iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074346

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02039306

Gene Name

RNFT1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000021230.1	ENSOCUT00000026941.1	ENSOCUP00000021031.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-07	31.4	339	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ +f++ p++l C+H+f+++C+  w       ++e +CPlCr
   Q: 339  CSICQAEFQK-PILLICQHIFCEECITLW------FNREKTCPLCR 377
           **********.999***************......**********8 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

VMQANYNQLH SPLGTAGGED ASASQCIHTR LTGEGSCLHS GDVRIQMNSI PKECAGNPSS 60
RNARSGTHSC THGCVHGRFR SHSHSEARQP EDPAMESGEQ GSSSFSEFRY LFKWLQKSLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCATGCAAG CCAATTATAA CCAACTGCAC AGTCCGCTAG GAACTGCAGG TGGTGAGGAT 60
GCCTCAGCCT CCCAGTGCAT CCATACAAGA TTGACAGGCG AAGGTTCTTG TCTTCATTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000709	Aegilops tauschii	27.17	1.00e-26	113.00
IUUC-Aml-001586	Ailuropoda melanoleuca	88.47	0.00e+00	680.00
IUUC-Apl-003875	Anas platyrhynchos	72.18	2.00e-140	491.00
IUUC-Aca-004325	Anolis carolinensis	64.46	2.00e-128	452.00
IUUC-Aly-005949	Arabidopsis lyrata	27.44	7.00e-38	151.00
IUUC-Ath-007582	Arabidopsis thaliana	29.55	1.00e-37	150.00
IUUC-Ame-010748	Astyanax mexicanus	56.65	3.00e-95	342.00
IUUC-Bta-013167	Bos taurus	88.47	0.00e+00	684.00
IUUC-Bol-015956	Brassica oleracea	28.96	7.00e-34	137.00
IUUC-Bra-016928	Brassica rapa	29.55	1.00e-35	144.00
IUUC-Cel-018190	Caenorhabditis elegans	24.23	5.00e-21	95.50
IUUC-Cja-019669	Callithrix jacchus	88.94	0.00e+00	709.00
IUUC-Cfa-020610	Canis familiaris	89.20	0.00e+00	712.00
IUUC-Cpo-021979	Cavia porcellus	89.72	0.00e+00	656.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	41.94	3.00e-11	62.80
IUUC-Csa-023752	Chlorocebus sabaeus	89.47	0.00e+00	720.00
IUUC-Cho-024880	Choloepus hoffmanni	79.20	7.00e-169	586.00
IUUC-Dre-028522	Danio rerio	59.25	3.00e-91	328.00
IUUC-Dno-029312	Dasypus novemcinctus	88.89	0.00e+00	671.00
IUUC-Dor-030524	Dipodomys ordii	79.75	2.00e-133	468.00
IUUC-Dme-031681	Drosophila melanogaster	31.31	4.00e-30	126.00
IUUC-Ete-032456	Echinops telfairi	78.50	3.00e-172	597.00
IUUC-Eeu-034649	Erinaceus europaeus	84.02	4.00e-91	328.00
IUUC-Fca-036321	Felis catus	85.50	0.00e+00	681.00
IUUC-Fal-036873	Ficedula albicollis	70.75	4.00e-138	484.00
IUUC-Gmo-038501	Gadus morhua	48.13	9.00e-88	317.00
IUUC-Gga-040583	Gallus gallus	66.33	1.00e-128	452.00
IUUC-Gac-042530	Gasterosteus aculeatus	53.46	2.00e-89	322.00
IUUC-Gma-043370	Glycine max	30.14	6.00e-35	141.00
IUUC-Ggo-045577	Gorilla gorilla	86.75	0.00e+00	696.00
IUUC-Hsa-046395	Homo sapiens	89.47	0.00e+00	716.00
IUUC-Hvu-047080	Hordeum vulgare	29.41	9.00e-29	120.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	91.46	0.00e+00	727.00
IUUC-Lch-049516	Latimeria chalumnae	59.55	3.00e-127	448.00
IUUC-Loc-052692	Lepisosteus oculatus	54.39	3.00e-99	355.00
IUUC-Laf-054478	Loxodonta africana	91.23	0.00e+00	727.00
IUUC-Mcc-055064	Macaca mulatta	87.64	3.00e-173	600.00
IUUC-Meu-056056	Macropus eugenii	69.83	2.00e-138	484.00
IUUC-Mtr-057979	Medicago truncatula	28.25	2.00e-37	149.00
IUUC-Mga-059908	Meleagris gallopavo	81.42	3.00e-107	380.00
IUUC-Mdo-063071	Monodelphis domestica	81.80	0.00e+00	641.00
IUUC-Mmu-063446	Mus musculus	86.18	0.00e+00	638.00
IUUC-Mac-065493	Musa acuminata	29.30	4.00e-39	155.00
IUUC-Mpu-065810	Mustela putorius furo	88.33	0.00e+00	632.00
IUUC-Nle-069009	Nomascus leucogenys	87.97	0.00e+00	729.00
IUUC-Ont-071863	Oreochromis niloticus	55.87	4.00e-86	311.00
IUUC-Oan-073490	Ornithorhynchus anatinus	79.95	1.00e-174	605.00
IUUC-Oru-085138	Oryza rufipogon	28.94	2.00e-32	133.00
IUUC-Ola-086809	Oryzias latipes	56.16	9.00e-83	300.00
IUUC-Oga-087950	Otolemur garnettii	88.97	0.00e+00	682.00
IUUC-Oar-089816	Ovis aries	89.72	0.00e+00	691.00
IUUC-Ptr-090736	Pan troglodytes	89.47	0.00e+00	716.00
IUUC-Pan-091961	Papio anubis	84.41	9.00e-91	325.00
IUUC-Psi-093766	Pelodiscus sinensis	81.79	4.00e-138	483.00
IUUC-Ppa-095990	Physcomitrella patens	28.43	3.00e-36	145.00
IUUC-Pfo-097090	Poecilia formosa	57.58	2.00e-80	292.00
IUUC-Pab-098474	Pongo abelii	90.48	0.00e+00	719.00
IUUC-Pop-098860	Populus trichocarpa	29.19	6.00e-39	154.00
IUUC-Pca-100864	Procavia capensis	80.89	5.00e-117	414.00
IUUC-Ppe-101186	Prunus persica	27.21	1.00e-29	124.00
IUUC-Rno-105126	Rattus norvegicus	84.42	0.00e+00	637.00
IUUC-Sce-106136	Saccharomyces cerevisiae	52.78	7.00e-06	45.80
IUUC-Sha-107537	Sarcophilus harrisii	80.50	0.00e+00	639.00
IUUC-Smo-109495	Selaginella moellendorffii	29.53	4.00e-37	148.00
IUUC-Sit-110120	Setaria italica	29.79	9.00e-34	138.00
IUUC-Sly-111923	Solanum lycopersicum	28.52	4.00e-37	148.00
IUUC-Stu-112700	Solanum tuberosum	29.58	1.00e-31	130.00
IUUC-Sar-113494	Sorex araneus	77.72	8.00e-65	240.00
IUUC-Ssc-116039	Sus scrofa	87.54	4.00e-159	553.00
IUUC-Tgu-117409	Taeniopygia guttata	82.83	3.00e-132	464.00
IUUC-Tru-117926	Takifugu rubripes	50.27	1.00e-82	299.00
IUUC-Tsy-118995	Tarsius syrichta	89.72	0.00e+00	685.00
IUUC-Tni-120361	Tetraodon nigroviridis	55.66	2.00e-88	318.00
IUUC-Tca-121544	Theobroma cacao	29.14	2.00e-37	150.00
IUUC-Tae-124755	Triticum aestivum	28.52	2.00e-35	144.00
IUUC-Tbe-128158	Tupaia belangeri	70.85	6.00e-143	500.00
IUUC-Ttr-128496	Tursiops truncatus	87.97	0.00e+00	676.00
IUUC-Vpa-130045	Vicugna pacos	70.17	3.00e-89	322.00
IUUC-Vvi-131323	Vitis vinifera	31.19	2.00e-34	140.00
IUUC-Xtr-132923	Xenopus tropicalis	56.72	2.00e-112	398.00
IUUC-Xma-134146	Xiphophorus maculatus	58.92	2.00e-85	309.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence