iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pma-094542

UUCD1 version

UUC-PeM-00257

Ensembl Protein ID

ENSPMAP00000000064.1

UniProt Accession

S4R4D5; S4R4D5_PETMA

Protein Name

Uncharacterized protein

Gene Name

WDR1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000000052.1	ENSPMAT00000000064.1	ENSPMAP00000000064.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-39	130.5	235	267
UBD/Beta-Prp	1.30e-66	224.0	57	359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H ++++++++  d   l+s+s+D t+++WD+ t
   Q: 235  HDGGIYAISWsADsSQLISASGDRTVRLWDVAT 267
           99*********44489**************976 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae...vtavkfspdgkilvtgseD....rtikvwdlstgkcvh 88
           ++h++++ + k++p++ ++a+g  +g++++wd t++  + +++ +  +   ++++++s+d+k ++ ++e     +++ +wd  +g+ v 
   Q: 57   TEHSHQVLVAKYAPSGFYIASGDVSGKLRIWDSTQKEHILKYEYQP-FggkIKDISWSEDSKRIAIVGEGrekyGAVILWD--SGSSVG 142
           4677778889*************************88877764333.2245***********9999999999998999998..6999** PP
   S: 89   tlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl. 175
            + gh++++ s+++ ps+ ++lv++s+d+    ++ +  +    tl  h+++vnc++++pdg  ++++++D+++ ++d  +g+ +  l 
   Q: 143  EIAGHTKTINSVDIRPSRpYRLVTASDDNCGAFYHGPPFKFQF-TLMDHTRFVNCIRFSPDGARFATAGADGQIFVYDGTSGQKICALg 230
           ****************999***************999999998.********************************************9 PP
   S: 176  .tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec............................................vrtln 219
             ++h++ +y +s++ ++ +l+s+s d+tv+lwd+ t++                                             +r  +
   Q: 231  gDKAHDGGIYAISWSADSSQLISASGDRTVRLWDVATSTAtttfsmgpdvsdqqlgclwqgshmlsislsghinyldannpskpIRVIK 319
           9667********************************77777778888888999999999999999999999999999999999999999 PP
   S: 220  ghtdnvksvrfs.....pnderlvsgssDgsiriWdlrsg 254
           gh+++v+ +++      + +  +++gs Dg i+iWd +sg
   Q: 320  GHSKPVQALALNipkdkDGQATIYTGSIDGHINIWDAKSG 359
           9999999999999888777888999999999999999886 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

VCLCVPLESL YASLPQVERG VAKVIGGDPK GNNFLYTNGK SVIIRNIENP AISDVYTEHS 60
HQVLVAKYAP SGFYIASGDV SGKLRIWDST QKEHILKYEY QPFGGKIKDI SWSEDSKRIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTGTCTTT GTGTGCCATT AGAAAGCTTG TATGCCAGCC TTCCACAGGT GGAGAGAGGT 60
GTTGCAAAGG TTATCGGAGG AGACCCGAAA GGGAACAACT TCCTCTACAC CAACGGCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	33.79	3.00e-77	281.00
IUUC-Aml-002368	Ailuropoda melanoleuca	69.72	0.00e+00	894.00
IUUC-Atr-003160	Amborella trichopoda	35.60	1.00e-111	395.00
IUUC-Apl-004012	Anas platyrhynchos	69.69	0.00e+00	879.00
IUUC-Aca-004707	Anolis carolinensis	67.71	0.00e+00	875.00
IUUC-Ago-007920	Ashbya gossypii	29.86	5.00e-78	283.00
IUUC-Afl-008471	Aspergillus flavus	32.76	7.00e-82	296.00
IUUC-Bol-016043	Brassica oleracea	34.47	4.00e-101	360.00
IUUC-Cja-019952	Callithrix jacchus	68.86	0.00e+00	868.00
IUUC-Cfa-020225	Canis familiaris	70.02	0.00e+00	894.00
IUUC-Cpo-021900	Cavia porcellus	69.97	0.00e+00	899.00
IUUC-Cho-025030	Choloepus hoffmanni	52.81	6.00e-169	585.00
IUUC-Cin-025152	Ciona intestinalis	53.17	5.00e-78	282.00
IUUC-Dno-029383	Dasypus novemcinctus	69.85	0.00e+00	868.00
IUUC-Dor-030633	Dipodomys ordii	68.32	0.00e+00	818.00
IUUC-Dme-031597	Drosophila melanogaster	46.46	3.00e-165	573.00
IUUC-Ete-032780	Echinops telfairi	65.38	0.00e+00	810.00
IUUC-Eca-034306	Equus caballus	69.04	0.00e+00	870.00
IUUC-Fca-036301	Felis catus	69.97	0.00e+00	911.00
IUUC-Fal-037361	Ficedula albicollis	70.72	0.00e+00	929.00
IUUC-Fso-038199	Fusarium solani	34.95	7.00e-100	356.00
IUUC-Gga-040235	Gallus gallus	70.35	0.00e+00	893.00
IUUC-Hvu-047517	Hordeum vulgare	33.33	5.00e-103	367.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	69.62	0.00e+00	889.00
IUUC-Kpa-049183	Komagataella pastoris	33.01	1.00e-88	319.00
IUUC-Lma-053313	Leptosphaeria maculans	39.38	5.00e-121	429.00
IUUC-Mcc-055619	Macaca mulatta	68.47	0.00e+00	858.00
IUUC-Mpo-057557	Magnaporthe poae	29.31	2.00e-65	241.00
IUUC-Mga-060150	Meleagris gallopavo	70.23	0.00e+00	897.00
IUUC-Mdo-062674	Monodelphis domestica	69.03	0.00e+00	895.00
IUUC-Mpu-066001	Mustela putorius furo	67.46	0.00e+00	872.00
IUUC-Nle-070115	Nomascus leucogenys	67.31	0.00e+00	800.00
IUUC-Oan-073594	Ornithorhynchus anatinus	63.91	5.00e-116	409.00
IUUC-Ocu-074824	Oryctolagus cuniculus	67.71	0.00e+00	840.00
IUUC-Oar-089986	Ovis aries	64.73	0.00e+00	846.00
IUUC-Ptr-091281	Pan troglodytes	69.87	0.00e+00	888.00
IUUC-Psi-093811	Pelodiscus sinensis	69.23	0.00e+00	927.00
IUUC-Pno-095086	Phaeosphaeria nodorum	36.98	4.00e-112	397.00
IUUC-Pop-098850	Populus trichocarpa	35.92	9.00e-110	389.00
IUUC-Pca-100257	Procavia capensis	41.86	2.00e-58	218.00
IUUC-Ppe-101578	Prunus persica	36.51	7.00e-114	402.00
IUUC-Pva-102872	Pteropus vampyrus	67.22	0.00e+00	874.00
IUUC-Pte-104365	Pyrenophora teres	38.57	3.00e-112	397.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	38.25	1.00e-115	408.00
IUUC-Sha-107084	Sarcophilus harrisii	66.43	0.00e+00	776.00
IUUC-Ssl-108408	Sclerotinia sclerotiorum	35.76	4.00e-109	387.00
IUUC-Smo-109255	Selaginella moellendorffii	34.26	7.00e-103	366.00
IUUC-Sly-110897	Solanum lycopersicum	36.45	1.00e-107	382.00
IUUC-Stu-111971	Solanum tuberosum	36.13	4.00e-107	380.00
IUUC-Tgu-117256	Taeniopygia guttata	70.35	0.00e+00	928.00
IUUC-Tre-122076	Trichoderma reesei	35.83	4.00e-96	343.00
IUUC-Tvi-122528	Trichoderma virens	35.54	3.00e-100	357.00
IUUC-Tae-123530	Triticum aestivum	34.25	2.00e-103	367.00
IUUC-Tur-126845	Triticum urartu	33.09	2.00e-76	278.00
IUUC-Tme-127217	Tuber melanosporum	34.98	5.00e-106	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence