iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0030s00210	POPTR_0030s00210.2	POPTR_0030s00210.2
POPTR_0030s00210	POPTR_0030s00210.1	POPTR_0030s00210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-23	81.2	216	251
UBD/Beta-Prp	5.00e-44	151.8	48	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++sv++la  ++ t+lvsG+  ++++vWD+rtg 
   Q: 216  GHKESVYALAMnDSgTRLVSGGTEKVVRVWDPRTGS 251
           8**********7336******************996 PP

UBD/Beta-Prp

   S: 146  hpdg.nllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfs. 231
            +dg ++l++Gs D+t++ W l   ++++  t+++ h d v+   +  + + lvs+s d+t+k w++   g+c +tl+ h+d v ++++  
   Q: 48   VSDGrDYLFTGSRDGTLKRWALseDSATCSATFES-HVDWVNDAVLAGD-RTLVSCSSDTTLKAWNCLsDGTCTKTLRQHSDYVICLAAAe 136
           44556889999999999999887778889999988.9999999988887.58999999999999998768899999999999998888887 PP
   S: 232  pnderlvsgssDgsiriWdlrs 253
           +n++ ++sg+  g ++iWd++ 
   Q: 137  KNSNVVASGGLGGEVFIWDVEA 158
           8888899999999999996553 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MHRVGSAGNT NNSVRPRKEK RLTYVLSDAD DTKHCAGINC LKVLKSTVSD GRDYLFTGSR 60
DGTLKRWALS EDSATCSATF ESHVDWVNDA VLAGDRTLVS CSSDTTLKAW NCLSDGTCTK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACACACAC ACACACTCTC TCTCTCTAAA ACAAACAACA AATCATCATC ATCATCATAA 60
AAACAATCGC TCCATCCTTT CTAGGGTTTT AATTTAAAAC TCTCAGAAAT CAAATCCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR003591--Leu-rich_rpt_typical-subtyp

Pfam

PF13855--LRR_8

SMART

SM00369--LRR_TYP

KEGG

pop:POPTR_0013s03530g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001533	Ailuropoda melanoleuca	32.81	1.00e-92	333.00
IUUC-Apl-003709	Anas platyrhynchos	35.92	6.00e-53	200.00
IUUC-Aca-004875	Anolis carolinensis	33.07	5.00e-95	341.00
IUUC-Ame-010875	Astyanax mexicanus	33.82	6.00e-85	308.00
IUUC-Bta-013379	Bos taurus	32.94	2.00e-93	336.00
IUUC-Cja-018804	Callithrix jacchus	32.81	3.00e-93	335.00
IUUC-Cfa-020076	Canis familiaris	32.94	2.00e-93	336.00
IUUC-Cpo-021721	Cavia porcellus	33.47	1.00e-92	333.00
IUUC-Csa-023188	Chlorocebus sabaeus	32.94	2.00e-93	336.00
IUUC-Dre-027926	Danio rerio	32.73	2.00e-92	332.00
IUUC-Dme-032168	Drosophila melanogaster	28.81	1.00e-71	263.00
IUUC-Eca-034028	Equus caballus	33.07	7.00e-94	337.00
IUUC-Fca-035619	Felis catus	36.04	6.00e-80	291.00
IUUC-Fal-036869	Ficedula albicollis	33.11	4.00e-93	335.00
IUUC-Gmo-038627	Gadus morhua	32.72	2.00e-93	336.00
IUUC-Gga-040555	Gallus gallus	33.07	6.00e-95	341.00
IUUC-Gac-042497	Gasterosteus aculeatus	32.59	4.00e-93	335.00
IUUC-Ggo-045561	Gorilla gorilla	32.94	2.00e-93	336.00
IUUC-Hsa-045710	Homo sapiens	32.94	2.00e-93	336.00
IUUC-Lch-049507	Latimeria chalumnae	32.86	6.00e-93	334.00
IUUC-Laf-053706	Loxodonta africana	33.11	8.00e-93	333.00
IUUC-Mcc-055046	Macaca mulatta	32.94	2.00e-93	336.00
IUUC-Mga-059297	Meleagris gallopavo	33.07	6.00e-95	341.00
IUUC-Mdo-062762	Monodelphis domestica	33.16	9.00e-96	343.00
IUUC-Mmu-063915	Mus musculus	33.20	9.00e-96	343.00
IUUC-Mpu-065999	Mustela putorius furo	36.29	2.00e-76	278.00
IUUC-Mlu-068226	Myotis lucifugus	32.94	3.00e-93	335.00
IUUC-Nle-069416	Nomascus leucogenys	32.94	2.00e-93	336.00
IUUC-Opr-070515	Ochotona princeps	31.64	2.00e-83	302.00
IUUC-Ont-072052	Oreochromis niloticus	31.46	4.00e-88	318.00
IUUC-Oan-073636	Ornithorhynchus anatinus	33.56	5.00e-94	338.00
IUUC-Ocu-074799	Oryctolagus cuniculus	32.94	1.00e-93	336.00
IUUC-Ola-087546	Oryzias latipes	32.55	2.00e-93	336.00
IUUC-Oga-087998	Otolemur garnettii	33.29	9.00e-93	333.00
IUUC-Oar-090303	Ovis aries	32.94	2.00e-93	336.00
IUUC-Ptr-090588	Pan troglodytes	32.94	2.00e-93	336.00
IUUC-Pan-092722	Papio anubis	32.94	2.00e-93	336.00
IUUC-Psi-093911	Pelodiscus sinensis	32.68	4.00e-95	342.00
IUUC-Pma-094580	Petromyzon marinus	33.02	3.00e-95	342.00
IUUC-Pab-097586	Pongo abelii	32.94	2.00e-93	336.00
IUUC-Pva-102698	Pteropus vampyrus	31.55	7.00e-93	334.00
IUUC-Rno-104978	Rattus norvegicus	33.02	7.00e-94	337.00
IUUC-Sha-107079	Sarcophilus harrisii	34.32	2.00e-88	319.00
IUUC-Sar-113408	Sorex araneus	35.41	8.00e-65	241.00
IUUC-Ssc-115434	Sus scrofa	32.94	2.00e-93	336.00
IUUC-Tgu-116517	Taeniopygia guttata	32.94	2.00e-94	339.00
IUUC-Tru-118174	Takifugu rubripes	32.86	6.00e-94	337.00
IUUC-Tsy-118935	Tarsius syrichta	32.68	1.00e-93	337.00
IUUC-Tni-119744	Tetraodon nigroviridis	32.46	5.00e-92	331.00
IUUC-Ttr-129153	Tursiops truncatus	33.33	4.00e-96	345.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence