iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026516

Ensembl Protein ID

ELA37933

UniProt Accession

L2GIU9; L2GIU9_COLGN

Genbank Protein ID

ELA37933.1

Protein Name

WD repeat protein

Genbank Nucleotide ID

KB020295

Gene Name

CGGC5_2856

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_2856	ELA37933	ELA37933

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-12	46.9	143	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+ svt++a  ++ + ++s+s D+t+++WD++t
   Q: 143  GHEKSVTDIAVhPGaDNFISCSQDNTVRLWDVST 176
           8**********988999**************976 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MASTPMDLDY RDSTPANGTS LNITRSLNAN NTSQLSDVVS TFRPTKLFKR DDIKDGRPQP 60
HVLSLDFDDP GELLMTSESD ETIQIYNVKE GRHEKSLLSK KYGVKLAKFT HTSSSILYAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGA CACCCATGGA TCTGGACTAC CGGGACTCTA CTCCTGCCAA TGGAACTTCG 60
CTGAATATCA CGCGATCGCT GAACGCAAAT AACACTTCTC AATTGAGCGA TGTTGTCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	29.88	3.00e-32	130.00
IUUC-Aml-001221	Ailuropoda melanoleuca	35.13	8.00e-51	192.00
IUUC-Atr-002607	Amborella trichopoda	30.37	1.00e-35	141.00
IUUC-Apl-003817	Anas platyrhynchos	34.50	3.00e-47	181.00
IUUC-Aca-005383	Anolis carolinensis	34.19	5.00e-49	186.00
IUUC-Aly-005437	Arabidopsis lyrata	29.70	4.00e-35	140.00
IUUC-Ath-006793	Arabidopsis thaliana	29.70	4.00e-35	140.00
IUUC-Ago-007804	Ashbya gossypii	34.28	2.00e-50	191.00
IUUC-Acl-008217	Aspergillus clavatus	48.74	3.00e-95	340.00
IUUC-Afl-008539	Aspergillus flavus	48.59	2.00e-94	337.00
IUUC-Afu-009105	Aspergillus fumigatus	49.44	3.00e-96	343.00
IUUC-Ani-009474	Aspergillus nidulans	46.15	4.00e-87	313.00
IUUC-Ang-009858	Aspergillus niger	48.19	4.00e-94	336.00
IUUC-Aor-009955	Aspergillus oryzae	48.59	2.00e-94	337.00
IUUC-Ate-010364	Aspergillus terreus	49.72	2.00e-94	337.00
IUUC-Ame-010661	Astyanax mexicanus	34.80	1.00e-46	179.00
IUUC-Bgr-012008	Blumeria graminis	52.86	2.00e-110	390.00
IUUC-Bta-013022	Bos taurus	34.88	1.00e-47	182.00
IUUC-Bci-013966	Botrytis cinerea	49.24	2.00e-102	363.00
IUUC-Bdi-015066	Brachypodium distachyon	31.40	7.00e-37	145.00
IUUC-Bol-016019	Brassica oleracea	30.00	6.00e-36	142.00
IUUC-Bra-017871	Brassica rapa	30.30	2.00e-36	144.00
IUUC-Cel-018276	Caenorhabditis elegans	32.09	2.00e-42	164.00
IUUC-Cja-019309	Callithrix jacchus	35.13	8.00e-51	192.00
IUUC-Cfa-020345	Canis familiaris	35.13	8.00e-51	192.00
IUUC-Cpo-022227	Cavia porcellus	32.40	2.00e-39	154.00
IUUC-Csa-023267	Chlorocebus sabaeus	34.56	3.00e-50	190.00
IUUC-Cho-024409	Choloepus hoffmanni	30.18	1.00e-33	135.00
IUUC-Cin-025628	Ciona intestinalis	34.47	2.00e-48	183.00
IUUC-Csv-026164	Ciona savignyi	34.57	1.00e-47	181.00
IUUC-Cne-026890	Cryptococcus neoformans	31.54	3.00e-41	160.00
IUUC-Cme-027288	Cyanidioschyzon merolae	30.21	5.00e-38	149.00
IUUC-Dre-028001	Danio rerio	34.65	2.00e-49	187.00
IUUC-Dno-029056	Dasypus novemcinctus	35.13	8.00e-51	192.00
IUUC-Dor-031078	Dipodomys ordii	32.77	3.00e-25	106.00
IUUC-Dse-031152	Dothistroma septosporum	49.44	4.00e-92	329.00
IUUC-Dme-032085	Drosophila melanogaster	34.94	7.00e-51	192.00
IUUC-Ete-033158	Echinops telfairi	35.83	6.00e-49	186.00
IUUC-Eca-033879	Equus caballus	36.24	7.00e-42	163.00
IUUC-Eeu-035229	Erinaceus europaeus	31.10	2.00e-36	144.00
IUUC-Fca-035896	Felis catus	35.13	8.00e-51	192.00
IUUC-Fal-036843	Ficedula albicollis	34.50	3.00e-47	181.00
IUUC-Fox-037858	Fusarium oxysporum	73.13	9.00e-166	574.00
IUUC-Fso-038386	Fusarium solani	70.28	6.00e-158	548.00
IUUC-Gmo-038506	Gadus morhua	34.69	2.00e-45	175.00
IUUC-Ggr-040090	Gaeumannomyces graminis	65.63	3.00e-142	496.00
IUUC-Gga-040192	Gallus gallus	34.76	2.00e-50	191.00
IUUC-Gac-041551	Gasterosteus aculeatus	34.76	3.00e-48	183.00
IUUC-Gma-044074	Glycine max	30.82	4.00e-37	146.00
IUUC-Ggo-044584	Gorilla gorilla	34.28	3.00e-50	190.00
IUUC-Hsa-045866	Homo sapiens	35.13	8.00e-51	192.00
IUUC-Hvu-047731	Hordeum vulgare	36.82	2.00e-33	134.00
IUUC-Itr-048338	Ictidomys tridecemlineatus	35.13	8.00e-51	192.00
IUUC-Kpa-049249	Komagataella pastoris	35.63	4.00e-53	199.00
IUUC-Lch-050431	Latimeria chalumnae	34.21	2.00e-46	178.00
IUUC-Lpe-050830	Leersia perrieri	30.79	6.00e-36	142.00
IUUC-Lma-053026	Leptosphaeria maculans	49.58	8.00e-100	355.00
IUUC-Laf-054265	Loxodonta africana	33.66	1.00e-40	158.00
IUUC-Mcc-055583	Macaca mulatta	35.13	8.00e-51	192.00
IUUC-Meu-056113	Macropus eugenii	29.30	3.00e-32	130.00
IUUC-Mor-057267	Magnaporthe oryzae	63.71	3.00e-130	456.00
IUUC-Mpo-057502	Magnaporthe poae	62.92	4.00e-143	499.00
IUUC-Mtr-058607	Medicago truncatula	30.86	4.00e-37	146.00
IUUC-Mla-058815	Melampsora laricipopulina	38.36	2.00e-63	234.00
IUUC-Mga-059407	Meleagris gallopavo	36.15	1.00e-44	171.00
IUUC-Mvi-060411	Microbotryum violaceum	38.11	6.00e-63	233.00
IUUC-Mmr-061470	Microcebus murinus	35.13	8.00e-51	192.00
IUUC-Mdo-062860	Monodelphis domestica	35.13	3.00e-51	193.00
IUUC-Mmu-063105	Mus musculus	35.13	8.00e-51	192.00
IUUC-Mac-065314	Musa acuminata	31.31	4.00e-37	146.00
IUUC-Mpu-066472	Mustela putorius furo	36.30	1.00e-44	171.00
IUUC-Mlu-067073	Myotis lucifugus	35.06	9.00e-51	191.00
IUUC-Nfi-068284	Neosartorya fischeri	49.15	3.00e-96	343.00
IUUC-Ncr-068702	Neurospora crassa	62.63	6.00e-135	471.00
IUUC-Nle-069451	Nomascus leucogenys	35.13	8.00e-51	192.00
IUUC-Opr-071112	Ochotona princeps	36.30	1.00e-44	171.00
IUUC-Ont-071988	Oreochromis niloticus	34.21	4.00e-47	181.00
IUUC-Oan-072947	Ornithorhynchus anatinus	36.39	1.00e-44	171.00
IUUC-Ocu-074969	Oryctolagus cuniculus	35.13	8.00e-51	192.00
IUUC-Oba-075229	Oryza barthii	30.28	8.00e-32	129.00
IUUC-Obr-076456	Oryza brachyantha	31.40	5.00e-36	143.00
IUUC-Ogl-076973	Oryza glaberrima	31.40	5.00e-36	142.00
IUUC-Ogu-078068	Oryza glumaepatula	29.57	3.00e-31	127.00
IUUC-Oin-079656	Oryza indica	31.10	7.00e-36	142.00
IUUC-Olo-080893	Oryza longistaminata	26.22	3.00e-24	103.00
IUUC-Ome-081559	Oryza meridionalis	35.71	5.00e-22	95.50
IUUC-Oni-082990	Oryza nivara	29.97	2.00e-31	128.00
IUUC-Opu-083374	Oryza punctata	29.57	1.00e-30	125.00
IUUC-Oru-084354	Oryza rufipogon	29.97	1.00e-31	128.00
IUUC-Osa-086296	Oryza sativa	31.10	7.00e-36	142.00
IUUC-Ola-087095	Oryzias latipes	34.47	8.00e-50	188.00
IUUC-Olu-087603	Ostreococcus lucimarinus	29.48	1.00e-33	135.00
IUUC-Oga-088766	Otolemur garnettii	35.13	8.00e-51	192.00
IUUC-Oar-089565	Ovis aries	34.77	8.00e-49	185.00
IUUC-Ptr-091219	Pan troglodytes	34.08	8.00e-49	185.00
IUUC-Pan-091733	Papio anubis	35.13	8.00e-51	192.00
IUUC-Psi-092972	Pelodiscus sinensis	34.40	5.00e-46	177.00
IUUC-Pma-094332	Petromyzon marinus	35.33	1.00e-52	198.00
IUUC-Pno-094960	Phaeosphaeria nodorum	48.33	2.00e-90	323.00
IUUC-Ppa-095292	Physcomitrella patens	33.23	6.00e-42	162.00
IUUC-Pfo-096775	Poecilia formosa	34.21	6.00e-47	180.00
IUUC-Pab-097721	Pongo abelii	35.56	2.00e-49	187.00
IUUC-Pop-099608	Populus trichocarpa	31.42	1.00e-37	148.00
IUUC-Pca-100635	Procavia capensis	36.30	1.00e-41	161.00
IUUC-Ppe-101860	Prunus persica	32.21	3.00e-38	150.00
IUUC-Pva-102798	Pteropus vampyrus	34.84	3.00e-50	190.00
IUUC-Pgr-103395	Puccinia graminis	36.12	6.00e-61	226.00
IUUC-Ptt-103747	Puccinia triticina	36.68	4.00e-61	227.00
IUUC-Pte-104129	Pyrenophora teres	47.32	2.00e-87	315.00
IUUC-Pyt-104773	Pyrenophora triticirepentis	47.78	7.00e-97	345.00
IUUC-Rno-106127	Rattus norvegicus	34.46	4.00e-45	173.00
IUUC-Sce-106257	Saccharomyces cerevisiae	34.27	3.00e-49	186.00
IUUC-Sha-107529	Sarcophilus harrisii	33.43	4.00e-44	169.00
IUUC-Sja-107747	Schizosaccharomyces japonicus	34.82	1.00e-52	198.00
IUUC-Spo-108206	Schizosaccharomyces pombe	32.97	5.00e-50	189.00
IUUC-Smo-109046	Selaginella moellendorffii	33.33	2.00e-43	167.00
IUUC-Sit-109858	Setaria italica	31.50	7.00e-36	142.00
IUUC-Sly-110867	Solanum lycopersicum	31.60	2.00e-36	144.00
IUUC-Sar-113079	Sorex araneus	36.30	1.00e-44	171.00
IUUC-Sbi-114232	Sorghum bicolor	35.11	1.00e-32	131.00
IUUC-Sre-115157	Sporisorium reilianum	38.57	2.00e-59	221.00
IUUC-Ssc-116386	Sus scrofa	35.13	8.00e-51	192.00
IUUC-Tgu-116465	Taeniopygia guttata	35.76	4.00e-40	157.00
IUUC-Tru-117604	Takifugu rubripes	34.21	3.00e-47	181.00
IUUC-Tsy-119314	Tarsius syrichta	38.33	4.00e-28	116.00
IUUC-Tni-120237	Tetraodon nigroviridis	34.21	9.00e-46	176.00
IUUC-Tca-121499	Theobroma cacao	31.95	6.00e-39	154.00
IUUC-Tre-122205	Trichoderma reesei	74.04	1.00e-169	587.00
IUUC-Tvi-122471	Trichoderma virens	68.89	2.00e-152	529.00
IUUC-Tae-124428	Triticum aestivum	31.33	2.00e-37	147.00
IUUC-Tur-126512	Triticum urartu	31.99	6.00e-30	123.00
IUUC-Tme-126883	Tuber melanosporum	45.28	2.00e-87	313.00
IUUC-Tbe-127310	Tupaia belangeri	50.00	7.00e-14	69.30
IUUC-Ttr-128307	Tursiops truncatus	36.30	1.00e-44	171.00
IUUC-Uma-129579	Ustilago maydis	37.47	2.00e-59	221.00
IUUC-Vda-129826	Verticillium dahliae	74.87	1.00e-175	607.00
IUUC-Vpa-130091	Vicugna pacos	36.30	1.00e-44	171.00
IUUC-Vvi-131040	Vitis vinifera	32.72	1.00e-38	152.00
IUUC-Xtr-132660	Xenopus tropicalis	33.63	1.00e-46	179.00
IUUC-Xma-133496	Xiphophorus maculatus	34.47	2.00e-50	190.00
IUUC-Yli-134509	Yarrowia lipolytica	41.34	5.00e-62	229.00
IUUC-Zma-134685	Zea mays	31.10	1.00e-35	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence