iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	PINA
Protein 3D Structure
PDB	MMDB
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UBQ/UBQ_Other	90.24	4.00e-39	156.00	IUUC-Hsa-046891

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Functional Description
(View)

Ubiquitin-like modifier which can be covalently attached via an isopeptide bond to substrate proteins as a monomer or a lysine-linked polymer (By similarity). The so-called ufmylation requires the ufm-1-activating E1 enzyme uba-5, the ufm-1-conjugating E2 enzyme ufc-1, and probably the ufm-1-ligase E3 enzyme ufl-1 (PubMed:23449979).

Protein Sequence
(Fasta)

MSGGTAATTA GSKVTFKITL TSDPKLPFKV LSVPESTPFT AVLKFAAEEF KVPAATSAII 60
TNDGVGVNPA QPAGNIFLKH GSELRLIPRD RVGH 94

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAAACTG GACGATTATT ATTGATTTTA TGCGAGAGAT TTTCAGGAAT GTCGGGTGGA 60
ACAGCAGCAA CAACTGCCGG TTCCAAGGTG ACCTTCAAAA TCACTCTAAC AAGTGATCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR029071--Ubiquitin-rel_dom
IPR005375--UFM1

Pfam

PF03671--Ufm1

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:1990592--P:protein K69-linked ufmylation

KEGG

cel:CELE_ZK652.3

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002340	Ailuropoda melanoleuca	90.24	6.00e-41	156.00
IUUC-Atr-002692	Amborella trichopoda	85.54	1.00e-38	149.00
IUUC-Apl-003216	Anas platyrhynchos	89.02	1.00e-40	155.00
IUUC-Aca-004340	Anolis carolinensis	90.24	2.00e-40	155.00
IUUC-Aly-005396	Arabidopsis lyrata	83.53	1.00e-38	149.00
IUUC-Ath-007254	Arabidopsis thaliana	84.34	4.00e-38	147.00
IUUC-Bdi-014766	Brachypodium distachyon	85.19	2.00e-37	145.00
IUUC-Bol-015854	Brassica oleracea	84.34	2.00e-38	148.00
IUUC-Bra-017056	Brassica rapa	84.34	2.00e-38	147.00
IUUC-Cja-019654	Callithrix jacchus	90.24	6.00e-41	156.00
IUUC-Cfa-020773	Canis familiaris	90.24	6.00e-41	156.00
IUUC-Cre-022911	Chlamydomonas reinhardtii	81.72	2.00e-39	152.00
IUUC-Csa-023159	Chlorocebus sabaeus	90.24	6.00e-41	156.00
IUUC-Cin-025175	Ciona intestinalis	86.59	1.00e-38	149.00
IUUC-Csv-025838	Ciona savignyi	84.15	1.00e-37	145.00
IUUC-Dre-028404	Danio rerio	91.46	4.00e-41	157.00
IUUC-Dno-029917	Dasypus novemcinctus	87.50	6.00e-39	150.00
IUUC-Dme-031742	Drosophila melanogaster	87.95	6.00e-40	153.00
IUUC-Eca-034203	Equus caballus	89.02	2.00e-40	154.00
IUUC-Fca-035910	Felis catus	90.24	6.00e-41	156.00
IUUC-Fal-036934	Ficedula albicollis	90.24	5.00e-41	156.00
IUUC-Gga-040278	Gallus gallus	89.02	9.00e-41	155.00
IUUC-Gma-043236	Glycine max	84.52	9.00e-39	149.00
IUUC-Hsa-046891	Homo sapiens	90.24	5.00e-41	156.00
IUUC-Hvu-047577	Hordeum vulgare	76.34	1.00e-37	146.00
IUUC-Itr-048991	Ictidomys tridecemlineatus	90.24	7.00e-41	156.00
IUUC-Lpe-051293	Leersia perrieri	86.42	1.00e-37	145.00
IUUC-Loc-051783	Lepisosteus oculatus	90.24	9.00e-41	155.00
IUUC-Meu-056072	Macropus eugenii	90.48	2.00e-30	122.00
IUUC-Mtr-058403	Medicago truncatula	83.53	1.00e-38	149.00
IUUC-Mga-059440	Meleagris gallopavo	86.36	1.00e-19	86.30
IUUC-Mmr-061477	Microcebus murinus	85.53	9.00e-35	135.00
IUUC-Mdo-062878	Monodelphis domestica	89.02	2.00e-40	155.00
IUUC-Mmu-063120	Mus musculus	90.24	5.00e-41	156.00
IUUC-Mac-065340	Musa acuminata	78.65	1.00e-38	149.00
IUUC-Mpu-066256	Mustela putorius furo	90.24	5.00e-41	156.00
IUUC-Mlu-067449	Myotis lucifugus	90.24	5.00e-41	156.00
IUUC-Nle-069109	Nomascus leucogenys	90.24	6.00e-41	156.00
IUUC-Opr-070387	Ochotona princeps	69.84	2.00e-21	91.70
IUUC-Ocu-074677	Oryctolagus cuniculus	90.24	6.00e-41	156.00
IUUC-Oba-075987	Oryza barthii	86.42	2.00e-37	145.00
IUUC-Obr-076359	Oryza brachyantha	86.42	2.00e-37	145.00
IUUC-Ogl-077776	Oryza glaberrima	86.42	2.00e-37	145.00
IUUC-Ogu-078176	Oryza glumaepatula	86.42	2.00e-37	145.00
IUUC-Oin-079729	Oryza indica	86.42	2.00e-37	145.00
IUUC-Olo-080276	Oryza longistaminata	27.78	4.60e-01	28.10
IUUC-Ome-082009	Oryza meridionalis	86.42	2.00e-37	145.00
IUUC-Oni-082503	Oryza nivara	86.42	2.00e-37	145.00
IUUC-Opu-084099	Oryza punctata	86.42	1.00e-37	145.00
IUUC-Oru-084912	Oryza rufipogon	86.42	2.00e-37	145.00
IUUC-Osa-085481	Oryza sativa	86.42	2.00e-37	145.00
IUUC-Ola-086978	Oryzias latipes	91.46	3.00e-41	157.00
IUUC-Oga-088728	Otolemur garnettii	92.06	6.00e-31	123.00
IUUC-Ptr-091085	Pan troglodytes	90.24	6.00e-41	156.00
IUUC-Pan-092802	Papio anubis	90.24	6.00e-41	156.00
IUUC-Psi-093487	Pelodiscus sinensis	90.24	2.00e-40	156.00
IUUC-Ppa-095524	Physcomitrella patens	82.35	5.00e-39	150.00
IUUC-Pfo-097061	Poecilia formosa	90.24	4.00e-41	157.00
IUUC-Pab-098717	Pongo abelii	87.80	3.00e-38	147.00
IUUC-Ppe-101618	Prunus persica	84.34	3.00e-38	148.00
IUUC-Rno-104980	Rattus norvegicus	91.46	3.00e-41	157.00
IUUC-Smo-109095	Selaginella moellendorffii	85.00	6.00e-38	147.00
IUUC-Sit-110509	Setaria italica	86.42	2.00e-37	145.00
IUUC-Sly-110926	Solanum lycopersicum	86.42	5.00e-38	147.00
IUUC-Stu-112759	Solanum tuberosum	86.42	6.00e-38	147.00
IUUC-Sbi-114543	Sorghum bicolor	85.19	2.00e-37	145.00
IUUC-Ssc-116296	Sus scrofa	92.06	6.00e-31	123.00
IUUC-Tgu-117443	Taeniopygia guttata	90.24	6.00e-41	156.00
IUUC-Tru-117917	Takifugu rubripes	88.10	2.00e-39	152.00
IUUC-Tca-121412	Theobroma cacao	84.52	1.00e-38	149.00
IUUC-Tre-122096	Trichoderma reesei	41.67	2.50e+00	24.60
IUUC-Tae-123384	Triticum aestivum	76.34	1.00e-37	145.00
IUUC-Vpa-130061	Vicugna pacos	92.06	6.00e-31	123.00
IUUC-Vvi-131618	Vitis vinifera	85.71	4.00e-39	150.00
IUUC-Xtr-132556	Xenopus tropicalis	90.24	1.00e-40	155.00
IUUC-Xma-133325	Xiphophorus maculatus	89.02	2.00e-40	154.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence