iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000784

Ensembl Protein ID

EMT10888

UniProt Accession

M8C6Y1; M8C6Y1_AEGTA

Genbank Protein ID

EMT10888.1

Protein Name

WD repeat-containing 3-like protein

Genbank Nucleotide ID

KD556778

Gene Name

F775_22053

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_22053	EMT10888	EMT10888

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-45	151.8	84	122
UBD/Beta-Prp	9.60e-88	295.0	54	365

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f  s++ lv++s D+ i+vWDl+t+++l+
   Q: 84   GHRDQVTDLLFldSGKKLVTCSKDKFIRVWDLDTQHCLQ 122
           8*********995559*********************97 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirv 120
           p++ +la+gs+d  +++wdv  +  l +l gh ++vt++ f ++gk lvt+s+D++i+vwdl+t  c++++ gh ++++s++++ps ++lvsGs+d  +rv
   Q: 54   PSGAVLASGSKDCDVILWDVVAQAGLFRLRGHRDQVTDLLFLDSGKKLVTCSKDKFIRVWDLDTQHCLQIVGGHHSEIWSMDVDPSEKFLVSGSADPELRV 154
           57899************************************************************************************************ PP
   S: 121  wdletgqclee.............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.......................................... 166
           + +++  +  e             + ++ ++ ++++++++dg+l++   + +t  ++++                                          
   Q: 155  FRIRQSAEEGEdwnkwdalklfgeIPRQSKERIQTIRFNKDGSLVACQVAGKTADIYRIldeteatrkakrrlhrkkekasakaaaaegngsvidpspaqd 255
           ***999999989****************************************************7777777777777777777777777777777777777 PP
   S: 167  .........ktgkllrtltgghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgec....vrtlnghtdnvksvrfspnderlvsgssDgsiri 248
                       kll+ l+    +++ s++f+++         l    +++ ++ +++ ++++     ++ +gh++ ++s+++ ++d++l+s+s ++ ++i
   Q: 256  sqnptvvvtDVFKLLQVLR--TSKKICSVAFSPSNppkgclATLSLSLNNNVLETYSVDNEKVskmySVEIHGHRSDIRSLALNSEDNLLMSTS-HNAVKI 353
           7665555544444444444..36667777777777**9887777777789999******666655559999**********************8.9***** PP
   S: 249  Wdlrsgdllktl 260
           W+  +gd+l+t+
   Q: 354  WNPSTGDCLRTV 365
           *********986 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MVKAYLRYEP ALSFGVVASG HADGSIRLWD TESGACEATL HGHRSAASAL RFAPSGAVLA 60
SGSKDCDVIL WDVVAQAGLF RLRGHRDQVT DLLFLDSGKK LVTCSKDKFI RVWDLDTQHC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGG CCTACCTCCG CTACGAGCCG GCGCTCTCCT TCGGCGTGGT TGCGGCGTGG 60
GCCCCCCCCC GGAGTCCACC GTCGTCTCCC CCCCCCCCGC CCCCCGCCCC CTCGCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

KEGG

ats:F775_22053

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001245	Ailuropoda melanoleuca	37.58	4.00e-155	541.00
IUUC-Atr-002700	Amborella trichopoda	57.74	0.00e+00	932.00
IUUC-Apl-004164	Anas platyrhynchos	41.02	8.00e-136	476.00
IUUC-Aca-004765	Anolis carolinensis	38.11	2.00e-158	552.00
IUUC-Aly-006503	Arabidopsis lyrata	58.43	0.00e+00	963.00
IUUC-Ath-006848	Arabidopsis thaliana	59.36	0.00e+00	989.00
IUUC-Ago-007909	Ashbya gossypii	34.07	1.00e-133	469.00
IUUC-Acl-008238	Aspergillus clavatus	37.74	2.00e-147	516.00
IUUC-Afl-008544	Aspergillus flavus	37.86	3.00e-143	501.00
IUUC-Afu-008868	Aspergillus fumigatus	37.92	4.00e-146	511.00
IUUC-Ani-009367	Aspergillus nidulans	37.44	6.00e-144	504.00
IUUC-Ang-009732	Aspergillus niger	38.04	6.00e-150	524.00
IUUC-Aor-010140	Aspergillus oryzae	37.86	3.00e-143	502.00
IUUC-Ate-010572	Aspergillus terreus	37.10	2.00e-143	503.00
IUUC-Ame-010956	Astyanax mexicanus	42.46	1.00e-115	410.00
IUUC-Bgr-012296	Blumeria graminis	35.86	7.00e-143	500.00
IUUC-Bta-012716	Bos taurus	38.61	3.00e-159	555.00
IUUC-Bci-013699	Botrytis cinerea	35.77	1.00e-140	493.00
IUUC-Bdi-014525	Brachypodium distachyon	89.81	0.00e+00	1457.00
IUUC-Bol-015117	Brassica oleracea	59.03	0.00e+00	944.00
IUUC-Bra-016869	Brassica rapa	58.69	0.00e+00	946.00
IUUC-Cel-018570	Caenorhabditis elegans	31.01	1.00e-87	317.00
IUUC-Cja-019425	Callithrix jacchus	38.52	9.00e-158	550.00
IUUC-Cfa-020787	Canis familiaris	38.17	1.00e-154	540.00
IUUC-Cpo-021729	Cavia porcellus	40.09	3.00e-127	448.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	45.05	1.00e-108	387.00
IUUC-Csa-024098	Chlorocebus sabaeus	39.59	1.00e-161	563.00
IUUC-Cho-024495	Choloepus hoffmanni	37.96	8.00e-88	317.00
IUUC-Cin-025245	Ciona intestinalis	33.91	1.00e-98	352.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	36.15	5.00e-136	478.00
IUUC-Cne-026835	Cryptococcus neoformans	38.61	1.00e-102	367.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.32	4.00e-39	156.00
IUUC-Dre-027874	Danio rerio	39.64	5.00e-160	557.00
IUUC-Dno-028905	Dasypus novemcinctus	39.18	2.00e-160	558.00
IUUC-Dor-030383	Dipodomys ordii	33.91	3.00e-58	219.00
IUUC-Dse-031297	Dothistroma septosporum	34.92	5.00e-132	464.00
IUUC-Dme-031956	Drosophila melanogaster	31.81	1.00e-113	403.00
IUUC-Ete-032608	Echinops telfairi	36.93	3.00e-94	338.00
IUUC-Eca-034181	Equus caballus	39.52	3.00e-158	551.00
IUUC-Eeu-034495	Erinaceus europaeus	40.56	1.00e-152	533.00
IUUC-Fca-035994	Felis catus	39.70	5.00e-151	527.00
IUUC-Fal-036611	Ficedula albicollis	42.88	1.00e-121	430.00
IUUC-Fox-037807	Fusarium oxysporum	35.41	1.00e-139	489.00
IUUC-Fso-038090	Fusarium solani	35.57	1.00e-137	483.00
IUUC-Gmo-039018	Gadus morhua	34.41	3.00e-75	275.00
IUUC-Ggr-039748	Gaeumannomyces graminis	34.96	7.00e-139	487.00
IUUC-Gga-040707	Gallus gallus	42.57	2.00e-122	432.00
IUUC-Gac-042334	Gasterosteus aculeatus	33.05	2.00e-63	236.00
IUUC-Gma-043860	Glycine max	61.41	0.00e+00	969.00
IUUC-Ggo-045334	Gorilla gorilla	38.98	8.00e-158	550.00
IUUC-Hsa-046996	Homo sapiens	38.95	7.00e-159	553.00
IUUC-Hvu-047381	Hordeum vulgare	98.53	0.00e+00	909.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	38.89	6.00e-156	544.00
IUUC-Kpa-049185	Komagataella pastoris	35.69	6.00e-129	454.00
IUUC-Lch-050098	Latimeria chalumnae	38.46	5.00e-134	471.00
IUUC-Lpe-050710	Leersia perrieri	82.60	0.00e+00	1337.00
IUUC-Loc-052745	Lepisosteus oculatus	36.50	1.00e-143	503.00
IUUC-Lma-053104	Leptosphaeria maculans	35.87	7.00e-145	508.00
IUUC-Laf-054395	Loxodonta africana	39.69	4.00e-160	558.00
IUUC-Mcc-055077	Macaca mulatta	39.14	2.00e-159	555.00
IUUC-Meu-056418	Macropus eugenii	41.15	2.00e-90	326.00
IUUC-Mor-057031	Magnaporthe oryzae	35.68	7.00e-128	451.00
IUUC-Mpo-057420	Magnaporthe poae	35.33	7.00e-135	474.00
IUUC-Mtr-057838	Medicago truncatula	59.91	0.00e+00	999.00
IUUC-Mla-058854	Melampsora laricipopulina	34.07	2.00e-122	433.00
IUUC-Mga-060120	Meleagris gallopavo	39.39	4.00e-122	431.00
IUUC-Mvi-060407	Microbotryum violaceum	40.49	2.00e-118	420.00
IUUC-Mmr-060635	Microcebus murinus	38.98	1.00e-159	556.00
IUUC-Mdo-063023	Monodelphis domestica	38.76	1.00e-159	556.00
IUUC-Mmu-064103	Mus musculus	39.12	3.00e-162	565.00
IUUC-Mac-065569	Musa acuminata	70.45	0.00e+00	1189.00
IUUC-Mpu-066462	Mustela putorius furo	38.54	3.00e-156	545.00
IUUC-Mlu-067894	Myotis lucifugus	38.27	3.00e-154	538.00
IUUC-Nfi-068321	Neosartorya fischeri	38.15	6.00e-146	510.00
IUUC-Ncr-068661	Neurospora crassa	35.12	1.00e-139	490.00
IUUC-Nle-069409	Nomascus leucogenys	39.29	3.00e-160	558.00
IUUC-Opr-070445	Ochotona princeps	40.14	4.00e-116	412.00
IUUC-Ont-072339	Oreochromis niloticus	37.41	6.00e-153	534.00
IUUC-Oan-073688	Ornithorhynchus anatinus	38.90	2.00e-149	523.00
IUUC-Ocu-074227	Oryctolagus cuniculus	38.95	2.00e-158	552.00
IUUC-Oba-075635	Oryza barthii	82.21	0.00e+00	1293.00
IUUC-Obr-076897	Oryza brachyantha	81.48	0.00e+00	1332.00
IUUC-Ogl-077555	Oryza glaberrima	82.09	0.00e+00	1292.00
IUUC-Ogu-078724	Oryza glumaepatula	81.98	0.00e+00	1291.00
IUUC-Oin-080030	Oryza indica	81.98	0.00e+00	1288.00
IUUC-Olo-080687	Oryza longistaminata	79.75	0.00e+00	1282.00
IUUC-Ome-081867	Oryza meridionalis	82.09	0.00e+00	1291.00
IUUC-Oni-082559	Oryza nivara	81.98	0.00e+00	1288.00
IUUC-Opu-083332	Oryza punctata	84.08	0.00e+00	1140.00
IUUC-Oru-084455	Oryza rufipogon	81.86	0.00e+00	1286.00
IUUC-Osa-085793	Oryza sativa	81.86	0.00e+00	1286.00
IUUC-Ola-087395	Oryzias latipes	40.58	3.00e-108	385.00
IUUC-Olu-087768	Ostreococcus lucimarinus	41.81	3.00e-174	604.00
IUUC-Oga-088574	Otolemur garnettii	38.95	2.00e-157	549.00
IUUC-Oar-089453	Ovis aries	38.30	6.00e-159	554.00
IUUC-Ptr-090694	Pan troglodytes	39.07	5.00e-159	554.00
IUUC-Pan-092420	Papio anubis	38.93	1.00e-157	549.00
IUUC-Psi-093683	Pelodiscus sinensis	38.78	2.00e-155	542.00
IUUC-Pma-094197	Petromyzon marinus	47.26	7.00e-36	142.00
IUUC-Pno-094783	Phaeosphaeria nodorum	35.45	2.00e-139	489.00
IUUC-Ppa-095208	Physcomitrella patens	50.45	0.00e+00	756.00
IUUC-Pfo-096299	Poecilia formosa	38.00	7.00e-159	553.00
IUUC-Pab-098706	Pongo abelii	39.45	1.00e-158	553.00
IUUC-Pop-099275	Populus trichocarpa	62.01	0.00e+00	1010.00
IUUC-Pca-100796	Procavia capensis	32.35	3.00e-104	372.00
IUUC-Ppe-101861	Prunus persica	62.54	0.00e+00	1022.00
IUUC-Pva-103241	Pteropus vampyrus	39.87	2.00e-148	519.00
IUUC-Pgr-103432	Puccinia graminis	33.48	5.00e-121	428.00
IUUC-Ptt-103742	Puccinia triticina	37.48	9.00e-107	380.00
IUUC-Pte-104069	Pyrenophora teres	35.82	2.00e-135	476.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	36.05	1.00e-143	503.00
IUUC-Rno-105219	Rattus norvegicus	38.62	6.00e-156	544.00
IUUC-Sce-106271	Saccharomyces cerevisiae	33.98	2.00e-126	446.00
IUUC-Sha-107550	Sarcophilus harrisii	38.02	1.00e-153	536.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	34.58	9.00e-139	486.00
IUUC-Spo-108239	Schizosaccharomyces pombe	34.82	1.00e-144	506.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	35.64	3.00e-144	505.00
IUUC-Smo-109477	Selaginella moellendorffii	51.38	0.00e+00	830.00
IUUC-Sit-110000	Setaria italica	83.39	0.00e+00	1339.00
IUUC-Sly-111595	Solanum lycopersicum	59.39	0.00e+00	936.00
IUUC-Stu-112516	Solanum tuberosum	59.23	0.00e+00	940.00
IUUC-Sar-113195	Sorex araneus	43.49	9.00e-116	410.00
IUUC-Sbi-114465	Sorghum bicolor	80.55	0.00e+00	1332.00
IUUC-Sre-115006	Sporisorium reilianum	34.25	4.00e-125	442.00
IUUC-Ssc-115929	Sus scrofa	38.38	1.00e-156	546.00
IUUC-Tgu-117282	Taeniopygia guttata	42.30	2.00e-118	419.00
IUUC-Tru-118406	Takifugu rubripes	37.15	3.00e-147	515.00
IUUC-Tsy-119170	Tarsius syrichta	39.16	2.00e-154	538.00
IUUC-Tni-119721	Tetraodon nigroviridis	37.34	1.00e-142	499.00
IUUC-Tca-121761	Theobroma cacao	62.46	0.00e+00	1034.00
IUUC-Tre-121908	Trichoderma reesei	35.23	1.00e-138	487.00
IUUC-Tvi-122547	Trichoderma virens	35.76	7.00e-141	494.00
IUUC-Tae-125496	Triticum aestivum	95.42	0.00e+00	1512.00
IUUC-Tur-126811	Triticum urartu	93.08	0.00e+00	1499.00
IUUC-Tme-126987	Tuber melanosporum	37.99	1.00e-155	543.00
IUUC-Tbe-127315	Tupaia belangeri	44.31	1.00e-103	370.00
IUUC-Ttr-129165	Tursiops truncatus	33.15	4.00e-114	405.00
IUUC-Uma-129651	Ustilago maydis	34.25	1.00e-126	447.00
IUUC-Vda-129973	Verticillium dahliae	35.75	4.00e-130	458.00
IUUC-Vpa-130163	Vicugna pacos	32.87	3.00e-59	222.00
IUUC-Vvi-131402	Vitis vinifera	61.20	0.00e+00	1003.00
IUUC-Xtr-132296	Xenopus tropicalis	38.66	2.00e-154	538.00
IUUC-Xma-133028	Xiphophorus maculatus	38.31	8.00e-158	550.00
IUUC-Yli-134484	Yarrowia lipolytica	37.36	1.00e-143	503.00
IUUC-Zma-135938	Zea mays	80.55	0.00e+00	1337.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence