iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-010644

Ensembl Protein ID

ENSAMXP00000025728.1

UniProt Accession

W5LS35; W5LS35_ASTMX

Genbank Protein ID

ENSAMXP00000025728

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01079936

Gene Name

RNF223 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000025022.1	ENSAMXT00000025748.1	ENSAMXP00000025728.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-08	34.2	27	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkw.pglknssskefrCPlCr 46
           C+iC++ +++ ++ +p    C H+f+++Cl ++   +++ + ++++CP Cr
   Q: 27   CSICFNTYDN-VFKTPkqldCTHTFCLECLSRLmAISMDPQETKISCPFCR 76
           ********77.666555555**********8888899999**********8 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MDSGPTVWHT QVAPLEMDVE KGPELQCSIC FNTYDNVFKT PKQLDCTHTF CLECLSRLMA 60
ISMDPQETKI SCPFCRRPTP IPKNGPPALT TSQEVLCRLP SHQQHEEPVW LDGEKLCYKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACTCTG GCCCGACGGT GTGGCACACC CAGGTGGCTC CTCTGGAGAT GGACGTGGAG 60
AAGGGCCCTG AGCTGCAGTG CTCCATTTGC TTCAACACTT ACGACAATGT CTTCAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005120	Anolis carolinensis	46.24	3.00e-25	108.00
IUUC-Ang-009644	Aspergillus niger	31.76	6.00e-05	42.40
IUUC-Bta-013148	Bos taurus	40.87	5.00e-32	130.00
IUUC-Cfa-020556	Canis familiaris	52.14	9.00e-30	123.00
IUUC-Cpo-022176	Cavia porcellus	46.77	4.00e-31	128.00
IUUC-Csa-023157	Chlorocebus sabaeus	44.51	3.00e-31	128.00
IUUC-Dre-028766	Danio rerio	72.22	2.00e-74	271.00
IUUC-Eca-034096	Equus caballus	45.11	3.00e-28	118.00
IUUC-Fca-036424	Felis catus	61.11	2.00e-15	73.60
IUUC-Ggo-045542	Gorilla gorilla	59.32	2.00e-16	78.60
IUUC-Hsa-046205	Homo sapiens	45.25	1.00e-31	129.00
IUUC-Lch-049896	Latimeria chalumnae	50.00	4.00e-44	170.00
IUUC-Loc-052136	Lepisosteus oculatus	45.45	1.00e-16	79.70
IUUC-Laf-054336	Loxodonta africana	51.72	7.00e-30	124.00
IUUC-Mcc-055051	Macaca mulatta	45.73	3.00e-31	128.00
IUUC-Mmu-063376	Mus musculus	43.75	1.00e-35	142.00
IUUC-Mpu-066249	Mustela putorius furo	47.79	3.00e-30	125.00
IUUC-Ont-071891	Oreochromis niloticus	52.48	2.00e-50	191.00
IUUC-Oga-088065	Otolemur garnettii	43.53	8.00e-35	140.00
IUUC-Pan-091816	Papio anubis	45.81	3.00e-31	128.00
IUUC-Psi-093845	Pelodiscus sinensis	44.56	3.00e-34	138.00
IUUC-Pfo-097099	Poecilia formosa	56.16	5.00e-58	217.00
IUUC-Tni-119763	Tetraodon nigroviridis	69.05	4.00e-29	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence