iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040023

Ensembl Protein ID

GGTG_07993T0

UniProt Accession

J3P3A5; J3P3A5_GAGT3

Genbank Protein ID

EJT74147.1

Protein Name

RNA polymerase II Elongator subunit

Genbank Nucleotide ID

ADBI01000667

Gene Name

GGTG_07993

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_07993	GGTG_07993T0	GGTG_07993T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-29	99.3	233	273

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..........sdtllvsGsdDgtikvWDlr 31
           gH+++v++l+f          sd ll+s+s D+ i++W+++
   Q: 233  GHEGWVRSLDFawedaskapqSDLLLASASQDKYIRLWRVH 273
           8*******98888******9777999*************86 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MMGSPSIDAH AIYISAGANR HSAVADWSHD GIVAYGSDAN IALWRPTDER PRGVTRLLRG 60
HKDTVKAVKF IPTGTEGDSD KETEAPSSYL VSGSDDQCLI LWELGHDGQA LLRQTLREHT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCGTCGAG ACGAATAGGA TGTTGTCACC GGGCTGGATC ACATATTCTT CCTCACCCTC 60
GAGCTCCCAG TCGGCGTCGT TGATCAAGAC AAGGATCCCT GGGCGACTGA GAGGCCACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	29.39	8.00e-84	303.00
IUUC-Aml-002049	Ailuropoda melanoleuca	31.75	3.00e-70	258.00
IUUC-Atr-002456	Amborella trichopoda	30.28	2.00e-92	332.00
IUUC-Apl-004053	Anas platyrhynchos	29.54	2.00e-92	332.00
IUUC-Aca-004535	Anolis carolinensis	28.23	6.00e-85	307.00
IUUC-Aly-005746	Arabidopsis lyrata	29.77	6.00e-98	350.00
IUUC-Ath-006664	Arabidopsis thaliana	29.90	4.00e-95	341.00
IUUC-Ago-007971	Ashbya gossypii	37.09	3.00e-134	470.00
IUUC-Acl-008173	Aspergillus clavatus	44.69	0.00e+00	659.00
IUUC-Afl-008665	Aspergillus flavus	43.90	3.00e-91	327.00
IUUC-Afu-008976	Aspergillus fumigatus	44.16	0.00e+00	646.00
IUUC-Ani-009284	Aspergillus nidulans	42.60	0.00e+00	630.00
IUUC-Ang-009809	Aspergillus niger	43.13	0.00e+00	647.00
IUUC-Aor-009959	Aspergillus oryzae	43.38	0.00e+00	650.00
IUUC-Ate-010442	Aspergillus terreus	43.81	0.00e+00	669.00
IUUC-Ame-011409	Astyanax mexicanus	30.39	1.00e-102	365.00
IUUC-Bgr-012137	Blumeria graminis	46.17	0.00e+00	679.00
IUUC-Bta-012892	Bos taurus	29.49	8.00e-96	343.00
IUUC-Bci-013944	Botrytis cinerea	47.23	0.00e+00	678.00
IUUC-Bdi-014512	Brachypodium distachyon	29.28	3.00e-87	315.00
IUUC-Bol-015741	Brassica oleracea	29.90	4.00e-102	364.00
IUUC-Bra-017367	Brassica rapa	28.96	4.00e-100	357.00
IUUC-Cel-018712	Caenorhabditis elegans	26.23	1.00e-60	226.00
IUUC-Cja-018865	Callithrix jacchus	28.26	3.00e-91	328.00
IUUC-Cfa-021006	Canis familiaris	29.72	4.00e-96	344.00
IUUC-Cpo-021370	Cavia porcellus	28.26	4.00e-92	331.00
IUUC-Csa-023845	Chlorocebus sabaeus	28.82	5.00e-94	337.00
IUUC-Cho-024640	Choloepus hoffmanni	28.44	1.00e-55	209.00
IUUC-Cin-025772	Ciona intestinalis	28.57	6.00e-90	323.00
IUUC-Csv-025891	Ciona savignyi	28.05	3.00e-87	315.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	51.42	0.00e+00	811.00
IUUC-Cne-027081	Cryptococcus neoformans	31.89	9.00e-86	310.00
IUUC-Cme-027225	Cyanidioschyzon merolae	26.17	7.00e-28	117.00
IUUC-Dre-028250	Danio rerio	31.30	3.00e-100	358.00
IUUC-Dno-028847	Dasypus novemcinctus	29.38	3.00e-96	344.00
IUUC-Dor-030351	Dipodomys ordii	28.87	1.00e-96	346.00
IUUC-Dse-031317	Dothistroma septosporum	42.92	1.00e-171	595.00
IUUC-Dme-032019	Drosophila melanogaster	32.06	3.00e-102	364.00
IUUC-Ete-033194	Echinops telfairi	27.34	3.00e-50	191.00
IUUC-Eca-033779	Equus caballus	30.28	3.00e-99	354.00
IUUC-Eeu-034790	Erinaceus europaeus	29.29	7.00e-49	187.00
IUUC-Fca-036090	Felis catus	29.88	2.00e-94	338.00
IUUC-Fal-037663	Ficedula albicollis	27.97	9.00e-85	306.00
IUUC-Fox-037828	Fusarium oxysporum	51.28	0.00e+00	818.00
IUUC-Fso-038462	Fusarium solani	53.50	0.00e+00	809.00
IUUC-Gmo-039450	Gadus morhua	30.74	3.00e-96	344.00
IUUC-Gga-040480	Gallus gallus	29.37	1.00e-98	352.00
IUUC-Gac-041544	Gasterosteus aculeatus	31.50	2.00e-97	348.00
IUUC-Gma-044048	Glycine max	30.03	8.00e-98	350.00
IUUC-Ggo-045381	Gorilla gorilla	27.89	3.00e-86	311.00
IUUC-Hsa-046096	Homo sapiens	27.94	1.00e-88	319.00
IUUC-Hvu-047494	Hordeum vulgare	29.05	3.00e-92	331.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	29.20	7.00e-70	257.00
IUUC-Kpa-049241	Komagataella pastoris	32.83	2.00e-113	401.00
IUUC-Lch-050512	Latimeria chalumnae	29.81	4.00e-94	337.00
IUUC-Lpe-051448	Leersia perrieri	29.81	4.00e-93	334.00
IUUC-Loc-051882	Lepisosteus oculatus	30.91	2.00e-102	365.00
IUUC-Lma-053023	Leptosphaeria maculans	43.22	0.00e+00	635.00
IUUC-Laf-054519	Loxodonta africana	29.90	1.00e-95	342.00
IUUC-Mcc-055580	Macaca mulatta	27.36	8.00e-85	306.00
IUUC-Meu-056606	Macropus eugenii	30.51	1.00e-23	103.00
IUUC-Mor-057109	Magnaporthe oryzae	61.81	0.00e+00	1048.00
IUUC-Mpo-057297	Magnaporthe poae	75.39	0.00e+00	1334.00
IUUC-Mtr-058348	Medicago truncatula	30.37	2.00e-103	368.00
IUUC-Mla-059159	Melampsora laricipopulina	32.78	3.00e-81	295.00
IUUC-Mga-059778	Meleagris gallopavo	28.99	1.00e-60	226.00
IUUC-Mvi-060447	Microbotryum violaceum	31.22	4.00e-95	340.00
IUUC-Mmr-061139	Microcebus murinus	30.86	2.00e-80	292.00
IUUC-Mdo-061866	Monodelphis domestica	30.00	4.00e-102	364.00
IUUC-Mmu-063390	Mus musculus	29.12	6.00e-90	323.00
IUUC-Mac-064693	Musa acuminata	30.13	2.00e-102	365.00
IUUC-Mpu-066547	Mustela putorius furo	29.54	1.00e-92	332.00
IUUC-Mlu-067156	Myotis lucifugus	29.63	2.00e-96	345.00
IUUC-Nfi-068616	Neosartorya fischeri	44.48	0.00e+00	662.00
IUUC-Ncr-068915	Neurospora crassa	48.77	0.00e+00	799.00
IUUC-Nle-069958	Nomascus leucogenys	29.31	5.00e-90	324.00
IUUC-Opr-071093	Ochotona princeps	24.89	4.00e-32	131.00
IUUC-Ont-072178	Oreochromis niloticus	31.61	1.00e-102	365.00
IUUC-Oan-073667	Ornithorhynchus anatinus	29.06	2.00e-86	311.00
IUUC-Ocu-074662	Oryctolagus cuniculus	29.52	6.00e-91	327.00
IUUC-Oba-075577	Oryza barthii	29.60	2.00e-96	345.00
IUUC-Obr-076566	Oryza brachyantha	29.73	1.00e-96	345.00
IUUC-Ogl-077054	Oryza glaberrima	29.60	2.00e-96	345.00
IUUC-Ogu-078846	Oryza glumaepatula	29.60	9.00e-96	343.00
IUUC-Oin-079084	Oryza indica	29.77	7.00e-96	343.00
IUUC-Olo-080933	Oryza longistaminata	27.38	1.00e-75	276.00
IUUC-Ome-081500	Oryza meridionalis	27.58	2.00e-80	292.00
IUUC-Oni-082352	Oryza nivara	29.47	8.00e-96	343.00
IUUC-Opu-084116	Oryza punctata	29.27	3.00e-94	338.00
IUUC-Oru-085249	Oryza rufipogon	29.77	7.00e-96	343.00
IUUC-Osa-086270	Oryza sativa	29.77	7.00e-96	343.00
IUUC-Ola-086625	Oryzias latipes	33.40	7.00e-51	194.00
IUUC-Olu-087638	Ostreococcus lucimarinus	29.38	7.00e-60	223.00
IUUC-Oga-088634	Otolemur garnettii	29.31	8.00e-73	267.00
IUUC-Oar-089475	Ovis aries	29.42	3.00e-94	338.00
IUUC-Ptr-091131	Pan troglodytes	28.63	2.00e-92	332.00
IUUC-Pan-092869	Papio anubis	28.90	2.00e-95	342.00
IUUC-Psi-093146	Pelodiscus sinensis	30.82	7.00e-83	300.00
IUUC-Pma-094479	Petromyzon marinus	29.00	2.00e-86	311.00
IUUC-Pno-095061	Phaeosphaeria nodorum	41.74	1.00e-138	485.00
IUUC-Ppa-095618	Physcomitrella patens	31.15	3.00e-93	335.00
IUUC-Pfo-096816	Poecilia formosa	30.70	5.00e-98	350.00
IUUC-Pab-097548	Pongo abelii	28.78	2.00e-93	335.00
IUUC-Pop-099643	Populus trichocarpa	31.42	9.00e-98	349.00
IUUC-Pca-100983	Procavia capensis	26.11	2.00e-38	152.00
IUUC-Ppe-101301	Prunus persica	31.16	1.00e-98	352.00
IUUC-Pva-102460	Pteropus vampyrus	29.18	3.00e-90	324.00
IUUC-Pgr-103507	Puccinia graminis	28.94	4.00e-80	291.00
IUUC-Ptt-103892	Puccinia triticina	28.96	5.00e-71	260.00
IUUC-Pte-104283	Pyrenophora teres	43.59	0.00e+00	635.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	43.19	2.00e-178	618.00
IUUC-Rno-105842	Rattus norvegicus	28.66	5.00e-92	330.00
IUUC-Sce-106459	Saccharomyces cerevisiae	36.29	1.00e-128	452.00
IUUC-Sha-106586	Sarcophilus harrisii	31.41	1.00e-56	213.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	32.29	6.00e-105	373.00
IUUC-Spo-108302	Schizosaccharomyces pombe	35.06	8.00e-116	409.00
IUUC-Smo-108919	Selaginella moellendorffii	28.60	1.00e-88	319.00
IUUC-Sit-109915	Setaria italica	29.39	1.00e-92	332.00
IUUC-Sly-111714	Solanum lycopersicum	29.72	1.00e-95	342.00
IUUC-Stu-112631	Solanum tuberosum	29.54	3.00e-95	341.00
IUUC-Sar-113200	Sorex araneus	27.44	1.00e-51	196.00
IUUC-Sbi-114582	Sorghum bicolor	30.23	3.00e-96	345.00
IUUC-Sre-115001	Sporisorium reilianum	29.26	1.00e-51	197.00
IUUC-Ssc-115519	Sus scrofa	29.15	2.00e-95	341.00
IUUC-Tgu-116987	Taeniopygia guttata	29.50	2.00e-89	322.00
IUUC-Tru-118476	Takifugu rubripes	31.34	8.00e-100	356.00
IUUC-Tsy-119230	Tarsius syrichta	40.85	6.00e-26	111.00
IUUC-Tni-120448	Tetraodon nigroviridis	27.25	3.00e-30	125.00
IUUC-Tca-121650	Theobroma cacao	31.16	2.00e-96	345.00
IUUC-Tre-122086	Trichoderma reesei	53.37	0.00e+00	796.00
IUUC-Tvi-122397	Trichoderma virens	53.68	0.00e+00	772.00
IUUC-Tae-123972	Triticum aestivum	29.63	4.00e-91	327.00
IUUC-Tur-126578	Triticum urartu	29.53	3.00e-90	325.00
IUUC-Tme-126927	Tuber melanosporum	40.62	3.00e-148	517.00
IUUC-Tbe-127922	Tupaia belangeri	37.92	8.00e-39	154.00
IUUC-Ttr-128918	Tursiops truncatus	29.46	5.00e-95	340.00
IUUC-Uma-129474	Ustilago maydis	29.41	1.00e-50	194.00
IUUC-Vda-129944	Verticillium dahliae	52.28	0.00e+00	826.00
IUUC-Vpa-130693	Vicugna pacos	30.38	7.00e-93	333.00
IUUC-Vvi-130949	Vitis vinifera	31.36	3.00e-100	357.00
IUUC-Xtr-132639	Xenopus tropicalis	27.96	5.00e-88	317.00
IUUC-Xma-134223	Xiphophorus maculatus	33.33	2.00e-66	245.00
IUUC-Yli-134601	Yarrowia lipolytica	36.01	7.00e-134	469.00
IUUC-Zma-135952	Zea mays	30.22	9.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence