iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131941

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat domain 59

Genbank Nucleotide ID

AAMC01003496

Gene Name

wdr59

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000007677.3	ENSXETT00000016714.3	ENSXETP00000016714.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-16	59.0	190	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtg 33
           H  ++++l++ +d   +l+++s D+++k WD r+ 
   Q: 190  HLYKIHGLDWhPDseYILATSSQDNSVKFWDSRQP 224
           8889*******7774567*************8775 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MAAHWSSENV VVEFRDSQAT AMSVDCQGQL AVLSGRRFLY IVNLETPTDG HRKISRQSKW 60
DIGTVQWNPH ESYAHFFAAS SNQRVDLYQW KDGTGDINTS LQGHTRVISD LDWSVFEPDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCTC ACTGGAGCAG CGAGAACGTG GTGGTAGAAT TTCGGGATTC GCAGGTGAGT 60
GGAATAAATG CAGGAGCTGT GGGTTCACTG CAAATATCGA GCGCTCTAAT CTGAACAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50908--RWD
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00591--RWD
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002149	Ailuropoda melanoleuca	80.82	0.00e+00	1609.00
IUUC-Apl-004021	Anas platyrhynchos	80.50	0.00e+00	1538.00
IUUC-Aca-004977	Anolis carolinensis	78.48	0.00e+00	1604.00
IUUC-Ago-007961	Ashbya gossypii	28.08	3.00e-53	204.00
IUUC-Acl-008161	Aspergillus clavatus	33.94	3.00e-49	191.00
IUUC-Afl-008686	Aspergillus flavus	27.54	2.00e-56	214.00
IUUC-Afu-008932	Aspergillus fumigatus	28.38	4.00e-55	210.00
IUUC-Ani-009493	Aspergillus nidulans	29.09	2.00e-59	224.00
IUUC-Ang-009876	Aspergillus niger	28.10	1.00e-55	212.00
IUUC-Aor-009926	Aspergillus oryzae	27.54	2.00e-56	214.00
IUUC-Ate-010274	Aspergillus terreus	26.94	8.00e-53	202.00
IUUC-Ame-011297	Astyanax mexicanus	68.48	0.00e+00	1354.00
IUUC-Bgr-012173	Blumeria graminis	31.48	3.00e-44	174.00
IUUC-Bta-013261	Bos taurus	81.64	0.00e+00	1630.00
IUUC-Bci-013971	Botrytis cinerea	32.82	1.00e-44	176.00
IUUC-Cja-019167	Callithrix jacchus	80.00	0.00e+00	1598.00
IUUC-Cfa-020287	Canis familiaris	81.03	0.00e+00	1610.00
IUUC-Cpo-022510	Cavia porcellus	78.79	0.00e+00	1523.00
IUUC-Csa-023474	Chlorocebus sabaeus	79.68	0.00e+00	1627.00
IUUC-Cho-024634	Choloepus hoffmanni	76.47	0.00e+00	662.00
IUUC-Cin-025642	Ciona intestinalis	32.97	4.00e-134	472.00
IUUC-Csv-025848	Ciona savignyi	45.63	5.00e-56	210.00
IUUC-Cgl-026531	Colletotrichum gloeosporioides	32.00	2.00e-44	174.00
IUUC-Cne-027088	Cryptococcus neoformans	30.41	2.00e-43	171.00
IUUC-Dre-028753	Danio rerio	69.80	0.00e+00	1362.00
IUUC-Dno-029733	Dasypus novemcinctus	79.61	0.00e+00	1580.00
IUUC-Dor-030781	Dipodomys ordii	82.62	0.00e+00	825.00
IUUC-Dme-031803	Drosophila melanogaster	33.98	4.00e-148	518.00
IUUC-Ete-032622	Echinops telfairi	73.44	0.00e+00	1426.00
IUUC-Eca-033344	Equus caballus	81.54	0.00e+00	1611.00
IUUC-Eeu-034523	Erinaceus europaeus	72.41	0.00e+00	1380.00
IUUC-Fca-035650	Felis catus	81.23	0.00e+00	1622.00
IUUC-Fal-037404	Ficedula albicollis	80.56	0.00e+00	1584.00
IUUC-Fox-037955	Fusarium oxysporum	33.81	3.00e-42	167.00
IUUC-Fso-038289	Fusarium solani	33.23	2.00e-45	177.00
IUUC-Gmo-038547	Gadus morhua	66.63	0.00e+00	1358.00
IUUC-Ggr-039858	Gaeumannomyces graminis	37.23	2.00e-43	171.00
IUUC-Gga-041030	Gallus gallus	81.21	0.00e+00	1590.00
IUUC-Gac-042581	Gasterosteus aculeatus	68.71	0.00e+00	1390.00
IUUC-Ggo-044641	Gorilla gorilla	81.13	0.00e+00	1622.00
IUUC-Hsa-046134	Homo sapiens	81.33	0.00e+00	1623.00
IUUC-Itr-048551	Ictidomys tridecemlineatus	79.40	0.00e+00	628.00
IUUC-Kpa-049091	Komagataella pastoris	25.83	3.00e-44	174.00
IUUC-Lch-050288	Latimeria chalumnae	71.31	0.00e+00	1397.00
IUUC-Loc-052802	Lepisosteus oculatus	72.13	0.00e+00	1435.00
IUUC-Lma-053296	Leptosphaeria maculans	33.02	6.00e-47	183.00
IUUC-Laf-053997	Loxodonta africana	79.88	0.00e+00	1646.00
IUUC-Mcc-055855	Macaca mulatta	81.23	0.00e+00	1609.00
IUUC-Meu-056898	Macropus eugenii	79.55	7.00e-175	607.00
IUUC-Mor-056913	Magnaporthe oryzae	36.07	6.00e-43	170.00
IUUC-Mpo-057612	Magnaporthe poae	37.59	6.00e-44	172.00
IUUC-Mla-059097	Melampsora laricipopulina	32.93	1.00e-48	188.00
IUUC-Mga-059218	Meleagris gallopavo	81.09	0.00e+00	1562.00
IUUC-Mvi-060251	Microbotryum violaceum	31.85	7.00e-48	186.00
IUUC-Mmr-061093	Microcebus murinus	79.36	0.00e+00	1566.00
IUUC-Mdo-062757	Monodelphis domestica	79.45	0.00e+00	1562.00
IUUC-Mmu-063839	Mus musculus	79.98	0.00e+00	1642.00
IUUC-Mpu-065977	Mustela putorius furo	81.23	0.00e+00	1619.00
IUUC-Mlu-067460	Myotis lucifugus	79.90	0.00e+00	1617.00
IUUC-Nfi-068250	Neosartorya fischeri	28.28	2.00e-55	211.00
IUUC-Ncr-068710	Neurospora crassa	32.11	1.00e-44	176.00
IUUC-Nle-070011	Nomascus leucogenys	80.92	0.00e+00	1615.00
IUUC-Opr-070731	Ochotona princeps	75.90	0.00e+00	1470.00
IUUC-Ont-072165	Oreochromis niloticus	69.14	0.00e+00	1388.00
IUUC-Oan-072887	Ornithorhynchus anatinus	79.31	0.00e+00	1622.00
IUUC-Ocu-073926	Oryctolagus cuniculus	78.87	0.00e+00	1474.00
IUUC-Ola-087111	Oryzias latipes	66.77	0.00e+00	1324.00
IUUC-Oga-088850	Otolemur garnettii	81.54	0.00e+00	1621.00
IUUC-Oar-090291	Ovis aries	81.54	0.00e+00	1626.00
IUUC-Ptr-091044	Pan troglodytes	81.03	0.00e+00	1612.00
IUUC-Pan-092374	Papio anubis	79.78	0.00e+00	1627.00
IUUC-Psi-093170	Pelodiscus sinensis	53.16	0.00e+00	890.00
IUUC-Pma-094544	Petromyzon marinus	66.52	1.00e-173	602.00
IUUC-Pno-095068	Phaeosphaeria nodorum	31.16	2.00e-43	171.00
IUUC-Pfo-096480	Poecilia formosa	68.03	0.00e+00	1320.00
IUUC-Pab-098134	Pongo abelii	80.02	0.00e+00	1579.00
IUUC-Pca-100763	Procavia capensis	63.44	0.00e+00	840.00
IUUC-Pva-102544	Pteropus vampyrus	80.72	0.00e+00	1620.00
IUUC-Pgr-103257	Puccinia graminis	33.24	5.00e-51	196.00
IUUC-Ptt-103942	Puccinia triticina	31.90	6.00e-47	182.00
IUUC-Pte-104065	Pyrenophora teres	32.20	2.00e-44	175.00
IUUC-Rno-105468	Rattus norvegicus	78.24	0.00e+00	1478.00
IUUC-Sce-106356	Saccharomyces cerevisiae	28.10	3.00e-55	210.00
IUUC-Sha-106662	Sarcophilus harrisii	81.65	0.00e+00	1597.00
IUUC-Sja-107973	Schizosaccharomyces japonicus	27.25	3.00e-69	257.00
IUUC-Spo-108265	Schizosaccharomyces pombe	25.92	3.00e-68	254.00
IUUC-Ssl-108662	Sclerotinia sclerotiorum	33.44	1.00e-43	172.00
IUUC-Sar-113525	Sorex araneus	76.61	0.00e+00	873.00
IUUC-Sre-115163	Sporisorium reilianum	37.25	1.00e-39	159.00
IUUC-Ssc-115381	Sus scrofa	82.47	0.00e+00	885.00
IUUC-Tgu-116525	Taeniopygia guttata	77.64	0.00e+00	1529.00
IUUC-Tru-118432	Takifugu rubripes	68.07	0.00e+00	1376.00
IUUC-Tsy-119306	Tarsius syrichta	65.43	0.00e+00	1010.00
IUUC-Tni-120757	Tetraodon nigroviridis	66.53	0.00e+00	1336.00
IUUC-Tre-122187	Trichoderma reesei	33.92	3.00e-48	187.00
IUUC-Tvi-122367	Trichoderma virens	33.92	2.00e-47	185.00
IUUC-Tme-126986	Tuber melanosporum	25.73	5.00e-60	226.00
IUUC-Tbe-127800	Tupaia belangeri	67.77	0.00e+00	1129.00
IUUC-Ttr-129154	Tursiops truncatus	73.04	0.00e+00	1409.00
IUUC-Uma-129366	Ustilago maydis	35.42	9.00e-40	159.00
IUUC-Vda-129827	Verticillium dahliae	33.44	5.00e-47	183.00
IUUC-Vpa-130493	Vicugna pacos	81.19	0.00e+00	1575.00
IUUC-Xma-133903	Xiphophorus maculatus	69.10	0.00e+00	1369.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence