iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005898

UUCD1 version

UUC-ArL-00750

Ensembl Protein ID

fgenesh2_kg.6__436__AT5G05130.1

UniProt Accession

D7LYB0; D7LYB0_ARALL

Genbank Protein ID

EFH47398.1

Protein Name

SNF2 domain-containing protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_487302

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__436__AT5G05130.1	fgenesh2_kg.6__436__AT5G05130.1	fgenesh2_kg.6__436__AT5G05130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-06	27.7	615	654

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iC +++ +  ++++C H+f++ C+ q +      ++ + +CPlCr
   Q: 615  CPICISPPTN-IIITRCAHIFCRACIlQTL------QRSKPLCPLCR 654
           ********99.**************97777......999999****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAQFLRHFSS PPMANEDEFQ SPVEPSQQSQ DCVSESYLIG FVIANIVGLK YYSGRINGRE 60
MVGLVREPLN PYDNNAIRVL NTRSEQVGHI ERTVAAVLAP LIDSHTIIVE GIVPNTRSNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTTCGAGC TCCTTCTTCT CTCCGTCATC GTTCCTCTCC CATCCCATGG CACAGTTTCT 60
TCGACACTTC TCTTCCCCTC CCATGGCGAA CGAAGACGAA TTTCAATCTC CGGTAGAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_487302

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000819	Aegilops tauschii	51.18	9.00e-129	453.00
IUUC-Aml-001237	Ailuropoda melanoleuca	42.59	3.00e-112	399.00
IUUC-Aca-004994	Anolis carolinensis	42.99	7.00e-118	417.00
IUUC-Ath-007559	Arabidopsis thaliana	95.36	0.00e+00	1592.00
IUUC-Acl-008053	Aspergillus clavatus	30.69	2.00e-105	376.00
IUUC-Afl-008697	Aspergillus flavus	32.90	1.00e-93	337.00
IUUC-Afu-008767	Aspergillus fumigatus	33.23	4.00e-96	345.00
IUUC-Ani-009435	Aspergillus nidulans	36.40	9.00e-86	311.00
IUUC-Ang-009635	Aspergillus niger	34.42	2.00e-97	349.00
IUUC-Aor-010130	Aspergillus oryzae	33.63	3.00e-96	345.00
IUUC-Ame-011743	Astyanax mexicanus	38.39	1.00e-105	377.00
IUUC-Bta-013391	Bos taurus	40.37	6.00e-120	424.00
IUUC-Bci-013956	Botrytis cinerea	30.07	3.00e-97	349.00
IUUC-Bdi-014267	Brachypodium distachyon	53.40	0.00e+00	865.00
IUUC-Bol-016075	Brassica oleracea	82.95	0.00e+00	1394.00
IUUC-Bra-017057	Brassica rapa	83.35	0.00e+00	1364.00
IUUC-Cja-019685	Callithrix jacchus	42.25	3.00e-117	416.00
IUUC-Cfa-020485	Canis familiaris	42.59	3.00e-112	399.00
IUUC-Cpo-021361	Cavia porcellus	42.05	1.00e-115	410.00
IUUC-Csa-023894	Chlorocebus sabaeus	42.25	1.00e-117	416.00
IUUC-Cho-024891	Choloepus hoffmanni	39.84	3.00e-76	279.00
IUUC-Cne-026829	Cryptococcus neoformans	30.98	1.00e-107	383.00
IUUC-Dre-027867	Danio rerio	40.37	4.00e-120	425.00
IUUC-Dno-029517	Dasypus novemcinctus	42.22	3.00e-114	405.00
IUUC-Ete-032421	Echinops telfairi	36.01	9.00e-86	311.00
IUUC-Eca-034058	Equus caballus	42.41	4.00e-109	389.00
IUUC-Fca-035390	Felis catus	42.59	4.00e-112	398.00
IUUC-Gmo-038544	Gadus morhua	41.62	4.00e-120	425.00
IUUC-Gac-042401	Gasterosteus aculeatus	39.89	1.00e-118	420.00
IUUC-Ggo-045628	Gorilla gorilla	42.07	2.00e-117	416.00
IUUC-Hsa-045930	Homo sapiens	42.07	2.00e-117	416.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	42.73	5.00e-118	418.00
IUUC-Lch-050617	Latimeria chalumnae	41.80	8.00e-122	431.00
IUUC-Lpe-051724	Leersia perrieri	52.01	0.00e+00	815.00
IUUC-Loc-052785	Lepisosteus oculatus	40.78	9.00e-122	431.00
IUUC-Laf-054309	Loxodonta africana	40.67	4.00e-115	408.00
IUUC-Mcc-055493	Macaca mulatta	41.15	3.00e-117	415.00
IUUC-Meu-056270	Macropus eugenii	40.04	2.00e-102	366.00
IUUC-Mtr-058172	Medicago truncatula	58.07	0.00e+00	956.00
IUUC-Mvi-060365	Microbotryum violaceum	33.05	6.00e-82	298.00
IUUC-Mmr-061043	Microcebus murinus	42.25	4.00e-111	395.00
IUUC-Mdo-062919	Monodelphis domestica	42.62	1.00e-109	390.00
IUUC-Mmu-064338	Mus musculus	42.41	6.00e-121	428.00
IUUC-Mpu-066781	Mustela putorius furo	42.59	2.00e-112	399.00
IUUC-Mlu-068076	Myotis lucifugus	39.87	8.00e-116	410.00
IUUC-Nfi-068386	Neosartorya fischeri	33.63	2.00e-96	346.00
IUUC-Ncr-068858	Neurospora crassa	31.08	5.00e-112	398.00
IUUC-Nle-069947	Nomascus leucogenys	41.67	7.00e-118	417.00
IUUC-Opr-070388	Ochotona princeps	45.05	4.00e-59	223.00
IUUC-Ont-071782	Oreochromis niloticus	41.11	1.00e-115	410.00
IUUC-Oan-073331	Ornithorhynchus anatinus	42.75	5.00e-113	401.00
IUUC-Ocu-074705	Oryctolagus cuniculus	43.25	4.00e-120	425.00
IUUC-Oba-075881	Oryza barthii	53.21	0.00e+00	837.00
IUUC-Obr-076344	Oryza brachyantha	54.96	0.00e+00	689.00
IUUC-Ogl-076957	Oryza glaberrima	53.21	0.00e+00	837.00
IUUC-Ogu-078648	Oryza glumaepatula	59.93	2.00e-178	618.00
IUUC-Oin-079449	Oryza indica	53.33	0.00e+00	818.00
IUUC-Olo-080721	Oryza longistaminata	56.38	0.00e+00	706.00
IUUC-Ome-081579	Oryza meridionalis	52.77	0.00e+00	819.00
IUUC-Oni-083054	Oryza nivara	53.33	0.00e+00	818.00
IUUC-Opu-083706	Oryza punctata	53.72	0.00e+00	845.00
IUUC-Oru-085259	Oryza rufipogon	53.33	0.00e+00	817.00
IUUC-Osa-085568	Oryza sativa	53.14	0.00e+00	773.00
IUUC-Ola-086830	Oryzias latipes	39.59	8.00e-108	384.00
IUUC-Oga-088120	Otolemur garnettii	42.99	8.00e-107	381.00
IUUC-Oar-089293	Ovis aries	42.59	1.00e-119	424.00
IUUC-Ptr-091418	Pan troglodytes	42.07	3.00e-117	416.00
IUUC-Pan-092579	Papio anubis	39.35	2.00e-61	230.00
IUUC-Psi-093626	Pelodiscus sinensis	42.86	9.00e-118	417.00
IUUC-Pno-094841	Phaeosphaeria nodorum	35.95	8.00e-91	328.00
IUUC-Ppa-095291	Physcomitrella patens	46.27	0.00e+00	729.00
IUUC-Pfo-096540	Poecilia formosa	41.22	7.00e-119	421.00
IUUC-Pab-098010	Pongo abelii	41.08	4.00e-117	415.00
IUUC-Pop-099141	Populus trichocarpa	46.72	0.00e+00	635.00
IUUC-Pca-100648	Procavia capensis	40.22	3.00e-115	409.00
IUUC-Ppe-102077	Prunus persica	57.69	0.00e+00	892.00
IUUC-Pva-102896	Pteropus vampyrus	43.93	3.00e-99	355.00
IUUC-Rno-106130	Rattus norvegicus	42.43	3.00e-122	432.00
IUUC-Sha-107221	Sarcophilus harrisii	42.80	7.00e-110	391.00
IUUC-Ssl-108383	Sclerotinia sclerotiorum	29.32	5.00e-96	345.00
IUUC-Smo-109465	Selaginella moellendorffii	44.43	0.00e+00	704.00
IUUC-Sit-109770	Setaria italica	54.23	0.00e+00	857.00
IUUC-Sar-113719	Sorex araneus	41.58	2.00e-124	439.00
IUUC-Ssc-116186	Sus scrofa	42.41	4.00e-119	422.00
IUUC-Tsy-118957	Tarsius syrichta	42.80	4.00e-113	402.00
IUUC-Tni-120618	Tetraodon nigroviridis	40.81	1.00e-118	420.00
IUUC-Tvi-122492	Trichoderma virens	32.09	1.00e-108	386.00
IUUC-Tae-125897	Triticum aestivum	53.68	0.00e+00	834.00
IUUC-Tur-125973	Triticum urartu	50.85	7.00e-130	457.00
IUUC-Ttr-128243	Tursiops truncatus	40.11	2.00e-60	226.00
IUUC-Vda-129933	Verticillium dahliae	31.55	1.00e-79	290.00
IUUC-Vpa-130672	Vicugna pacos	41.93	2.00e-116	413.00
IUUC-Vvi-131204	Vitis vinifera	64.51	0.00e+00	1129.00
IUUC-Xtr-132730	Xenopus tropicalis	44.34	5.00e-125	441.00
IUUC-Xma-133384	Xiphophorus maculatus	41.93	2.00e-122	433.00
IUUC-Zma-134966	Zea mays	54.72	0.00e+00	870.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence