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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-063420
Ensembl Protein ID ENSMUSP00000021645.7
UniProt Accession Q99LF7; Q99LF7_MOUSE
Genbank Protein ID AAH03284.1
Protein Name DDB1 and CUL4-associated factor 4; WD repeat domain 21
Genbank Nucleotide ID AC139382
Gene Name Dcaf4; Wdr21
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000021222.8 ENSMUST00000021645.7 ENSMUSP00000021645.7
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
miRTarBasemicroRNATRANSFACRepTar
miRNAMapRAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.20e-07 30.3 370 407
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtcla.fsd.tllvsGsdDgtikvWDlrtgvllk 37
           H + vt+++ f +  +l ++   g+ik+WDlr  ++++
   Q: 370  HDSAVTSVQvFKEeQHLMASDMSGKIKLWDLRATKCVR 407
           999*****96744489999999**********999987 PP
   
Organism Mus musculus
Protein Sequence
(Fasta)
MDRNIWKSRR RRGRSRHQSP ALGQCDSSER YATGASQSSQ DSGHHDAESP STSSSRTGES 60
SVPELPGFYF DPEKNRYFRL LPGHNNCNPL TKEGIQQKEM ESRRLQLLQQ EDMQKKKITR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-063420|E3,WD_repeat|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GACAGGCAGA AGCCTAATTC AATGAGAAGA AAGAACCGGC CGCTTTAGTC CTATGGGGTG 60
CGACAACACA ACATGAGGGT CTTTCCGGAT CTTTGCACGC CCCTGGGTGC TCCAGCCCAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-063420|E3,WD_repeat|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0008380--P:RNA splicing
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001176 Aegilops tauschii 31.43 1.00e-11 63.50
IUUC-Aml-001929 Ailuropoda melanoleuca 80.28 0.00e+00 784.00
IUUC-Atr-002556 Amborella trichopoda 30.99 2.00e-14 73.90
IUUC-Apl-003177 Anas platyrhynchos 67.27 3.00e-171 594.00
IUUC-Aca-004610 Anolis carolinensis 64.48 0.00e+00 635.00
IUUC-Aly-005883 Arabidopsis lyrata 25.28 6.00e-16 78.60
IUUC-Ath-006668 Arabidopsis thaliana 32.32 1.00e-14 74.70
IUUC-Afl-008573 Aspergillus flavus 54.55 2.00e-03 37.00
IUUC-Aor-010226 Aspergillus oryzae 54.55 1.00e-03 37.40
IUUC-Ate-010340 Aspergillus terreus 22.10 7.00e-10 58.90
IUUC-Ame-010690 Astyanax mexicanus 60.68 1.00e-152 533.00
IUUC-Bta-012668 Bos taurus 79.53 0.00e+00 714.00
IUUC-Bdi-014848 Brachypodium distachyon 33.77 1.00e-13 70.90
IUUC-Bol-016035 Brassica oleracea 33.14 2.00e-15 77.40
IUUC-Bra-016687 Brassica rapa 32.57 2.00e-14 73.90
IUUC-Cja-019560 Callithrix jacchus 78.26 2.00e-74 270.00
IUUC-Cfa-020441 Canis familiaris 80.08 0.00e+00 767.00
IUUC-Cpo-021299 Cavia porcellus 75.99 0.00e+00 765.00
IUUC-Csa-023185 Chlorocebus sabaeus 83.66 0.00e+00 785.00
IUUC-Cho-024353 Choloepus hoffmanni 77.15 0.00e+00 778.00
IUUC-Dno-029890 Dasypus novemcinctus 78.48 0.00e+00 728.00
IUUC-Dor-030618 Dipodomys ordii 80.53 3.00e-90 325.00
IUUC-Ete-032557 Echinops telfairi 68.60 5.00e-134 471.00
IUUC-Eca-033466 Equus caballus 78.18 0.00e+00 793.00
IUUC-Eeu-034995 Erinaceus europaeus 69.32 2.00e-141 494.00
IUUC-Fca-036199 Felis catus 80.54 0.00e+00 761.00
IUUC-Fal-036717 Ficedula albicollis 68.12 9.00e-171 593.00
IUUC-Gmo-039201 Gadus morhua 58.37 2.00e-152 532.00
IUUC-Gga-040398 Gallus gallus 68.66 8.00e-159 553.00
IUUC-Gac-042391 Gasterosteus aculeatus 54.45 1.00e-159 556.00
IUUC-Gma-042906 Glycine max 26.42 1.00e-09 58.20
IUUC-Ggo-045348 Gorilla gorilla 83.33 0.00e+00 793.00
IUUC-Hsa-046746 Homo sapiens 83.55 0.00e+00 797.00
IUUC-Hvu-047825 Hordeum vulgare 33.76 5.00e-16 79.00
IUUC-Itr-048472 Ictidomys tridecemlineatus 81.29 0.00e+00 778.00
IUUC-Lch-050272 Latimeria chalumnae 57.05 2.00e-146 512.00
IUUC-Lpe-051618 Leersia perrieri 28.66 4.00e-12 66.60
IUUC-Loc-051772 Lepisosteus oculatus 60.32 3.00e-164 571.00
IUUC-Laf-054577 Loxodonta africana 69.10 3.00e-178 617.00
IUUC-Mcc-055284 Macaca mulatta 72.19 0.00e+00 645.00
IUUC-Meu-056721 Macropus eugenii 64.34 9.00e-93 333.00
IUUC-Mtr-058472 Medicago truncatula 28.57 3.00e-12 67.00
IUUC-Mga-059238 Meleagris gallopavo 68.85 8.00e-162 563.00
IUUC-Mmr-061642 Microcebus murinus 84.39 0.00e+00 681.00
IUUC-Mdo-062030 Monodelphis domestica 69.85 0.00e+00 634.00
IUUC-Mac-065231 Musa acuminata 32.85 2.00e-16 80.50
IUUC-Mpu-065692 Mustela putorius furo 80.28 0.00e+00 783.00
IUUC-Mlu-067428 Myotis lucifugus 81.03 0.00e+00 776.00
IUUC-Nle-070145 Nomascus leucogenys 82.38 0.00e+00 798.00
IUUC-Opr-071081 Ochotona princeps 75.45 0.00e+00 698.00
IUUC-Ont-071302 Oreochromis niloticus 60.05 3.00e-154 538.00
IUUC-Oan-073494 Ornithorhynchus anatinus 58.40 5.00e-126 444.00
IUUC-Ocu-073925 Oryctolagus cuniculus 82.53 0.00e+00 747.00
IUUC-Oba-075797 Oryza barthii 27.67 2.00e-12 67.00
IUUC-Obr-076014 Oryza brachyantha 28.85 2.00e-13 70.50
IUUC-Ogl-077201 Oryza glaberrima 27.67 3.00e-12 66.60
IUUC-Ogu-078056 Oryza glumaepatula 27.67 2.00e-12 67.00
IUUC-Oin-080062 Oryza indica 27.67 2.00e-12 67.00
IUUC-Olo-080869 Oryza longistaminata 27.67 3.00e-12 67.80
IUUC-Ome-081820 Oryza meridionalis 27.67 1.00e-12 67.80
IUUC-Oni-082497 Oryza nivara 27.67 2.00e-12 67.00
IUUC-Opu-083780 Oryza punctata 25.14 7.00e-11 63.20
IUUC-Oru-085091 Oryza rufipogon 27.67 2.00e-12 67.00
IUUC-Osa-085725 Oryza sativa 27.67 2.00e-12 67.00
IUUC-Ola-087033 Oryzias latipes 60.00 4.00e-143 501.00
IUUC-Oga-088861 Otolemur garnettii 78.18 0.00e+00 753.00
IUUC-Oar-090048 Ovis aries 80.00 0.00e+00 765.00
IUUC-Ptr-091658 Pan troglodytes 83.12 0.00e+00 792.00
IUUC-Pan-092873 Papio anubis 80.68 0.00e+00 788.00
IUUC-Psi-093421 Pelodiscus sinensis 67.41 4.00e-177 614.00
IUUC-Pma-094216 Petromyzon marinus 42.27 1.00e-92 333.00
IUUC-Ppa-095186 Physcomitrella patens 47.76 4.00e-10 59.70
IUUC-Pfo-096178 Poecilia formosa 57.98 6.00e-145 507.00
IUUC-Pab-098037 Pongo abelii 69.44 1.00e-160 559.00
IUUC-Pop-099334 Populus trichocarpa 31.48 1.00e-15 76.60
IUUC-Pca-100845 Procavia capensis 68.55 0.00e+00 665.00
IUUC-Pva-103203 Pteropus vampyrus 78.63 0.00e+00 771.00
IUUC-Rno-105675 Rattus norvegicus 93.64 0.00e+00 932.00
IUUC-Sha-107389 Sarcophilus harrisii 73.39 0.00e+00 654.00
IUUC-Spo-108190 Schizosaccharomyces pombe 25.33 3.00e-07 49.70
IUUC-Sit-110421 Setaria italica 30.39 1.00e-13 70.90
IUUC-Sly-110888 Solanum lycopersicum 24.23 2.00e-07 50.80
IUUC-Sar-113185 Sorex araneus 62.73 4.00e-154 538.00
IUUC-Sbi-114182 Sorghum bicolor 39.47 1.00e-12 65.90
IUUC-Ssc-116005 Sus scrofa 81.40 0.00e+00 785.00
IUUC-Tgu-117023 Taeniopygia guttata 64.89 5.00e-164 570.00
IUUC-Tru-118221 Takifugu rubripes 58.43 1.00e-150 526.00
IUUC-Tsy-118784 Tarsius syrichta 69.70 4.00e-167 580.00
IUUC-Tni-120072 Tetraodon nigroviridis 57.77 8.00e-152 530.00
IUUC-Tca-121267 Theobroma cacao 25.81 7.00e-18 85.50
IUUC-Tae-124900 Triticum aestivum 33.12 4.00e-16 78.60
IUUC-Tur-126655 Triticum urartu 33.12 4.00e-16 78.60
IUUC-Tbe-127243 Tupaia belangeri 69.82 0.00e+00 649.00
IUUC-Ttr-129237 Tursiops truncatus 83.29 0.00e+00 670.00
IUUC-Vvi-131184 Vitis vinifera 26.47 8.00e-09 55.50
IUUC-Xtr-132006 Xenopus tropicalis 51.47 1.00e-125 443.00
Created Date 25-Jun-2017

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