iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000029442.18	ENSMUST00000121964.7	ENSMUSP00000113309.1
ENSMUSG00000029442.18	ENSMUST00000150155.7	ENSMUSP00000118944.1
ENSMUSG00000029442.18	ENSMUST00000069311.4	ENSMUSP00000069782.4
ENSMUSG00000029442.18	ENSMUST00000163092.7	ENSMUSP00000126995.1
ENSMUSG00000029442.18	ENSMUST00000170536.1	ENSMUSP00000129769.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-06	28.1	757	785

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDl 30
           d v++++  +  +l+++Gs  g ikvWD+
   Q: 757  DAVYAVSChPYqPLIAVGSVCGMIKVWDF 785
           5677777775669***************6 PP

Organism

Mus musculus

Functional Description
(View)

May regulate cilium motility through its role in the assembly of the axonemal radialsQ7Z4T9spokes.

Protein Sequence
(Fasta)

MSDTEENPLE ESRESGEMEE EKEEKKEEEE EEEEGEKEKE EEEEEEKGKE EEKEEEKEEG 60
KEEEKKEEEE EKGKKEEEEE EEEEGKGKEE EKEEEKEEEE KEEEKEKEEE EEEEGKGKEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCTTGGT TGGCAACCGT CACTAGGGAG TATGGACAGG AGCCCCTGGA GGTCTCTTGG 60
GATTTCCCGA GGCTGGACGA CCCAAGGCTT TTGAGAAAAG AAGTGGGAGC GTCCCTGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011992--EF-hand-dom_pair
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002305	Ailuropoda melanoleuca	78.69	0.00e+00	1611.00
IUUC-Apl-003833	Anas platyrhynchos	54.69	0.00e+00	977.00
IUUC-Ame-011318	Astyanax mexicanus	48.98	0.00e+00	879.00
IUUC-Bta-013319	Bos taurus	80.04	0.00e+00	1565.00
IUUC-Cja-019874	Callithrix jacchus	77.16	0.00e+00	1608.00
IUUC-Cfa-021224	Canis familiaris	78.12	0.00e+00	1615.00
IUUC-Cpo-022038	Cavia porcellus	68.08	0.00e+00	1321.00
IUUC-Cre-022950	Chlamydomonas reinhardtii	28.29	1.00e-60	228.00
IUUC-Csa-024266	Chlorocebus sabaeus	78.60	0.00e+00	1533.00
IUUC-Cin-025361	Ciona intestinalis	43.86	0.00e+00	821.00
IUUC-Csv-026051	Ciona savignyi	42.87	0.00e+00	785.00
IUUC-Dre-028130	Danio rerio	45.87	0.00e+00	880.00
IUUC-Dno-029069	Dasypus novemcinctus	76.72	0.00e+00	1099.00
IUUC-Ete-032698	Echinops telfairi	66.53	0.00e+00	702.00
IUUC-Eca-033728	Equus caballus	80.37	0.00e+00	1589.00
IUUC-Eeu-034707	Erinaceus europaeus	81.23	3.00e-137	483.00
IUUC-Fca-035974	Felis catus	78.59	0.00e+00	1568.00
IUUC-Fal-037073	Ficedula albicollis	51.23	0.00e+00	963.00
IUUC-Gmo-039607	Gadus morhua	47.89	3.00e-147	515.00
IUUC-Gga-040440	Gallus gallus	53.23	0.00e+00	981.00
IUUC-Gac-042234	Gasterosteus aculeatus	44.19	0.00e+00	773.00
IUUC-Ggo-044473	Gorilla gorilla	84.56	0.00e+00	1040.00
IUUC-Hsa-046770	Homo sapiens	78.94	0.00e+00	1630.00
IUUC-Itr-049034	Ictidomys tridecemlineatus	76.39	0.00e+00	1501.00
IUUC-Lch-049489	Latimeria chalumnae	47.16	0.00e+00	880.00
IUUC-Loc-052793	Lepisosteus oculatus	53.13	0.00e+00	1009.00
IUUC-Laf-054246	Loxodonta africana	78.88	0.00e+00	744.00
IUUC-Mcc-054827	Macaca mulatta	77.37	0.00e+00	1563.00
IUUC-Meu-056344	Macropus eugenii	61.48	0.00e+00	882.00
IUUC-Mga-059830	Meleagris gallopavo	52.95	0.00e+00	965.00
IUUC-Mmr-061157	Microcebus murinus	76.93	0.00e+00	1570.00
IUUC-Mdo-062870	Monodelphis domestica	66.27	0.00e+00	1318.00
IUUC-Mpu-066432	Mustela putorius furo	80.10	0.00e+00	1588.00
IUUC-Mlu-068011	Myotis lucifugus	73.72	0.00e+00	1429.00
IUUC-Nle-069572	Nomascus leucogenys	71.46	0.00e+00	1467.00
IUUC-Opr-070235	Ochotona princeps	78.71	0.00e+00	1456.00
IUUC-Oan-073735	Ornithorhynchus anatinus	65.35	0.00e+00	1254.00
IUUC-Ocu-074669	Oryctolagus cuniculus	76.83	0.00e+00	1481.00
IUUC-Oga-089007	Otolemur garnettii	79.52	0.00e+00	1616.00
IUUC-Ptr-091286	Pan troglodytes	78.74	0.00e+00	1630.00
IUUC-Pan-091905	Papio anubis	78.88	0.00e+00	1609.00
IUUC-Psi-093555	Pelodiscus sinensis	56.26	0.00e+00	1047.00
IUUC-Pma-094736	Petromyzon marinus	36.62	0.00e+00	647.00
IUUC-Pfo-097081	Poecilia formosa	41.82	0.00e+00	751.00
IUUC-Pab-097893	Pongo abelii	77.51	0.00e+00	1591.00
IUUC-Rno-105786	Rattus norvegicus	85.53	0.00e+00	1760.00
IUUC-Sha-107399	Sarcophilus harrisii	65.00	0.00e+00	1287.00
IUUC-Tgu-116796	Taeniopygia guttata	53.49	0.00e+00	1004.00
IUUC-Tru-118592	Takifugu rubripes	43.48	0.00e+00	729.00
IUUC-Tni-120456	Tetraodon nigroviridis	40.47	0.00e+00	676.00
IUUC-Tbe-127411	Tupaia belangeri	74.19	1.00e-91	331.00
IUUC-Xtr-131990	Xenopus tropicalis	51.90	0.00e+00	986.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence