iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017798

Ensembl Protein ID

Bra008598.1-P

UniProt Accession

M4CWK1; M4CWK1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra008598	Bra008598.1	Bra008598.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-60	199.8	142	175
UBD/Beta-Prp	2.20e-114	382.7	413	668

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDl 30
           gH++ v+++ f    d ++l+sGsdD t++vWDl
   Q: 142  GHKGVVSSILFhpdADkNILISGSDDATVRVWDL 175
           8********9**6644799**************8 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfsp 104
            ++ l++tgs+d+t+++w++t+++++    gh++ + av f +++  ++v+gs Drt+kvw+l+          + k+ +++ +h++++ s+++ +
   Q: 413  SGNVLIVTGSKDKTVRLWNATSQSCIGVGTGHNGDILAVAFAKKSFsFFVSGSGDRTLKVWSLDgisedsedpiNLKTRSVVAAHDKDINSVAVAR 508
           4566889**********************************887645**************6666666666666********************** PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsl 200
           +++ + +Gs+drt+ +w l+    +  tl+gh++ + +v+++p +++++++s D+tv++W ++ g++l+t++g ht+sv   sf  +g+++vs++ 
   Q: 509  NDSLVCTGSEDRTASIWRLPDLVHVV-TLKGHKRRIFSVEFSPVDQCVMTASGDKTVKIWAISDGSCLKTFEG-HTSSVLRASFITDGTQFVSCGA 602
           **************************.********************************************99.********************** PP
   S: 201  dgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhns 265
           dg +klw++ t+ec+ t+  h+d v+ +++ +++e +++g+ D +i++W d++ +d    + ++++
   Q: 603  DGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMVATGGGDAVINLWhDSTASDKEDEFRKEEE 668
           *************************************************99999888888877665 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAPQSLKKNY KCSRSLKQFY SGGPFIVSSD GSFIACACGE AINIVDALDS SVKSTIEGES 60
DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRTWKG HEGPVMGMAV HASGGLLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCTC AGTCGTTGAA GAAGAACTAC AAGTGCTCTC GTTCTCTAAA GCAGTTCTAC 60
AGCGGCGGTC CTTTCATCGT TTCGTCTGAC GGTTCTTTTA TCGCCTGCGC TTGTGGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002376	Ailuropoda melanoleuca	35.48	6.00e-148	517.00
IUUC-Atr-002486	Amborella trichopoda	62.37	0.00e+00	1090.00
IUUC-Aly-006152	Arabidopsis lyrata	92.58	0.00e+00	1518.00
IUUC-Ath-006966	Arabidopsis thaliana	91.29	0.00e+00	1508.00
IUUC-Ago-007746	Ashbya gossypii	29.57	3.00e-97	349.00
IUUC-Acl-008009	Aspergillus clavatus	27.74	2.00e-95	343.00
IUUC-Afl-008681	Aspergillus flavus	27.61	3.00e-87	316.00
IUUC-Afu-008798	Aspergillus fumigatus	27.37	1.00e-88	321.00
IUUC-Ani-009278	Aspergillus nidulans	27.92	5.00e-101	362.00
IUUC-Ang-009640	Aspergillus niger	28.91	5.00e-102	365.00
IUUC-Aor-010160	Aspergillus oryzae	27.61	4.00e-87	315.00
IUUC-Ate-010320	Aspergillus terreus	28.13	1.00e-96	347.00
IUUC-Ame-010930	Astyanax mexicanus	38.12	2.00e-38	151.00
IUUC-Bgr-012054	Blumeria graminis	29.19	3.00e-97	349.00
IUUC-Bta-012611	Bos taurus	36.29	6.00e-143	501.00
IUUC-Bci-013797	Botrytis cinerea	29.09	8.00e-99	354.00
IUUC-Bdi-014384	Brachypodium distachyon	62.08	0.00e+00	1086.00
IUUC-Bol-015097	Brassica oleracea	98.82	0.00e+00	1628.00
IUUC-Cja-019092	Callithrix jacchus	35.75	6.00e-148	517.00
IUUC-Cfa-021040	Canis familiaris	35.99	4.00e-150	525.00
IUUC-Cpo-022529	Cavia porcellus	36.20	3.00e-141	495.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	62.77	7.00e-52	195.00
IUUC-Csa-024205	Chlorocebus sabaeus	35.71	3.00e-148	518.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.99	4.00e-105	375.00
IUUC-Cne-027082	Cryptococcus neoformans	29.78	2.00e-113	403.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.18	6.00e-38	152.00
IUUC-Dno-029914	Dasypus novemcinctus	34.62	2.00e-100	360.00
IUUC-Dor-030685	Dipodomys ordii	37.30	5.00e-92	332.00
IUUC-Dse-031429	Dothistroma septosporum	28.04	1.00e-99	357.00
IUUC-Dme-031995	Drosophila melanogaster	29.37	3.00e-91	329.00
IUUC-Ete-033086	Echinops telfairi	38.34	1.00e-88	321.00
IUUC-Eca-034354	Equus caballus	36.45	2.00e-142	499.00
IUUC-Eeu-034832	Erinaceus europaeus	37.93	1.00e-85	310.00
IUUC-Fca-036136	Felis catus	33.17	3.00e-122	432.00
IUUC-Fox-037863	Fusarium oxysporum	28.90	1.00e-94	340.00
IUUC-Fso-038389	Fusarium solani	27.84	3.00e-101	362.00
IUUC-Ggr-039820	Gaeumannomyces graminis	27.23	5.00e-94	338.00
IUUC-Gma-044026	Glycine max	68.82	0.00e+00	1191.00
IUUC-Ggo-044693	Gorilla gorilla	35.89	8.00e-147	514.00
IUUC-Hsa-046048	Homo sapiens	35.64	2.00e-146	513.00
IUUC-Hvu-047608	Hordeum vulgare	62.36	0.00e+00	1062.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	36.03	3.00e-155	542.00
IUUC-Kpa-049209	Komagataella pastoris	31.64	4.00e-111	395.00
IUUC-Lch-050085	Latimeria chalumnae	35.88	5.00e-144	504.00
IUUC-Lpe-050945	Leersia perrieri	59.65	0.00e+00	1023.00
IUUC-Laf-053685	Loxodonta africana	35.59	3.00e-136	478.00
IUUC-Mcc-055861	Macaca mulatta	35.61	3.00e-146	511.00
IUUC-Meu-056820	Macropus eugenii	34.29	1.00e-109	390.00
IUUC-Mor-057234	Magnaporthe oryzae	27.40	7.00e-87	315.00
IUUC-Mpo-057456	Magnaporthe poae	27.97	6.00e-70	258.00
IUUC-Mtr-058122	Medicago truncatula	67.14	0.00e+00	1188.00
IUUC-Mla-058980	Melampsora laricipopulina	26.55	4.00e-72	266.00
IUUC-Mmr-060762	Microcebus murinus	36.49	8.00e-146	511.00
IUUC-Mdo-061975	Monodelphis domestica	38.07	1.00e-149	523.00
IUUC-Mmu-064038	Mus musculus	35.95	6.00e-145	508.00
IUUC-Mac-065189	Musa acuminata	61.77	0.00e+00	1093.00
IUUC-Mpu-066526	Mustela putorius furo	36.16	1.00e-142	500.00
IUUC-Mlu-067716	Myotis lucifugus	35.58	2.00e-157	549.00
IUUC-Nfi-068474	Neosartorya fischeri	27.54	3.00e-93	336.00
IUUC-Ncr-068826	Neurospora crassa	26.39	3.00e-91	329.00
IUUC-Nle-069832	Nomascus leucogenys	36.00	8.00e-149	520.00
IUUC-Opr-071183	Ochotona princeps	35.61	2.00e-141	496.00
IUUC-Ont-072371	Oreochromis niloticus	35.73	2.00e-158	552.00
IUUC-Oba-075963	Oryza barthii	61.08	0.00e+00	1053.00
IUUC-Obr-076173	Oryza brachyantha	61.84	0.00e+00	1036.00
IUUC-Ogl-077692	Oryza glaberrima	61.20	0.00e+00	1050.00
IUUC-Ogu-078965	Oryza glumaepatula	61.08	0.00e+00	1052.00
IUUC-Oin-079708	Oryza indica	60.72	0.00e+00	1048.00
IUUC-Olo-080679	Oryza longistaminata	60.60	0.00e+00	1051.00
IUUC-Oni-082960	Oryza nivara	60.60	0.00e+00	1046.00
IUUC-Opu-083282	Oryza punctata	60.97	0.00e+00	1014.00
IUUC-Oru-085224	Oryza rufipogon	60.96	0.00e+00	1051.00
IUUC-Osa-085320	Oryza sativa	60.96	0.00e+00	1051.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.22	1.00e-129	457.00
IUUC-Oga-088458	Otolemur garnettii	35.40	2.00e-153	535.00
IUUC-Oar-090032	Ovis aries	34.93	3.00e-104	372.00
IUUC-Ptr-090749	Pan troglodytes	35.52	1.00e-145	510.00
IUUC-Pan-091691	Papio anubis	34.49	9.00e-137	480.00
IUUC-Pma-094165	Petromyzon marinus	33.68	2.00e-104	373.00
IUUC-Pno-095048	Phaeosphaeria nodorum	29.62	2.00e-79	290.00
IUUC-Ppa-095336	Physcomitrella patens	53.38	0.00e+00	887.00
IUUC-Pab-097855	Pongo abelii	36.02	2.00e-149	522.00
IUUC-Pop-099434	Populus trichocarpa	67.47	0.00e+00	1166.00
IUUC-Pca-100232	Procavia capensis	32.73	7.00e-49	188.00
IUUC-Ppe-101665	Prunus persica	70.91	0.00e+00	1199.00
IUUC-Pva-102178	Pteropus vampyrus	36.31	3.00e-149	522.00
IUUC-Pgr-103288	Puccinia graminis	26.79	4.00e-74	272.00
IUUC-Ptt-103808	Puccinia triticina	28.31	1.00e-69	258.00
IUUC-Pte-104205	Pyrenophora teres	30.38	6.00e-101	361.00
IUUC-Rno-105617	Rattus norvegicus	36.45	2.00e-145	509.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.47	1.00e-101	364.00
IUUC-Sha-107378	Sarcophilus harrisii	37.79	4.00e-149	521.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	32.28	3.00e-116	412.00
IUUC-Spo-108361	Schizosaccharomyces pombe	30.55	3.00e-110	392.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	29.82	1.00e-106	380.00
IUUC-Smo-109257	Selaginella moellendorffii	50.18	0.00e+00	867.00
IUUC-Sit-110258	Setaria italica	61.58	0.00e+00	1080.00
IUUC-Sly-111521	Solanum lycopersicum	68.02	0.00e+00	1145.00
IUUC-Sbi-114768	Sorghum bicolor	60.43	0.00e+00	1068.00
IUUC-Sre-115159	Sporisorium reilianum	33.08	7.00e-93	335.00
IUUC-Ssc-116342	Sus scrofa	27.47	2.00e-64	240.00
IUUC-Tca-121248	Theobroma cacao	72.15	0.00e+00	1207.00
IUUC-Tre-122079	Trichoderma reesei	28.51	8.00e-105	374.00
IUUC-Tvi-122554	Trichoderma virens	29.56	9.00e-107	381.00
IUUC-Tae-123690	Triticum aestivum	61.22	0.00e+00	1078.00
IUUC-Ttr-128964	Tursiops truncatus	35.38	5.00e-144	504.00
IUUC-Uma-129473	Ustilago maydis	30.25	1.00e-96	348.00
IUUC-Vda-129749	Verticillium dahliae	29.28	2.00e-91	330.00
IUUC-Vvi-131511	Vitis vinifera	70.85	0.00e+00	1193.00
IUUC-Xtr-132816	Xenopus tropicalis	34.34	1.00e-130	460.00
IUUC-Yli-134602	Yarrowia lipolytica	34.36	3.00e-133	468.00
IUUC-Zma-135559	Zea mays	58.62	0.00e+00	1035.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence