iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040095

Ensembl Protein ID

GGTG_09252T0

UniProt Accession

J3P6W0; J3P6W0_GAGT3

Genbank Protein ID

EJT72386.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

ADBI01000758

Gene Name

GGTG_09252

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_09252	GGTG_09252T0	GGTG_09252T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-58	190.4	188	224
UBD/Beta-Prp	1.00e-72	244.4	407	521

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt++v ++++ +d  +l++++ D+t+++WD+ tg++
   Q: 188  GHTGWVLAVSWsPDgQRLATCGMDKTVRLWDPETGKQ 224
           8***********999*****************99986 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           gh+k +++ v+fspd+sl+a++++d+ +k+w++++gk++ +l  h a+v+++ fs d+ +lvt+s+D t+kvw+++tgk+   l ghed+v+ +++s
   Q: 407  GHQK-QVNHVTFSPDGSLIASAGWDNHTKLWNARDGKFITTLRAHVAPVYQCAFSADSRLLVTASKDTTLKVWNVRTGKMATDLPGHEDEVYGVDWS 502
           4555.6666**************************************************************************************** PP
   S: 104  psgdklvsGshdrtirvwd 122
           p+g++++sG++d+ +r+w 
   Q: 503  PDGQRVASGGRDKAVRLWR 521
           ******************5 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MATVAPPPSK RQRREQVEKT QTQQDVTAAF APPTGSFRAR FVSGADGSPL ADVVEIPFAD 60
ASEKNVSLLL NTLLGRDAEE SVPYRFRILL PDKDLVIDAY PADLQALLRT HGIEDAFETT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCCCTGGC CGAAGAAGCC CTGCCCCTGT GGCCCTGGAG CCCTGGATGA TTTTTCTTGT 60
TCTTTTTCTC TTTTCCTCGA TGTCCCAGCA ACGCAGCTCC TTTCCCCAGC CCTGCGTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	46.03	2.00e-118	417.00
IUUC-Aml-001793	Ailuropoda melanoleuca	46.58	5.00e-122	429.00
IUUC-Atr-002507	Amborella trichopoda	45.23	3.00e-119	420.00
IUUC-Apl-003964	Anas platyrhynchos	48.48	5.00e-122	429.00
IUUC-Aly-006396	Arabidopsis lyrata	44.28	7.00e-121	425.00
IUUC-Ath-007278	Arabidopsis thaliana	44.28	2.00e-120	424.00
IUUC-Ago-007951	Ashbya gossypii	51.22	6.00e-144	502.00
IUUC-Acl-008298	Aspergillus clavatus	60.04	1.00e-170	591.00
IUUC-Afl-008581	Aspergillus flavus	66.67	5.00e-143	498.00
IUUC-Afu-008906	Aspergillus fumigatus	60.92	8.00e-174	601.00
IUUC-Ani-009189	Aspergillus nidulans	58.86	1.00e-169	588.00
IUUC-Ang-009630	Aspergillus niger	60.30	1.00e-177	614.00
IUUC-Aor-010038	Aspergillus oryzae	59.77	0.00e+00	628.00
IUUC-Ate-010278	Aspergillus terreus	59.44	2.00e-174	603.00
IUUC-Ame-011890	Astyanax mexicanus	48.12	2.00e-124	437.00
IUUC-Bgr-012011	Blumeria graminis	60.57	9.00e-180	621.00
IUUC-Bta-012964	Bos taurus	47.39	1.00e-122	431.00
IUUC-Bci-013592	Botrytis cinerea	62.62	6.00e-177	612.00
IUUC-Bdi-015035	Brachypodium distachyon	47.13	9.00e-121	425.00
IUUC-Bol-015501	Brassica oleracea	44.07	1.00e-119	421.00
IUUC-Bra-017642	Brassica rapa	44.49	7.00e-121	425.00
IUUC-Cel-018430	Caenorhabditis elegans	45.04	5.00e-118	416.00
IUUC-Cja-019125	Callithrix jacchus	47.38	7.00e-123	432.00
IUUC-Cfa-021013	Canis familiaris	44.97	8.00e-119	419.00
IUUC-Cpo-021743	Cavia porcellus	47.29	7.00e-123	432.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	39.31	2.00e-93	334.00
IUUC-Csa-024270	Chlorocebus sabaeus	46.79	4.00e-122	429.00
IUUC-Cin-025795	Ciona intestinalis	48.33	3.00e-122	430.00
IUUC-Csv-025953	Ciona savignyi	47.62	9.00e-121	425.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	63.45	5.00e-174	602.00
IUUC-Cne-026901	Cryptococcus neoformans	49.36	2.00e-133	467.00
IUUC-Cme-027281	Cyanidioschyzon merolae	42.60	2.00e-97	348.00
IUUC-Dre-028515	Danio rerio	48.65	2.00e-125	440.00
IUUC-Dno-029596	Dasypus novemcinctus	47.29	2.00e-121	427.00
IUUC-Dor-030494	Dipodomys ordii	45.11	2.00e-120	424.00
IUUC-Dse-031538	Dothistroma septosporum	58.03	3.00e-170	589.00
IUUC-Dme-031974	Drosophila melanogaster	44.44	7.00e-114	402.00
IUUC-Ete-032948	Echinops telfairi	54.50	2.00e-62	231.00
IUUC-Eca-033399	Equus caballus	46.88	3.00e-122	430.00
IUUC-Eeu-035013	Erinaceus europaeus	53.77	4.00e-62	230.00
IUUC-Fca-035860	Felis catus	47.18	1.00e-122	431.00
IUUC-Fal-037069	Ficedula albicollis	52.94	7.00e-75	271.00
IUUC-Fox-038059	Fusarium oxysporum	71.65	0.00e+00	749.00
IUUC-Fso-038445	Fusarium solani	72.22	0.00e+00	756.00
IUUC-Gmo-039319	Gadus morhua	47.38	1.00e-112	398.00
IUUC-Gga-040303	Gallus gallus	53.12	2.00e-75	273.00
IUUC-Gac-042267	Gasterosteus aculeatus	48.34	1.00e-119	421.00
IUUC-Gma-043974	Glycine max	45.83	3.00e-123	433.00
IUUC-Ggo-044637	Gorilla gorilla	46.96	8.00e-122	428.00
IUUC-Hsa-046128	Homo sapiens	47.17	2.00e-122	431.00
IUUC-Hvu-047373	Hordeum vulgare	46.06	3.00e-120	423.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	46.39	1.00e-121	428.00
IUUC-Kpa-049274	Komagataella pastoris	50.28	1.00e-143	501.00
IUUC-Lch-049907	Latimeria chalumnae	44.93	2.00e-114	404.00
IUUC-Lpe-050778	Leersia perrieri	41.50	4.00e-100	356.00
IUUC-Loc-051889	Lepisosteus oculatus	46.46	1.00e-118	418.00
IUUC-Lma-053041	Leptosphaeria maculans	56.97	2.00e-159	554.00
IUUC-Laf-053598	Loxodonta africana	48.23	9.00e-124	435.00
IUUC-Mcc-055660	Macaca mulatta	47.00	4.00e-122	429.00
IUUC-Meu-056197	Macropus eugenii	52.35	4.00e-108	383.00
IUUC-Mor-056949	Magnaporthe oryzae	86.53	0.00e+00	897.00
IUUC-Mpo-057571	Magnaporthe poae	93.98	1.00e-119	421.00
IUUC-Mtr-058530	Medicago truncatula	50.00	2.00e-123	434.00
IUUC-Mla-059133	Melampsora laricipopulina	53.71	4.00e-123	433.00
IUUC-Mga-059252	Meleagris gallopavo	52.69	5.00e-110	389.00
IUUC-Mvi-060522	Microbotryum violaceum	48.21	2.00e-133	467.00
IUUC-Mmr-061117	Microcebus murinus	50.46	2.00e-121	427.00
IUUC-Mdo-062892	Monodelphis domestica	47.08	3.00e-123	433.00
IUUC-Mmu-064108	Mus musculus	50.47	2.00e-120	424.00
IUUC-Mac-064430	Musa acuminata	45.23	5.00e-120	422.00
IUUC-Mpu-065882	Mustela putorius furo	47.08	1.00e-122	431.00
IUUC-Mlu-068123	Myotis lucifugus	47.59	3.00e-123	433.00
IUUC-Nfi-068484	Neosartorya fischeri	60.34	6.00e-173	598.00
IUUC-Ncr-068649	Neurospora crassa	70.50	0.00e+00	767.00
IUUC-Nle-069140	Nomascus leucogenys	46.88	4.00e-122	429.00
IUUC-Opr-070220	Ochotona princeps	52.49	4.00e-108	383.00
IUUC-Ont-072643	Oreochromis niloticus	48.02	8.00e-124	435.00
IUUC-Ocu-074007	Oryctolagus cuniculus	50.12	2.00e-120	424.00
IUUC-Oba-075904	Oryza barthii	48.46	5.00e-119	419.00
IUUC-Obr-076280	Oryza brachyantha	46.42	7.00e-119	419.00
IUUC-Ogl-077425	Oryza glaberrima	46.96	2.00e-119	421.00
IUUC-Ogu-078586	Oryza glumaepatula	46.44	3.00e-120	423.00
IUUC-Oin-079489	Oryza indica	44.86	4.00e-110	389.00
IUUC-Olo-080587	Oryza longistaminata	48.87	3.00e-119	421.00
IUUC-Ome-081905	Oryza meridionalis	48.68	6.00e-119	419.00
IUUC-Oni-083022	Oryza nivara	46.75	5.00e-119	419.00
IUUC-Opu-083615	Oryza punctata	46.96	4.00e-119	419.00
IUUC-Oru-085076	Oryza rufipogon	48.46	7.00e-119	419.00
IUUC-Osa-085516	Oryza sativa	48.46	7.00e-119	419.00
IUUC-Ola-087290	Oryzias latipes	48.55	2.00e-125	441.00
IUUC-Olu-087898	Ostreococcus lucimarinus	51.60	3.00e-113	400.00
IUUC-Oga-088980	Otolemur garnettii	46.67	2.00e-121	427.00
IUUC-Oar-089580	Ovis aries	43.75	7.00e-94	335.00
IUUC-Ptr-090845	Pan troglodytes	46.75	3.00e-121	426.00
IUUC-Pan-092836	Papio anubis	47.08	2.00e-122	431.00
IUUC-Pno-095052	Phaeosphaeria nodorum	57.55	3.00e-171	593.00
IUUC-Ppa-095432	Physcomitrella patens	49.46	2.00e-124	437.00
IUUC-Pfo-096963	Poecilia formosa	43.04	8.00e-102	362.00
IUUC-Pab-097716	Pongo abelii	44.58	5.00e-113	399.00
IUUC-Pop-099224	Populus trichocarpa	46.53	1.00e-124	438.00
IUUC-Pca-100682	Procavia capensis	52.35	2.00e-106	377.00
IUUC-Ppe-101819	Prunus persica	45.81	9.00e-124	435.00
IUUC-Pva-102338	Pteropus vampyrus	41.76	2.00e-74	271.00
IUUC-Pgr-103583	Puccinia graminis	54.07	9.00e-128	448.00
IUUC-Ptt-103737	Puccinia triticina	45.22	1.00e-97	348.00
IUUC-Pte-104150	Pyrenophora teres	57.93	3.00e-168	583.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	58.13	1.00e-168	584.00
IUUC-Rno-105987	Rattus norvegicus	47.18	6.00e-123	432.00
IUUC-Sce-106315	Saccharomyces cerevisiae	51.05	1.00e-146	511.00
IUUC-Sha-107273	Sarcophilus harrisii	46.88	2.00e-123	434.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	46.85	5.00e-125	439.00
IUUC-Spo-108092	Schizosaccharomyces pombe	48.56	4.00e-130	456.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	57.83	2.00e-162	563.00
IUUC-Smo-108976	Selaginella moellendorffii	47.48	2.00e-122	431.00
IUUC-Sit-110329	Setaria italica	46.41	1.00e-118	419.00
IUUC-Sly-111830	Solanum lycopersicum	47.58	2.00e-123	434.00
IUUC-Stu-112603	Solanum tuberosum	47.58	2.00e-123	434.00
IUUC-Sbi-114560	Sorghum bicolor	45.89	9.00e-121	425.00
IUUC-Sre-115133	Sporisorium reilianum	40.94	5.00e-116	409.00
IUUC-Ssc-115903	Sus scrofa	47.30	1.00e-123	434.00
IUUC-Tgu-116798	Taeniopygia guttata	47.50	4.00e-122	429.00
IUUC-Tru-118361	Takifugu rubripes	48.86	9.00e-126	441.00
IUUC-Tsy-118849	Tarsius syrichta	47.17	2.00e-121	427.00
IUUC-Tni-120094	Tetraodon nigroviridis	48.44	5.00e-123	432.00
IUUC-Tca-121634	Theobroma cacao	45.90	7.00e-120	422.00
IUUC-Tre-122051	Trichoderma reesei	70.75	0.00e+00	721.00
IUUC-Tvi-122322	Trichoderma virens	71.51	0.00e+00	753.00
IUUC-Tae-125822	Triticum aestivum	46.03	2.00e-118	417.00
IUUC-Tur-126766	Triticum urartu	45.44	3.00e-113	400.00
IUUC-Tme-127175	Tuber melanosporum	56.46	8.00e-162	561.00
IUUC-Tbe-127779	Tupaia belangeri	48.76	6.00e-117	412.00
IUUC-Ttr-128224	Tursiops truncatus	48.31	2.00e-117	414.00
IUUC-Uma-129537	Ustilago maydis	40.66	3.00e-117	414.00
IUUC-Vda-129927	Verticillium dahliae	65.33	0.00e+00	704.00
IUUC-Vpa-130658	Vicugna pacos	42.48	1.00e-55	209.00
IUUC-Vvi-131659	Vitis vinifera	47.37	6.00e-124	436.00
IUUC-Xtr-132918	Xenopus tropicalis	43.98	3.00e-111	394.00
IUUC-Xma-133700	Xiphophorus maculatus	48.02	8.00e-124	435.00
IUUC-Yli-134478	Yarrowia lipolytica	50.67	7.00e-150	522.00
IUUC-Zma-135835	Zea mays	44.73	2.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence