iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mcc-054998

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

JSUE03036044

Gene Name

ERCC8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMMUG00000021812.3	ENSMMUT00000030694.3	ENSMMUP00000028727.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-28	97.7	184	218

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH  ++ ++++   +d +l+++s D  +k+WD+r+
   Q: 184  GHRQEILAVSWsprHDYILATASADSRVKLWDVRR 218
           8***********8666889*************986 PP

Organism

Macaca mulatta

Protein Sequence
(Fasta)

MLGFLSARQT GLEDPLRLRR AESTRRVLGL ELNKDRDVER IHGGGINTLD IEPVEGRYML 60
SGGSDGVIVL YDLENSSRQS YYTCKAVCSI GRDHPDVHRY SVETVQWYPH DTGMFTSSSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGGGGT TTTTGTCCGC GCGACAAACG GGTTTGGAGG ACCCTCTTCG CCTTCGGAGA 60
GCAGAGTCAA CACGGAGGTA AAGAAAACCT TACTTTTTGG CTAACAGGCC AGTTAGAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031464--C:Cul4A-RING E3 ubiquitin ligase complex
GO:0016363--C:nuclear matrix
GO:0000109--C:nucleotide-excision repair complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006979--P:response to oxidative stress
GO:0009411--P:response to UV
GO:0010165--P:response to X-ray
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001170	Aegilops tauschii	38.17	4.00e-25	110.00
IUUC-Aml-002201	Ailuropoda melanoleuca	93.95	2.00e-160	558.00
IUUC-Atr-002784	Amborella trichopoda	37.18	5.00e-41	162.00
IUUC-Apl-003202	Anas platyrhynchos	85.28	2.00e-137	482.00
IUUC-Aca-004708	Anolis carolinensis	82.62	2.00e-145	508.00
IUUC-Aly-006144	Arabidopsis lyrata	38.65	1.00e-43	170.00
IUUC-Ath-006673	Arabidopsis thaliana	39.71	4.00e-45	175.00
IUUC-Acl-008195	Aspergillus clavatus	38.46	1.00e-40	160.00
IUUC-Afl-008406	Aspergillus flavus	36.63	1.00e-36	147.00
IUUC-Afu-008759	Aspergillus fumigatus	36.15	8.00e-38	151.00
IUUC-Ani-009380	Aspergillus nidulans	37.31	1.00e-38	154.00
IUUC-Ang-009820	Aspergillus niger	35.47	9.00e-37	147.00
IUUC-Aor-010092	Aspergillus oryzae	35.59	2.00e-41	163.00
IUUC-Ate-010491	Aspergillus terreus	36.16	5.00e-42	165.00
IUUC-Bta-012825	Bos taurus	94.66	3.00e-161	561.00
IUUC-Bci-013856	Botrytis cinerea	36.95	3.00e-46	179.00
IUUC-Bdi-014899	Brachypodium distachyon	31.94	7.00e-46	178.00
IUUC-Bol-015337	Brassica oleracea	37.93	7.00e-45	174.00
IUUC-Bra-018089	Brassica rapa	37.93	1.00e-44	174.00
IUUC-Cja-018725	Callithrix jacchus	96.44	9.00e-163	566.00
IUUC-Cfa-021162	Canis familiaris	94.66	4.00e-161	560.00
IUUC-Cpo-022190	Cavia porcellus	93.95	3.00e-160	557.00
IUUC-Cre-022960	Chlamydomonas reinhardtii	37.14	4.00e-40	159.00
IUUC-Csa-023610	Chlorocebus sabaeus	99.29	1.00e-167	582.00
IUUC-Cho-024689	Choloepus hoffmanni	93.33	1.00e-142	499.00
IUUC-Cin-025324	Ciona intestinalis	40.57	3.00e-62	232.00
IUUC-Csv-026059	Ciona savignyi	40.29	3.00e-52	199.00
IUUC-Cgl-026384	Colletotrichum gloeosporioides	36.82	4.00e-36	145.00
IUUC-Cme-027182	Cyanidioschyzon merolae	28.66	9.00e-14	72.40
IUUC-Dre-028696	Danio rerio	75.18	2.00e-127	449.00
IUUC-Dno-029102	Dasypus novemcinctus	94.31	1.00e-161	562.00
IUUC-Dor-030361	Dipodomys ordii	70.46	6.00e-110	390.00
IUUC-Dse-031167	Dothistroma septosporum	32.58	2.00e-37	149.00
IUUC-Ete-032856	Echinops telfairi	68.62	2.00e-112	398.00
IUUC-Eca-033611	Equus caballus	95.52	6.00e-128	450.00
IUUC-Eeu-034583	Erinaceus europaeus	76.57	7.00e-104	370.00
IUUC-Fca-036481	Felis catus	95.02	2.00e-162	565.00
IUUC-Fal-037327	Ficedula albicollis	83.04	3.00e-113	401.00
IUUC-Fox-037684	Fusarium oxysporum	35.74	9.00e-41	160.00
IUUC-Fso-038306	Fusarium solani	36.52	3.00e-49	189.00
IUUC-Gmo-039043	Gadus morhua	71.63	1.00e-120	426.00
IUUC-Ggr-039783	Gaeumannomyces graminis	33.33	4.00e-35	142.00
IUUC-Gga-041085	Gallus gallus	86.52	7.00e-149	520.00
IUUC-Gac-042328	Gasterosteus aculeatus	73.76	2.00e-119	422.00
IUUC-Gma-042916	Glycine max	31.25	2.00e-40	160.00
IUUC-Ggo-045627	Gorilla gorilla	87.06	2.00e-143	501.00
IUUC-Hsa-046028	Homo sapiens	99.29	1.00e-167	582.00
IUUC-Hvu-047678	Hordeum vulgare	41.76	9.00e-19	87.40
IUUC-Itr-048648	Ictidomys tridecemlineatus	93.59	2.00e-160	558.00
IUUC-Kpa-049386	Komagataella pastoris	32.38	1.00e-39	157.00
IUUC-Lch-050590	Latimeria chalumnae	79.79	2.00e-129	454.00
IUUC-Lpe-051725	Leersia perrieri	33.61	9.00e-24	104.00
IUUC-Loc-051788	Lepisosteus oculatus	78.31	2.00e-129	455.00
IUUC-Lma-053082	Leptosphaeria maculans	38.40	3.00e-47	182.00
IUUC-Laf-053809	Loxodonta africana	94.31	2.00e-161	561.00
IUUC-Meu-055929	Macropus eugenii	75.18	5.00e-123	434.00
IUUC-Mor-057003	Magnaporthe oryzae	35.34	1.00e-44	174.00
IUUC-Mtr-057921	Medicago truncatula	30.68	6.00e-41	161.00
IUUC-Mga-059449	Meleagris gallopavo	81.99	3.00e-81	295.00
IUUC-Mmr-061609	Microcebus murinus	89.86	2.00e-145	508.00
IUUC-Mdo-062564	Monodelphis domestica	85.82	4.00e-149	521.00
IUUC-Mmu-063904	Mus musculus	93.24	1.00e-160	558.00
IUUC-Mac-064716	Musa acuminata	36.16	1.00e-40	160.00
IUUC-Mpu-066617	Mustela putorius furo	94.31	7.00e-161	559.00
IUUC-Mlu-067054	Myotis lucifugus	91.46	2.00e-156	545.00
IUUC-Nfi-068467	Neosartorya fischeri	37.04	6.00e-33	134.00
IUUC-Nle-069731	Nomascus leucogenys	99.29	1.00e-167	582.00
IUUC-Opr-070297	Ochotona princeps	68.62	1.00e-87	316.00
IUUC-Ont-072558	Oreochromis niloticus	75.18	5.00e-120	424.00
IUUC-Oan-072864	Ornithorhynchus anatinus	87.50	1.00e-26	110.00
IUUC-Ocu-074415	Oryctolagus cuniculus	95.37	8.00e-163	566.00
IUUC-Oba-075759	Oryza barthii	38.27	6.00e-43	168.00
IUUC-Obr-076387	Oryza brachyantha	37.91	8.00e-45	174.00
IUUC-Ogu-078186	Oryza glumaepatula	32.14	1.00e-44	174.00
IUUC-Oin-079389	Oryza indica	31.27	2.00e-28	119.00
IUUC-Olo-080916	Oryza longistaminata	30.39	1.00e-16	79.00
IUUC-Ome-081471	Oryza meridionalis	37.76	2.00e-40	159.00
IUUC-Oni-082449	Oryza nivara	37.76	4.00e-40	159.00
IUUC-Opu-083210	Oryza punctata	37.76	2.00e-42	166.00
IUUC-Oru-085159	Oryza rufipogon	38.27	5.00e-43	168.00
IUUC-Osa-085926	Oryza sativa	39.86	6.00e-33	133.00
IUUC-Ola-087084	Oryzias latipes	71.28	2.00e-123	436.00
IUUC-Olu-087853	Ostreococcus lucimarinus	29.39	3.00e-30	125.00
IUUC-Oga-089008	Otolemur garnettii	93.62	1.00e-159	556.00
IUUC-Oar-089259	Ovis aries	95.02	8.00e-162	563.00
IUUC-Ptr-091112	Pan troglodytes	98.20	3.00e-164	571.00
IUUC-Psi-093050	Pelodiscus sinensis	83.75	3.00e-144	504.00
IUUC-Pma-094259	Petromyzon marinus	59.38	1.00e-91	330.00
IUUC-Pno-094798	Phaeosphaeria nodorum	34.59	3.00e-45	176.00
IUUC-Ppa-095477	Physcomitrella patens	37.50	1.00e-44	174.00
IUUC-Pfo-096855	Poecilia formosa	72.08	1.00e-121	429.00
IUUC-Pab-098096	Pongo abelii	98.93	3.00e-167	581.00
IUUC-Pop-098800	Populus trichocarpa	36.40	3.00e-45	176.00
IUUC-Pca-100187	Procavia capensis	91.75	8.00e-113	400.00
IUUC-Ppe-101759	Prunus persica	36.00	2.00e-43	170.00
IUUC-Pva-102438	Pteropus vampyrus	78.54	2.00e-92	332.00
IUUC-Pte-104197	Pyrenophora teres	37.01	2.00e-42	166.00
IUUC-Pyt-104421	Pyrenophora triticirepentis	36.19	6.00e-42	164.00
IUUC-Rno-106087	Rattus norvegicus	93.59	2.00e-160	558.00
IUUC-Sce-106276	Saccharomyces cerevisiae	26.80	2.00e-12	67.40
IUUC-Sha-106831	Sarcophilus harrisii	81.91	4.00e-139	487.00
IUUC-Sja-107681	Schizosaccharomyces japonicus	37.98	2.00e-51	196.00
IUUC-Spo-108294	Schizosaccharomyces pombe	40.07	4.00e-57	215.00
IUUC-Ssl-108613	Sclerotinia sclerotiorum	37.35	3.00e-46	179.00
IUUC-Smo-109008	Selaginella moellendorffii	41.10	1.00e-55	210.00
IUUC-Sit-110300	Setaria italica	36.73	1.00e-40	160.00
IUUC-Sly-111441	Solanum lycopersicum	33.09	5.00e-37	148.00
IUUC-Stu-111995	Solanum tuberosum	36.00	8.00e-37	148.00
IUUC-Sar-113196	Sorex araneus	81.08	5.00e-66	244.00
IUUC-Sbi-113790	Sorghum bicolor	38.86	2.00e-43	170.00
IUUC-Ssc-115609	Sus scrofa	94.66	1.00e-162	565.00
IUUC-Tgu-116927	Taeniopygia guttata	82.98	1.00e-136	479.00
IUUC-Tru-118164	Takifugu rubripes	73.40	2.00e-126	445.00
IUUC-Tsy-119151	Tarsius syrichta	86.12	1.00e-143	502.00
IUUC-Tni-120896	Tetraodon nigroviridis	72.34	7.00e-117	413.00
IUUC-Tca-121592	Theobroma cacao	36.89	2.00e-44	173.00
IUUC-Tre-122023	Trichoderma reesei	36.04	1.00e-46	180.00
IUUC-Tvi-122507	Trichoderma virens	38.26	2.00e-47	183.00
IUUC-Tae-125730	Triticum aestivum	38.78	3.00e-42	166.00
IUUC-Tur-126092	Triticum urartu	38.66	8.00e-23	101.00
IUUC-Tbe-127422	Tupaia belangeri	72.77	1.00e-87	316.00
IUUC-Ttr-129097	Tursiops truncatus	90.75	4.00e-155	540.00
IUUC-Vda-130014	Verticillium dahliae	35.28	7.00e-46	178.00
IUUC-Vpa-130782	Vicugna pacos	94.31	2.00e-161	561.00
IUUC-Vvi-131494	Vitis vinifera	33.73	8.00e-44	171.00
IUUC-Xtr-132165	Xenopus tropicalis	78.37	1.00e-135	476.00
IUUC-Xma-133205	Xiphophorus maculatus	72.70	2.00e-124	439.00
IUUC-Yli-134614	Yarrowia lipolytica	35.67	6.00e-52	198.00
IUUC-Zma-135861	Zea mays	38.95	4.00e-42	165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence