IUUC-Eca-033893	Equus caballus	34.24	7.00e-145	509.00
IUUC-Fal-036871	Ficedula albicollis	38.69	2.00e-146	514.00
IUUC-Gmo-039388	Gadus morhua	37.60	4.00e-135	477.00
IUUC-Gga-041206	Gallus gallus	34.60	3.00e-145	510.00
IUUC-Gma-042772	Glycine max	65.55	0.00e+00	3424.00
IUUC-Ggo-045255	Gorilla gorilla	36.79	1.00e-126	447.00
IUUC-Hvu-047772	Hordeum vulgare	58.03	0.00e+00	1772.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	38.44	3.00e-143	504.00
IUUC-Lpe-050958	Leersia perrieri	54.24	0.00e+00	2107.00
IUUC-Loc-052771	Lepisosteus oculatus	39.25	7.00e-146	513.00
IUUC-Laf-053724	Loxodonta africana	38.36	4.00e-145	510.00
IUUC-Mcc-055200	Macaca mulatta	39.25	2.00e-144	505.00
IUUC-Mtr-058372	Medicago truncatula	65.14	0.00e+00	3316.00
IUUC-Mga-059851	Meleagris gallopavo	38.05	3.00e-144	505.00
IUUC-Mmr-061112	Microcebus murinus	38.71	2.00e-145	511.00
IUUC-Mdo-062727	Monodelphis domestica	35.26	2.00e-147	517.00
IUUC-Mmu-064194	Mus musculus	38.79	2.00e-144	506.00
IUUC-Mac-064991	Musa acuminata	58.41	0.00e+00	2962.00
IUUC-Mpu-066074	Mustela putorius furo	34.75	2.00e-145	511.00
IUUC-Mlu-067308	Myotis lucifugus	38.08	5.00e-141	496.00
IUUC-Ont-071396	Oreochromis niloticus	36.97	2.00e-140	494.00
IUUC-Oan-073413	Ornithorhynchus anatinus	39.07	1.00e-144	506.00
IUUC-Ocu-074483	Oryctolagus cuniculus	37.44	5.00e-139	488.00
IUUC-Oba-075426	Oryza barthii	54.39	0.00e+00	2118.00
IUUC-Obr-076854	Oryza brachyantha	57.18	0.00e+00	2784.00
IUUC-Ogl-077620	Oryza glaberrima	63.36	0.00e+00	1338.00
IUUC-Ogu-078751	Oryza glumaepatula	55.51	0.00e+00	1746.00
IUUC-Oin-079746	Oryza indica	51.04	0.00e+00	2484.00
IUUC-Olo-081072	Oryza longistaminata	56.61	0.00e+00	1657.00
IUUC-Ome-081391	Oryza meridionalis	55.01	0.00e+00	2670.00
IUUC-Oni-082349	Oryza nivara	55.28	0.00e+00	2180.00
IUUC-Opu-083178	Oryza punctata	54.86	0.00e+00	2580.00
IUUC-Oru-085197	Oryza rufipogon	57.62	0.00e+00	1843.00
IUUC-Osa-085645	Oryza sativa	64.62	6.00e-99	353.00
IUUC-Ola-087242	Oryzias latipes	38.62	3.00e-144	506.00
IUUC-Olu-087890	Ostreococcus lucimarinus	37.24	8.00e-138	484.00
IUUC-Oga-088409	Otolemur garnettii	39.38	2.00e-146	513.00
IUUC-Oar-089217	Ovis aries	34.82	3.00e-144	507.00
IUUC-Ppa-095295	Physcomitrella patens	45.24	0.00e+00	2183.00
IUUC-Pop-099604	Populus trichocarpa	68.29	0.00e+00	3458.00
IUUC-Ppe-101836	Prunus persica	69.34	0.00e+00	2684.00
IUUC-Rno-104971	Rattus norvegicus	38.71	2.00e-142	499.00
IUUC-Sha-107387	Sarcophilus harrisii	34.18	2.00e-146	514.00
IUUC-Smo-108699	Selaginella moellendorffii	53.70	0.00e+00	882.00
IUUC-Sit-110075	Setaria italica	60.37	0.00e+00	2107.00
IUUC-Sly-111033	Solanum lycopersicum	67.20	0.00e+00	2167.00
IUUC-Sbi-114049	Sorghum bicolor	50.76	0.00e+00	1934.00
IUUC-Tgu-117304	Taeniopygia guttata	34.03	8.00e-146	512.00
IUUC-Tni-120239	Tetraodon nigroviridis	37.76	3.00e-139	490.00
IUUC-Tca-121572	Theobroma cacao	69.52	0.00e+00	3607.00
IUUC-Tae-124172	Triticum aestivum	49.32	0.00e+00	1727.00
IUUC-Tur-126212	Triticum urartu	57.50	0.00e+00	1733.00
IUUC-Ttr-128452	Tursiops truncatus	38.90	1.00e-143	505.00
IUUC-Vvi-130860	Vitis vinifera	68.68	0.00e+00	3489.00
IUUC-Xtr-132038	Xenopus tropicalis	37.15	4.00e-132	467.00
IUUC-Xma-133712	Xiphophorus maculatus	38.61	1.00e-141	498.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence