iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000008305.18	ENSMUST00000072695.12	ENSMUSP00000072481.6
ENSMUSG00000008305.18	ENSMUST00000107337.7	ENSMUSP00000102960.1
ENSMUSG00000008305.18	ENSMUST00000140154.1	ENSMUSP00000118513.1
ENSMUSG00000008305.18	ENSMUST00000102848.8	ENSMUSP00000099912.2
ENSMUSG00000008305.18	ENSMUST00000137075.1	ENSMUSP00000118683.1
ENSMUSG00000008305.18	ENSMUST00000030095.10	ENSMUSP00000030095.4
ENSMUSG00000008305.18	ENSMUST00000074216.13	ENSMUSP00000073839.7

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RepTar
miRNAMap	RAID2
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-21	75.9	624	662

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtd+ +c++  +d t l++G+ D+t++ WDlr+g++l+
   Q: 624  GHTDGASCIDIsNDgTKLWTGGLDNTVRSWDLREGRQLQ 662
           8***********999*********************998 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MFPQSRHPTP HQAAGQPFKF TIPESLDRIK EEFQFLQAQY HSLKLECEKL ASEKTEMQRH 60
YVMYYEMSYG LNIEMHKQTE IAKRLNTICA QVIPFLSQEH QQQVAQAVER AKQVTMAELN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGCAGCCCC CGCCACACGG CTCGGGCGGG GTGCTGGTTT GCTAGCGAGT GTGAAACCGC 60
GTGTTAATGT AAGCGGCGCA AGAGGCGCGG GCGGCGGCAG GAGCAGCGGC GGGGACCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001746	Ailuropoda melanoleuca	92.48	0.00e+00	1243.00
IUUC-Apl-003594	Anas platyrhynchos	92.19	0.00e+00	1224.00
IUUC-Aca-005053	Anolis carolinensis	95.01	0.00e+00	1269.00
IUUC-Bta-013380	Bos taurus	87.36	0.00e+00	1129.00
IUUC-Cja-019135	Callithrix jacchus	95.78	0.00e+00	1283.00
IUUC-Cfa-020611	Canis familiaris	95.45	0.00e+00	1164.00
IUUC-Cpo-022495	Cavia porcellus	95.78	0.00e+00	1283.00
IUUC-Csa-024056	Chlorocebus sabaeus	95.65	0.00e+00	1291.00
IUUC-Cin-025767	Ciona intestinalis	58.00	2.00e-169	589.00
IUUC-Dno-029011	Dasypus novemcinctus	95.15	0.00e+00	1277.00
IUUC-Ete-032533	Echinops telfairi	84.40	0.00e+00	1167.00
IUUC-Eca-033351	Equus caballus	96.04	0.00e+00	1286.00
IUUC-Eeu-034666	Erinaceus europaeus	96.55	0.00e+00	1057.00
IUUC-Fal-036696	Ficedula albicollis	94.21	0.00e+00	1223.00
IUUC-Gmo-038805	Gadus morhua	82.95	0.00e+00	1179.00
IUUC-Gga-041113	Gallus gallus	94.76	0.00e+00	1328.00
IUUC-Gac-041999	Gasterosteus aculeatus	82.81	0.00e+00	1181.00
IUUC-Ggo-045164	Gorilla gorilla	95.78	0.00e+00	1293.00
IUUC-Hsa-047011	Homo sapiens	95.78	0.00e+00	1293.00
IUUC-Itr-048040	Ictidomys tridecemlineatus	95.83	0.00e+00	1261.00
IUUC-Lch-050437	Latimeria chalumnae	91.15	0.00e+00	1095.00
IUUC-Loc-052819	Lepisosteus oculatus	92.34	0.00e+00	1218.00
IUUC-Laf-053862	Loxodonta africana	96.80	0.00e+00	1255.00
IUUC-Mcc-055735	Macaca mulatta	91.79	0.00e+00	1275.00
IUUC-Mmr-061207	Microcebus murinus	96.55	0.00e+00	1251.00
IUUC-Mdo-062493	Monodelphis domestica	95.40	0.00e+00	1334.00
IUUC-Mpu-065819	Mustela putorius furo	96.42	0.00e+00	1313.00
IUUC-Mlu-067047	Myotis lucifugus	95.65	0.00e+00	1269.00
IUUC-Nle-069684	Nomascus leucogenys	95.52	0.00e+00	1283.00
IUUC-Opr-071172	Ochotona princeps	95.14	0.00e+00	1265.00
IUUC-Ont-072102	Oreochromis niloticus	81.96	0.00e+00	1170.00
IUUC-Ocu-074592	Oryctolagus cuniculus	92.84	0.00e+00	1290.00
IUUC-Ola-087267	Oryzias latipes	78.95	0.00e+00	1079.00
IUUC-Oga-088629	Otolemur garnettii	97.19	0.00e+00	1257.00
IUUC-Oar-089551	Ovis aries	94.64	0.00e+00	1260.00
IUUC-Ptr-091207	Pan troglodytes	95.40	0.00e+00	1286.00
IUUC-Pan-091822	Papio anubis	91.79	0.00e+00	1275.00
IUUC-Psi-093594	Pelodiscus sinensis	96.26	0.00e+00	1265.00
IUUC-Pfo-096239	Poecilia formosa	82.08	0.00e+00	1179.00
IUUC-Pab-097687	Pongo abelii	95.74	0.00e+00	1275.00
IUUC-Pca-100675	Procavia capensis	96.17	0.00e+00	1036.00
IUUC-Pva-102355	Pteropus vampyrus	91.42	0.00e+00	1181.00
IUUC-Rno-106027	Rattus norvegicus	98.59	0.00e+00	1330.00
IUUC-Sha-107419	Sarcophilus harrisii	90.54	0.00e+00	1253.00
IUUC-Sar-113585	Sorex araneus	84.89	0.00e+00	706.00
IUUC-Ssc-116151	Sus scrofa	95.52	0.00e+00	1279.00
IUUC-Tgu-117387	Taeniopygia guttata	93.86	0.00e+00	1300.00
IUUC-Tru-118051	Takifugu rubripes	79.43	0.00e+00	1135.00
IUUC-Tsy-119342	Tarsius syrichta	88.21	0.00e+00	995.00
IUUC-Tbe-127881	Tupaia belangeri	92.97	0.00e+00	1258.00
IUUC-Xtr-131792	Xenopus tropicalis	87.67	0.00e+00	1214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence