iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000022364.14	ENSMUST00000022992.12	ENSMUSP00000022992.6
ENSMUSG00000022364.14	ENSMUST00000159775.7	ENSMUSP00000124243.1
ENSMUSG00000022364.14	ENSMUST00000161329.1	ENSMUSP00000124466.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RepTar
miRNAMap	RAID2
Protein-protein Interaction
IID	PINA	HINT	Mentha
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus	dbPTM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-06	28.5	124	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           gH++sv++++   s+++ ++ s D t ++WDl+t+
   Q: 124  GHESSVCSISVhaSGRYAITTSSD-TAQLWDLDTF 157
           8*********99888999999999.9*****9986 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MQSTDLGNKE SGKIWHRKPS PATHDGIIVN IVHSTSEYHP KVLRFLNVAF DGSGDSFIAG 60
DHQGNIYVFD LHGNRFNLVQ RTAQACTALA FNLRRKSEFL VALADYSIKC FDTVTKELVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGCCGCT CGAATTTCCC GGGTTGGGCG CGCGGGGACT GCTGGGTAGC TCTCGGGACG 60
GTTACCCTCA CCGGGTCAGC CGCGGATCGG AGTCGGGGTA GGGGTCGGGG TTCGACATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR000195--Rab-GTPase-TBC_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50086--TBC_RABGAP
PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF00566--RabGAP-TBC

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome

KEGG

mmu:210544

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001553	Ailuropoda melanoleuca	85.99	0.00e+00	1590.00
IUUC-Apl-003213	Anas platyrhynchos	73.19	0.00e+00	1306.00
IUUC-Aca-004702	Anolis carolinensis	72.15	0.00e+00	1347.00
IUUC-Bta-012765	Bos taurus	85.39	0.00e+00	1508.00
IUUC-Cja-019040	Callithrix jacchus	87.43	0.00e+00	1636.00
IUUC-Cfa-020566	Canis familiaris	86.41	0.00e+00	1568.00
IUUC-Cpo-021286	Cavia porcellus	75.47	0.00e+00	1635.00
IUUC-Dre-028164	Danio rerio	63.48	0.00e+00	1140.00
IUUC-Eca-033820	Equus caballus	79.35	0.00e+00	1632.00
IUUC-Fca-036014	Felis catus	76.71	0.00e+00	1665.00
IUUC-Fal-037606	Ficedula albicollis	72.39	0.00e+00	1139.00
IUUC-Fox-038029	Fusarium oxysporum	28.23	1.00e-11	63.50
IUUC-Gmo-039702	Gadus morhua	64.40	0.00e+00	1057.00
IUUC-Gga-040127	Gallus gallus	72.47	0.00e+00	1224.00
IUUC-Gac-041774	Gasterosteus aculeatus	63.19	0.00e+00	1152.00
IUUC-Ggo-044807	Gorilla gorilla	66.47	0.00e+00	1254.00
IUUC-Hsa-046133	Homo sapiens	87.39	0.00e+00	1642.00
IUUC-Itr-048341	Ictidomys tridecemlineatus	76.69	0.00e+00	1625.00
IUUC-Laf-053955	Loxodonta africana	82.35	0.00e+00	1641.00
IUUC-Mcc-055133	Macaca mulatta	87.16	0.00e+00	1576.00
IUUC-Mga-059365	Meleagris gallopavo	72.45	0.00e+00	1217.00
IUUC-Mmr-060967	Microcebus murinus	88.61	0.00e+00	1585.00
IUUC-Mdo-061940	Monodelphis domestica	68.03	0.00e+00	1359.00
IUUC-Mpu-066776	Mustela putorius furo	82.77	0.00e+00	1521.00
IUUC-Mlu-067051	Myotis lucifugus	76.85	0.00e+00	1631.00
IUUC-Nle-070170	Nomascus leucogenys	87.50	0.00e+00	1640.00
IUUC-Opr-071161	Ochotona princeps	80.51	0.00e+00	1511.00
IUUC-Oan-073226	Ornithorhynchus anatinus	82.85	2.00e-173	601.00
IUUC-Ocu-074283	Oryctolagus cuniculus	88.20	0.00e+00	1559.00
IUUC-Ola-087122	Oryzias latipes	63.12	0.00e+00	1156.00
IUUC-Oga-088451	Otolemur garnettii	74.95	0.00e+00	1597.00
IUUC-Oar-089779	Ovis aries	85.08	0.00e+00	1491.00
IUUC-Ptr-090826	Pan troglodytes	87.61	0.00e+00	1644.00
IUUC-Pan-092380	Papio anubis	87.05	0.00e+00	1573.00
IUUC-Psi-093491	Pelodiscus sinensis	74.29	0.00e+00	1371.00
IUUC-Pma-094672	Petromyzon marinus	56.45	2.00e-119	422.00
IUUC-Pab-098738	Pongo abelii	89.29	0.00e+00	1533.00
IUUC-Pva-102874	Pteropus vampyrus	79.72	0.00e+00	1186.00
IUUC-Rno-105316	Rattus norvegicus	83.98	0.00e+00	1751.00
IUUC-Sha-106804	Sarcophilus harrisii	72.71	0.00e+00	1390.00
IUUC-Sar-113482	Sorex araneus	75.81	4.00e-173	602.00
IUUC-Tgu-117092	Taeniopygia guttata	69.39	0.00e+00	1218.00
IUUC-Tru-117931	Takifugu rubripes	55.21	0.00e+00	1016.00
IUUC-Tni-120084	Tetraodon nigroviridis	60.98	0.00e+00	962.00
IUUC-Ttr-128747	Tursiops truncatus	73.94	0.00e+00	1501.00
IUUC-Xtr-131795	Xenopus tropicalis	70.10	0.00e+00	1262.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence