iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-020910

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03004255

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000013699.3	ENSCAFT00000021745.3	ENSCAFP00000020197.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-06	29.2	407	438

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           H+  +  l+f  +  t+l ++s+D+ i +WDl
   Q: 407  HKKAIATLCFspTHeTHLFTASYDKRIILWDL 438
           88889999***6447****************7 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

YGPNRTPVPT TGQRGPLLLA MGPLSARLLM QRGRPKSDRL GKIRSLDLSG LKLLSEHLDP 60
KLLSRLKQLQ ELDLSNNQLE TLPANLGLSH LRVLRCANNQ LGDVTALCQF PQLEELSLEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACGGACCCA ACCGGACGCC GGTGCCAACG ACCGGCCAGC GCGGGCCGCT CCTCCTCGCC 60
ATGGGGCCCC TCTCGGCGCG GCTCCTCATG CAGCGGGGGC GTCCCAAGAG CGACCGGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005664--C:nuclear origin of replication recognition complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005721--C:pericentric heterochromatin
GO:0031933--C:telomeric heterochromatin
GO:0003682--F:chromatin binding
GO:0008327--F:methyl-CpG binding
GO:0006325--P:chromatin organization
GO:0071169--P:establishment of protein localization to chromatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001948	Ailuropoda melanoleuca	87.50	0.00e+00	696.00
IUUC-Bta-012858	Bos taurus	81.64	0.00e+00	1034.00
IUUC-Cja-019702	Callithrix jacchus	87.69	0.00e+00	1042.00
IUUC-Cpo-022523	Cavia porcellus	80.28	0.00e+00	1053.00
IUUC-Csa-023359	Chlorocebus sabaeus	87.69	0.00e+00	1079.00
IUUC-Dno-029426	Dasypus novemcinctus	89.38	0.00e+00	1072.00
IUUC-Dor-030654	Dipodomys ordii	79.78	0.00e+00	816.00
IUUC-Eca-034035	Equus caballus	89.94	0.00e+00	1098.00
IUUC-Eeu-034711	Erinaceus europaeus	77.64	4.00e-169	588.00
IUUC-Gmo-039096	Gadus morhua	38.35	5.00e-76	278.00
IUUC-Ggo-044714	Gorilla gorilla	87.23	0.00e+00	1045.00
IUUC-Hsa-046826	Homo sapiens	87.38	0.00e+00	1046.00
IUUC-Laf-054449	Loxodonta africana	87.08	0.00e+00	1054.00
IUUC-Mcc-055193	Macaca mulatta	88.15	0.00e+00	1048.00
IUUC-Mmr-061572	Microcebus murinus	87.86	0.00e+00	1098.00
IUUC-Mmu-063240	Mus musculus	77.38	0.00e+00	947.00
IUUC-Mpu-066295	Mustela putorius furo	91.63	0.00e+00	1161.00
IUUC-Mlu-067766	Myotis lucifugus	87.40	0.00e+00	1093.00
IUUC-Nle-069200	Nomascus leucogenys	85.23	0.00e+00	973.00
IUUC-Ola-086965	Oryzias latipes	41.61	2.00e-84	306.00
IUUC-Oga-088411	Otolemur garnettii	80.40	0.00e+00	1039.00
IUUC-Oar-089415	Ovis aries	83.94	0.00e+00	1001.00
IUUC-Ptr-090663	Pan troglodytes	87.38	0.00e+00	1046.00
IUUC-Pan-092467	Papio anubis	87.12	0.00e+00	1026.00
IUUC-Pab-098479	Pongo abelii	87.38	0.00e+00	1048.00
IUUC-Pca-101023	Procavia capensis	75.85	0.00e+00	871.00
IUUC-Pva-102812	Pteropus vampyrus	85.08	0.00e+00	1061.00
IUUC-Rno-105469	Rattus norvegicus	78.27	0.00e+00	975.00
IUUC-Ssc-115884	Sus scrofa	89.83	0.00e+00	1124.00
IUUC-Tbe-127247	Tupaia belangeri	87.33	1.00e-132	466.00
IUUC-Ttr-128723	Tursiops truncatus	88.77	0.00e+00	1092.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence