iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114776

Ensembl Protein ID

Sb04g031060.1

UniProt Accession

C5Y0G2; C5Y0G2_SORBI

Genbank Protein ID

EES05681.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G273300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031060	Sb04g031060.1	Sb04g031060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.90e-247	800.5	381	456
ULD/UDP/UBQ/UBQ_PIM	2.20e-168	547.4	381	453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 381  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 381  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 453
           99********************************************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCCTCAG ACCAGATTCC GATCAATCAC CCATAAGCTC CCCCCAAATC TGTTCCTCGT 60
CTCCCGTCTC GCGGTTTCCT ACTTCCCTCG GACGCCTCCG GCAAGTCGCT CGACCGCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

sbi:SORBI_04g031060

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000772	Aegilops tauschii	48.19	2.00e-49	190.00
IUUC-Aly-006333	Arabidopsis lyrata	99.78	0.00e+00	906.00
IUUC-Ath-006600	Arabidopsis thaliana	100.00	0.00e+00	900.00
IUUC-Bol-015598	Brassica oleracea	100.00	0.00e+00	900.00
IUUC-Cel-018571	Caenorhabditis elegans	95.83	0.00e+00	876.00
IUUC-Cfa-020579	Canis familiaris	95.80	0.00e+00	727.00
IUUC-Cin-025600	Ciona intestinalis	96.06	0.00e+00	738.00
IUUC-Csv-026265	Ciona savignyi	94.74	0.00e+00	872.00
IUUC-Cne-026938	Cryptococcus neoformans	98.47	0.00e+00	895.00
IUUC-Dre-028321	Danio rerio	95.84	0.00e+00	871.00
IUUC-Dno-029812	Dasypus novemcinctus	95.80	0.00e+00	727.00
IUUC-Dme-031687	Drosophila melanogaster	95.63	0.00e+00	871.00
IUUC-Gac-042568	Gasterosteus aculeatus	95.63	0.00e+00	867.00
IUUC-Gma-043881	Glycine max	100.00	0.00e+00	900.00
IUUC-Ggo-044799	Gorilla gorilla	95.79	0.00e+00	725.00
IUUC-Hsa-046405	Homo sapiens	96.05	0.00e+00	870.00
IUUC-Laf-053548	Loxodonta africana	95.80	0.00e+00	727.00
IUUC-Mcc-055561	Macaca mulatta	95.84	0.00e+00	873.00
IUUC-Mtr-058615	Medicago truncatula	100.00	0.00e+00	900.00
IUUC-Mla-058957	Melampsora laricipopulina	99.78	0.00e+00	899.00
IUUC-Mdo-062630	Monodelphis domestica	96.05	0.00e+00	870.00
IUUC-Mmu-063593	Mus musculus	96.05	0.00e+00	873.00
IUUC-Mpu-066106	Mustela putorius furo	81.25	5.00e-135	472.00
IUUC-Obr-076236	Oryza brachyantha	99.78	0.00e+00	902.00
IUUC-Ogu-078628	Oryza glumaepatula	96.10	8.00e-39	154.00
IUUC-Oin-079857	Oryza indica	99.78	0.00e+00	902.00
IUUC-Osa-085328	Oryza sativa	99.78	0.00e+00	901.00
IUUC-Ola-087192	Oryzias latipes	95.74	0.00e+00	845.00
IUUC-Oga-089171	Otolemur garnettii	96.05	1.00e-81	294.00
IUUC-Oar-089386	Ovis aries	90.57	0.00e+00	811.00
IUUC-Ptr-091261	Pan troglodytes	95.80	0.00e+00	727.00
IUUC-Pan-092134	Papio anubis	96.05	0.00e+00	871.00
IUUC-Psi-093239	Pelodiscus sinensis	74.12	2.00e-179	620.00
IUUC-Pma-094556	Petromyzon marinus	95.29	0.00e+00	763.00
IUUC-Ppa-095624	Physcomitrella patens	98.68	0.00e+00	889.00
IUUC-Pab-097884	Pongo abelii	96.05	0.00e+00	870.00
IUUC-Pca-100992	Procavia capensis	95.98	0.00e+00	662.00
IUUC-Ppe-102064	Prunus persica	100.00	0.00e+00	900.00
IUUC-Pgr-103301	Puccinia graminis	100.00	0.00e+00	900.00
IUUC-Rno-105199	Rattus norvegicus	96.05	0.00e+00	872.00
IUUC-Smo-109245	Selaginella moellendorffii	98.68	0.00e+00	889.00
IUUC-Sit-110644	Setaria italica	100.00	0.00e+00	889.00
IUUC-Sly-111036	Solanum lycopersicum	100.00	0.00e+00	900.00
IUUC-Stu-112104	Solanum tuberosum	100.00	0.00e+00	900.00
IUUC-Ssc-115672	Sus scrofa	96.05	0.00e+00	870.00
IUUC-Tca-120959	Theobroma cacao	99.78	0.00e+00	898.00
IUUC-Tae-123654	Triticum aestivum	99.78	0.00e+00	902.00
IUUC-Tur-126025	Triticum urartu	100.00	0.00e+00	905.00
IUUC-Ttr-128311	Tursiops truncatus	95.61	0.00e+00	867.00
IUUC-Uma-129417	Ustilago maydis	98.47	0.00e+00	895.00
IUUC-Vvi-131563	Vitis vinifera	100.00	0.00e+00	900.00
IUUC-Xtr-132052	Xenopus tropicalis	95.61	0.00e+00	865.00
IUUC-Yli-134420	Yarrowia lipolytica	97.16	0.00e+00	887.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence