iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017880

Ensembl Protein ID

Bra038515.1-P

UniProt Accession

M4FBP9; M4FBP9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038515	Bra038515.1	Bra038515.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-10	41.2	140	180
E3 activity/RING/U-box	3.50e-09	37.6	137	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ +++ p+++pCgH f+++C+qkw       +++ +C +Cr
   Q: 140  CSICLQLPER-PVTTPCGHNFCLKCFQKW----VAGKRKPTCGTCR 180
           **********.9*****************....78889999****8 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplt 51
              C+I l+l++ Pv++p+G+ +  ++ +kw+a ++k tc ++r+++ 
   Q: 137  NVSCSICLQLPERPVTTPCGHNFCLKCFQKWVAGKRKpTCGTCRASIP 184
           678*****************************9999999999998874 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDRCGEIQLP CDADDVCMRC KSKIPSEECL TCSTCVTPWH VSCLRSPPAT LASTQSWECP 60
DCSGDVDPAP ASGLNPNSSS LVAAIRAIEA DASLNEAQKA KKRQQLVSGK AVEEEDEEKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCGTT GTGGTGAAAT TCAACTCCCT TGCGACGCCG ATGACGTATG CATGCGATGC 60
AAATCCAAAA TCCCGTCGGA AGAGTGCCTC ACGTGCAGCA CGTGCGTCAC CCCTTGGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005287	Anolis carolinensis	35.09	4.00e-47	182.00
IUUC-Bci-013692	Botrytis cinerea	48.21	3.00e-09	57.00
IUUC-Bol-016567	Brassica oleracea	95.33	0.00e+00	1145.00
IUUC-Cre-022645	Chlamydomonas reinhardtii	35.67	7.00e-79	288.00
IUUC-Cho-024857	Choloepus hoffmanni	43.20	4.00e-21	96.30
IUUC-Dme-031618	Drosophila melanogaster	42.86	7.00e-07	48.10
IUUC-Mmu-063738	Mus musculus	36.32	1.00e-47	184.00
IUUC-Pno-095043	Phaeosphaeria nodorum	48.00	1.00e-08	53.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence