iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
circBase
Protein-protein Interaction
IID	iRefIndex	PINA
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	7.40e-08	32.5	208	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 13   ltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihll 70
           ++l+v  sdt+  +K +i ++ ++   + r++++Gk+Led+++La+y++++g  i l+
   Q: 208  WKLRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLY 265
           55568889********************************************988776 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSEPSNLVSK FQKLRVEASK IQNEFKEKPS YTLFKETLDI SEKLLEKQFE FNDEMKQIQQ 60
NVMSELKSVK KELKQATSIK DLLEILEIIQ KIFKKQDEFQ QVQENQNKSI ENLNSELKTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAAATGTC GGAGCCGAGC AATTTGGTGT CTAAATTTCA AAAACTTCGC GTTGAAGCTT 60
CCAAGATACA GAATGAGTTT AAAGAGGTTT AGTTTTCGAG CTTACACATT ATAAGAACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Gene Ontology

GO:0005694--C:chromosome
GO:0003677--F:DNA binding
GO:0003917--F:DNA topoisomerase type I activity
GO:0006265--P:DNA topological change

KEGG

cel:CELE_C16C8.16

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001695	Ailuropoda melanoleuca	22.31	1.00e-04	41.60
IUUC-Dno-029412	Dasypus novemcinctus	24.79	2.00e-04	40.40
IUUC-Eca-033592	Equus caballus	23.97	5.00e-04	39.30
IUUC-Fca-036438	Felis catus	23.58	1.80e-01	30.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence