iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076510

Ensembl Protein ID

OB03G29670.1

UniProt Accession

J3LPJ1; J3LPJ1_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G29670	OB03G29670.1	OB03G29670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-27	93.5	280	312
UBD/Beta-Prp	5.00e-43	148.0	273	485

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gHt +v++++f +   +ll+s+s D++ik+WD+
   Q: 280  GHTKGVSAIRFfPKygHLLLSASMDCKIKIWDV 312
           8*********995555889*************7 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh 179
            cvh + gh++ v +++f+p +g+ l+s+s d  i++wd+ e+++c++ t  gh+++v+ ++++ dg+ + s+++Dr ++ Wd +tg+++ t++ g+
   Q: 273  RCVHEWVGHTKGVSAIRFFPkYGHLLLSASMDCKIKIWDVlESRTCMR-TYMGHSKAVRDISFSNDGSKFLSAGYDRNIQYWDTETGQVISTFSTGK 368
           678888888888888888887778888888888888888536777777.888888888888888888888888888888888888888888887778 PP
   S: 180  tdsvyslsfdsngke.lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsf 275
            ++v +l+ d+++++ l++g  d+++  wd+++g++ +++  h   v+ + f +n+ r+v+ s+D+s+r+W      ++k ++ ++ +++++  l++
   Q: 369  VPYVVKLNPDEDKQHiLLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP 465
           8888888866666441567777888888888888888888888888888888888888888888888888888888888888888877777777788 PP
   S: 276  gdnvlvlgsedskvniwklk 295
           + n l++ s d+++ i++ k
   Q: 466  NSNWLAAQSLDNQILIYSTK 485
           88888888888888887765 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDLLQSSYTP DEEEGDEERP LSSPDASPLR LPSKSAAPSV DDTALALSSA AASTSRPLDP 60
SLHLVPFNPT ADQLWAPVLG PQHPHAPISS ASGNRNHKLG HVEDAAVLPF LFDEQYNTFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTCC TCCAGTCCTC GTACACGCCG GACGAGGAGG AGGGCGACGA GGAGCGGCCC 60
CTCTCCTCCC CGGACGCCTC CCCGCTCCGC CTCCCCTCCA AGTCGGCGGC CCCCTCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

obr:102714272

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	89.34	0.00e+00	977.00
IUUC-Aml-002243	Ailuropoda melanoleuca	45.06	5.00e-91	327.00
IUUC-Atr-002502	Amborella trichopoda	73.27	0.00e+00	789.00
IUUC-Apl-003885	Anas platyrhynchos	50.76	6.00e-148	516.00
IUUC-Aca-004854	Anolis carolinensis	36.21	6.00e-82	297.00
IUUC-Aly-006158	Arabidopsis lyrata	71.38	0.00e+00	791.00
IUUC-Ath-007474	Arabidopsis thaliana	72.18	0.00e+00	769.00
IUUC-Ago-007726	Ashbya gossypii	39.83	3.00e-70	258.00
IUUC-Acl-008220	Aspergillus clavatus	41.04	2.00e-114	405.00
IUUC-Afl-008473	Aspergillus flavus	40.97	4.00e-112	397.00
IUUC-Afu-008773	Aspergillus fumigatus	42.02	5.00e-116	410.00
IUUC-Ani-009323	Aspergillus nidulans	39.80	2.00e-100	358.00
IUUC-Ang-009851	Aspergillus niger	50.14	6.00e-109	387.00
IUUC-Aor-009950	Aspergillus oryzae	40.97	4.00e-112	397.00
IUUC-Ate-010372	Aspergillus terreus	41.13	5.00e-114	404.00
IUUC-Ame-011660	Astyanax mexicanus	51.05	2.00e-146	511.00
IUUC-Bgr-012230	Blumeria graminis	40.11	4.00e-109	387.00
IUUC-Bta-012568	Bos taurus	50.95	1.00e-146	511.00
IUUC-Bci-013646	Botrytis cinerea	41.65	2.00e-109	388.00
IUUC-Bdi-014199	Brachypodium distachyon	90.40	0.00e+00	982.00
IUUC-Bol-015695	Brassica oleracea	71.11	0.00e+00	792.00
IUUC-Bra-017923	Brassica rapa	71.88	0.00e+00	811.00
IUUC-Cel-018535	Caenorhabditis elegans	38.41	4.00e-117	414.00
IUUC-Cja-019071	Callithrix jacchus	49.38	4.00e-147	513.00
IUUC-Cfa-020559	Canis familiaris	50.76	4.00e-146	510.00
IUUC-Cpo-022356	Cavia porcellus	51.14	4.00e-147	513.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	47.94	5.00e-88	316.00
IUUC-Csa-023125	Chlorocebus sabaeus	49.38	3.00e-147	514.00
IUUC-Cho-024676	Choloepus hoffmanni	48.10	9.00e-137	479.00
IUUC-Cin-025229	Ciona intestinalis	49.71	3.00e-143	500.00
IUUC-Csv-025868	Ciona savignyi	65.22	2.00e-35	139.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	47.37	1.00e-95	342.00
IUUC-Cne-026885	Cryptococcus neoformans	58.53	4.00e-125	440.00
IUUC-Dre-027631	Danio rerio	51.31	1.00e-149	522.00
IUUC-Dno-029815	Dasypus novemcinctus	48.13	1.00e-143	502.00
IUUC-Dor-031143	Dipodomys ordii	62.50	1.00e-129	456.00
IUUC-Dse-031520	Dothistroma septosporum	47.28	3.00e-98	351.00
IUUC-Dme-032050	Drosophila melanogaster	47.27	2.00e-142	498.00
IUUC-Ete-032866	Echinops telfairi	49.81	4.00e-142	497.00
IUUC-Eca-033384	Equus caballus	48.94	7.00e-145	506.00
IUUC-Eeu-034471	Erinaceus europaeus	39.75	2.00e-98	352.00
IUUC-Fca-035727	Felis catus	50.95	1.00e-146	512.00
IUUC-Fal-036774	Ficedula albicollis	51.14	3.00e-149	521.00
IUUC-Fox-037951	Fusarium oxysporum	50.88	3.00e-107	381.00
IUUC-Fso-038287	Fusarium solani	52.35	6.00e-107	380.00
IUUC-Gmo-039670	Gadus morhua	49.38	8.00e-149	519.00
IUUC-Ggr-039764	Gaeumannomyces graminis	48.83	3.00e-103	367.00
IUUC-Gga-040293	Gallus gallus	50.57	5.00e-149	520.00
IUUC-Gac-042159	Gasterosteus aculeatus	51.04	2.00e-147	514.00
IUUC-Gma-044299	Glycine max	73.58	0.00e+00	771.00
IUUC-Ggo-044864	Gorilla gorilla	50.95	5.00e-147	513.00
IUUC-Hsa-046602	Homo sapiens	50.95	5.00e-147	513.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	63.64	5.00e-135	473.00
IUUC-Kpa-049318	Komagataella pastoris	46.41	4.00e-91	327.00
IUUC-Lch-049796	Latimeria chalumnae	45.09	6.00e-121	427.00
IUUC-Lpe-051153	Leersia perrieri	95.10	0.00e+00	1041.00
IUUC-Loc-052467	Lepisosteus oculatus	51.12	4.00e-150	524.00
IUUC-Lma-053107	Leptosphaeria maculans	51.47	1.00e-105	375.00
IUUC-Laf-053787	Loxodonta africana	51.80	2.00e-150	525.00
IUUC-Mcc-055706	Macaca mulatta	49.12	3.00e-147	514.00
IUUC-Meu-056757	Macropus eugenii	60.30	1.00e-116	412.00
IUUC-Mor-057079	Magnaporthe oryzae	50.00	3.00e-105	374.00
IUUC-Mpo-057533	Magnaporthe poae	49.42	2.00e-104	371.00
IUUC-Mtr-057950	Medicago truncatula	70.43	0.00e+00	794.00
IUUC-Mla-058910	Melampsora laricipopulina	46.06	1.00e-138	486.00
IUUC-Mga-059366	Meleagris gallopavo	50.57	4.00e-149	520.00
IUUC-Mvi-060349	Microbotryum violaceum	57.89	2.00e-122	432.00
IUUC-Mmr-061209	Microcebus murinus	49.47	3.00e-150	524.00
IUUC-Mdo-062118	Monodelphis domestica	50.76	9.00e-149	519.00
IUUC-Mmu-063173	Mus musculus	50.95	5.00e-147	513.00
IUUC-Mac-065080	Musa acuminata	74.59	0.00e+00	796.00
IUUC-Mpu-066659	Mustela putorius furo	49.12	7.00e-147	513.00
IUUC-Mlu-067029	Myotis lucifugus	50.57	4.00e-146	510.00
IUUC-Nfi-068334	Neosartorya fischeri	42.69	2.00e-116	412.00
IUUC-Ncr-068675	Neurospora crassa	48.55	1.00e-92	332.00
IUUC-Nle-070113	Nomascus leucogenys	50.95	4.00e-147	513.00
IUUC-Opr-070685	Ochotona princeps	47.87	2.00e-145	508.00
IUUC-Ont-071680	Oreochromis niloticus	50.77	3.00e-148	517.00
IUUC-Oan-073573	Ornithorhynchus anatinus	49.80	5.00e-135	473.00
IUUC-Ocu-074074	Oryctolagus cuniculus	49.73	5.00e-150	523.00
IUUC-Oba-075625	Oryza barthii	96.51	0.00e+00	1060.00
IUUC-Ogl-077275	Oryza glaberrima	96.51	0.00e+00	1060.00
IUUC-Ogu-078563	Oryza glumaepatula	96.34	0.00e+00	1057.00
IUUC-Oin-079898	Oryza indica	98.52	0.00e+00	796.00
IUUC-Olo-081080	Oryza longistaminata	93.15	0.00e+00	911.00
IUUC-Oni-083121	Oryza nivara	96.34	0.00e+00	1058.00
IUUC-Opu-083329	Oryza punctata	96.33	0.00e+00	1052.00
IUUC-Oru-084807	Oryza rufipogon	96.19	0.00e+00	951.00
IUUC-Osa-086039	Oryza sativa	96.52	0.00e+00	1061.00
IUUC-Ola-087149	Oryzias latipes	50.67	4.00e-149	520.00
IUUC-Olu-087627	Ostreococcus lucimarinus	47.21	7.00e-137	479.00
IUUC-Oga-088359	Otolemur garnettii	50.95	5.00e-147	513.00
IUUC-Oar-089390	Ovis aries	50.76	3.00e-146	511.00
IUUC-Ptr-090894	Pan troglodytes	50.95	5.00e-147	513.00
IUUC-Pan-092476	Papio anubis	49.12	3.00e-147	514.00
IUUC-Psi-093527	Pelodiscus sinensis	49.39	4.00e-133	467.00
IUUC-Pno-094771	Phaeosphaeria nodorum	49.43	5.00e-104	370.00
IUUC-Ppa-095386	Physcomitrella patens	69.88	0.00e+00	781.00
IUUC-Pfo-096139	Poecilia formosa	50.57	7.00e-150	523.00
IUUC-Pab-097838	Pongo abelii	48.11	2.00e-124	437.00
IUUC-Pop-099962	Populus trichocarpa	72.81	0.00e+00	809.00
IUUC-Pca-100876	Procavia capensis	43.21	6.00e-116	410.00
IUUC-Ppe-101777	Prunus persica	72.56	0.00e+00	790.00
IUUC-Pva-102418	Pteropus vampyrus	50.76	2.00e-146	511.00
IUUC-Pgr-103456	Puccinia graminis	49.81	1.00e-147	515.00
IUUC-Ptt-103731	Puccinia triticina	47.81	1.00e-134	472.00
IUUC-Pte-104386	Pyrenophora teres	50.59	1.00e-103	369.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	49.43	2.00e-103	368.00
IUUC-Rno-105694	Rattus norvegicus	47.89	7.00e-140	489.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.68	3.00e-74	271.00
IUUC-Sha-106709	Sarcophilus harrisii	50.76	6.00e-148	516.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	37.40	3.00e-105	374.00
IUUC-Spo-108331	Schizosaccharomyces pombe	48.69	4.00e-101	361.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	41.53	4.00e-97	347.00
IUUC-Smo-109326	Selaginella moellendorffii	58.48	3.00e-179	620.00
IUUC-Sit-110446	Setaria italica	93.58	0.00e+00	988.00
IUUC-Sly-111330	Solanum lycopersicum	70.47	0.00e+00	772.00
IUUC-Stu-112610	Solanum tuberosum	68.61	0.00e+00	776.00
IUUC-Sar-113065	Sorex araneus	45.45	8.00e-34	137.00
IUUC-Sbi-114005	Sorghum bicolor	89.55	0.00e+00	947.00
IUUC-Sre-114988	Sporisorium reilianum	46.49	9.00e-137	479.00
IUUC-Ssc-115760	Sus scrofa	49.38	5.00e-147	513.00
IUUC-Tgu-116493	Taeniopygia guttata	50.95	1.00e-150	525.00
IUUC-Tru-118489	Takifugu rubripes	51.60	1.00e-149	522.00
IUUC-Tsy-119332	Tarsius syrichta	51.33	6.00e-150	523.00
IUUC-Tni-120202	Tetraodon nigroviridis	49.62	1.00e-140	492.00
IUUC-Tca-121429	Theobroma cacao	69.90	0.00e+00	805.00
IUUC-Tre-122162	Trichoderma reesei	53.22	7.00e-110	390.00
IUUC-Tvi-122500	Trichoderma virens	52.63	4.00e-109	387.00
IUUC-Tae-125557	Triticum aestivum	90.05	0.00e+00	991.00
IUUC-Tur-126554	Triticum urartu	89.84	0.00e+00	984.00
IUUC-Tme-126919	Tuber melanosporum	44.59	1.00e-122	432.00
IUUC-Tbe-127968	Tupaia belangeri	46.70	8.00e-136	476.00
IUUC-Ttr-129215	Tursiops truncatus	50.76	1.00e-144	506.00
IUUC-Uma-129622	Ustilago maydis	46.07	8.00e-138	483.00
IUUC-Vda-129750	Verticillium dahliae	52.34	3.00e-109	387.00
IUUC-Vpa-130617	Vicugna pacos	50.19	5.00e-143	499.00
IUUC-Vvi-131238	Vitis vinifera	71.86	0.00e+00	814.00
IUUC-Xtr-131865	Xenopus tropicalis	51.04	8.00e-148	516.00
IUUC-Xma-133627	Xiphophorus maculatus	50.95	1.00e-150	525.00
IUUC-Yli-134390	Yarrowia lipolytica	49.42	1.00e-102	365.00
IUUC-Zma-134910	Zea mays	93.01	0.00e+00	969.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence