iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+  +d  +vlp C+H+fh +C+  w       + + +CP+Cr
   Q: 129  CSICLADYkkMDMIRVLPdCNHLFHDNCVDPW------LRLHPTCPVCR 171
           ********76555899999*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MNATVVPPYS GHWLTNTDRM GGLAYGIGVS IGILMLITTI TLTSYYCTRS HISASPTTTP 60
RTRRRQRESN GTLPPGQERF DFEDDESDTV VVEVLGLTEE VIKGFPKLPY EEARVSYSLQ 120

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Nucleotide Sequence
(Fasta)

ATTTCATTCA AGCATTCAAC ATGCCATGAT TTATTGTAAT ACGTAGATAT ATAATTAATA 60
AAAAAAACAT TGAAAAACAA TGGGTTACAG TGGATTAATA TTTTACTAAA ATCTATGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G06490

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002979	Amborella trichopoda	56.96	4.00e-24	102.00
IUUC-Aly-006506	Arabidopsis lyrata	94.42	2.00e-93	334.00
IUUC-Bdi-014078	Brachypodium distachyon	56.70	6.00e-23	99.80
IUUC-Bol-015155	Brassica oleracea	76.41	4.00e-71	259.00
IUUC-Bra-017974	Brassica rapa	77.95	5.00e-73	266.00
IUUC-Ete-032463	Echinops telfairi	49.12	3.00e-13	68.90
IUUC-Lpe-051365	Leersia perrieri	55.00	2.00e-20	91.70
IUUC-Mdo-062435	Monodelphis domestica	47.46	2.00e-13	68.90
IUUC-Mpu-066007	Mustela putorius furo	47.46	3.00e-13	68.90
IUUC-Opr-070435	Ochotona princeps	48.98	2.00e-11	61.60
IUUC-Ogu-078903	Oryza glumaepatula	51.58	8.00e-19	85.90
IUUC-Sit-110656	Setaria italica	41.83	4.00e-24	103.00
IUUC-Sar-113043	Sorex araneus	49.12	3.00e-13	68.60
IUUC-Tca-121049	Theobroma cacao	66.04	3.00e-31	127.00
IUUC-Tae-125155	Triticum aestivum	38.04	7.00e-23	99.40
IUUC-Tur-125993	Triticum urartu	39.01	4.00e-23	101.00
IUUC-Ttr-128435	Tursiops truncatus	49.12	3.00e-13	68.90
IUUC-Xtr-132504	Xenopus tropicalis	49.12	7.00e-13	67.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence