iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067894

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02034371

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000003500.2	ENSMLUT00000003509.2	ENSMLUP00000003192.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-44	146.7	673	703
UBD/Beta-Prp	8.90e-96	320.6	35	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +++cla  ++ +++vs+s+D+++++W+
   Q: 673  GHHQEIWCLAVsPNgDYVVSSSHDKSLRLWE 703
           78899*******777***************8 PP

UBD/Beta-Prp

   S: 64   gkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnll 152
           +  +v +   +++ +wdl++g+ + +l+g +++v++l  sp+g +l++G +d  ir++ l +g+    t++gh+++++++++++ g  l
   Q: 35   KGRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNV-TFNGHKAAITSLKYDQLGGRL 122
           555555566677889***************************************************9.********************* PP
   S: 153  vsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
           +sGs+D+ + +Wd+ +++ l++l+g h+d+++   f ++++ lvs ++d+ vk wdl t++c +t+ gh++ v+ + + ++++rl++g+
   Q: 123  ASGSKDTDIIVWDVINESGLYRLKG-HKDAITQALFLREKNLLVSSGKDTVVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGA 210
           ***********************99.*************************************************************** PP
   S: 242  sDgsiriWdlrsgdllktlql 262
           sD  +r Wd+   + +k l+ 
   Q: 211  SDSELRAWDIAYLQEIKDLEE 231
           ********9987766666655 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGLKQEVTC LCPSPDGLHL AVGYEDGSIR IFSLLSGEGN VTFNGHKAAI TSLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCTCA CCAAGCAGTA CCTTCGCTAT GTTGCCAGTG CAGTCTTTGG CCTCATTGGC 60
AGCCAGAAAG GCAATATTGT CTTTGTGACA CTTCGTGGGG AAAAAGGCCG CTACGTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	36.92	4.00e-147	515.00
IUUC-Aml-001245	Ailuropoda melanoleuca	93.85	0.00e+00	1669.00
IUUC-Atr-002700	Amborella trichopoda	39.41	1.00e-177	617.00
IUUC-Apl-004164	Anas platyrhynchos	78.55	0.00e+00	1071.00
IUUC-Aca-004765	Anolis carolinensis	74.31	0.00e+00	1380.00
IUUC-Aly-006503	Arabidopsis lyrata	38.64	2.00e-176	613.00
IUUC-Ath-006848	Arabidopsis thaliana	39.26	8.00e-180	624.00
IUUC-Ago-007909	Ashbya gossypii	35.82	7.00e-147	514.00
IUUC-Acl-008238	Aspergillus clavatus	38.94	0.00e+00	627.00
IUUC-Afl-008544	Aspergillus flavus	39.45	3.00e-179	622.00
IUUC-Afu-008868	Aspergillus fumigatus	39.12	4.00e-180	625.00
IUUC-Ani-009367	Aspergillus nidulans	38.59	1.00e-174	607.00
IUUC-Ang-009732	Aspergillus niger	39.79	0.00e+00	630.00
IUUC-Aor-010140	Aspergillus oryzae	39.52	7.00e-180	624.00
IUUC-Ate-010572	Aspergillus terreus	38.92	2.00e-178	620.00
IUUC-Ame-010956	Astyanax mexicanus	64.03	0.00e+00	1127.00
IUUC-Bgr-012296	Blumeria graminis	37.83	2.00e-172	599.00
IUUC-Bta-012716	Bos taurus	93.96	0.00e+00	1711.00
IUUC-Bci-013699	Botrytis cinerea	37.53	3.00e-163	568.00
IUUC-Bdi-014525	Brachypodium distachyon	36.81	1.00e-155	543.00
IUUC-Bol-015117	Brassica oleracea	38.59	1.00e-171	597.00
IUUC-Bra-016869	Brassica rapa	38.69	3.00e-173	602.00
IUUC-Cel-018570	Caenorhabditis elegans	34.13	2.00e-131	463.00
IUUC-Cja-019425	Callithrix jacchus	93.23	0.00e+00	1672.00
IUUC-Cfa-020787	Canis familiaris	93.21	0.00e+00	1690.00
IUUC-Cpo-021729	Cavia porcellus	92.65	0.00e+00	1180.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.64	2.00e-107	384.00
IUUC-Csa-024098	Chlorocebus sabaeus	94.06	0.00e+00	1686.00
IUUC-Cho-024495	Choloepus hoffmanni	78.24	0.00e+00	941.00
IUUC-Cin-025245	Ciona intestinalis	47.95	2.00e-166	578.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	38.77	7.00e-166	577.00
IUUC-Cne-026835	Cryptococcus neoformans	45.21	2.00e-125	443.00
IUUC-Cme-027162	Cyanidioschyzon merolae	28.16	4.00e-38	154.00
IUUC-Dre-027874	Danio rerio	71.14	0.00e+00	1294.00
IUUC-Dno-028905	Dasypus novemcinctus	92.79	0.00e+00	1686.00
IUUC-Dor-030383	Dipodomys ordii	87.61	0.00e+00	818.00
IUUC-Dse-031297	Dothistroma septosporum	38.27	8.00e-165	574.00
IUUC-Dme-031956	Drosophila melanogaster	42.39	0.00e+00	675.00
IUUC-Ete-032608	Echinops telfairi	82.02	0.00e+00	929.00
IUUC-Eca-034181	Equus caballus	94.17	0.00e+00	1667.00
IUUC-Eeu-034495	Erinaceus europaeus	93.16	0.00e+00	1614.00
IUUC-Fca-035994	Felis catus	93.65	0.00e+00	1576.00
IUUC-Fal-036611	Ficedula albicollis	77.87	0.00e+00	1346.00
IUUC-Fox-037807	Fusarium oxysporum	38.07	5.00e-170	591.00
IUUC-Fso-038090	Fusarium solani	37.78	2.00e-166	579.00
IUUC-Gmo-039018	Gadus morhua	63.87	0.00e+00	701.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.64	1.00e-169	590.00
IUUC-Gga-040707	Gallus gallus	79.28	0.00e+00	1363.00
IUUC-Gac-042334	Gasterosteus aculeatus	64.46	0.00e+00	691.00
IUUC-Gma-043860	Glycine max	37.76	1.00e-169	590.00
IUUC-Ggo-045334	Gorilla gorilla	93.86	0.00e+00	1638.00
IUUC-Hsa-046996	Homo sapiens	94.06	0.00e+00	1642.00
IUUC-Hvu-047381	Hordeum vulgare	32.67	1.00e-84	307.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	92.36	0.00e+00	1645.00
IUUC-Kpa-049185	Komagataella pastoris	35.60	5.00e-151	528.00
IUUC-Lch-050098	Latimeria chalumnae	67.28	0.00e+00	1153.00
IUUC-Lpe-050710	Leersia perrieri	36.30	8.00e-162	564.00
IUUC-Loc-052745	Lepisosteus oculatus	68.97	0.00e+00	1201.00
IUUC-Lma-053104	Leptosphaeria maculans	38.77	1.00e-177	617.00
IUUC-Laf-054395	Loxodonta africana	92.79	0.00e+00	1655.00
IUUC-Mcc-055077	Macaca mulatta	93.96	0.00e+00	1677.00
IUUC-Meu-056418	Macropus eugenii	82.73	0.00e+00	743.00
IUUC-Mor-057031	Magnaporthe oryzae	37.69	6.00e-155	541.00
IUUC-Mpo-057420	Magnaporthe poae	37.24	4.00e-166	578.00
IUUC-Mtr-057838	Medicago truncatula	37.54	4.00e-180	625.00
IUUC-Mla-058854	Melampsora laricipopulina	37.51	3.00e-159	555.00
IUUC-Mga-060120	Meleagris gallopavo	74.51	0.00e+00	1263.00
IUUC-Mvi-060407	Microbotryum violaceum	44.28	2.00e-137	483.00
IUUC-Mmr-060635	Microcebus murinus	92.80	0.00e+00	1639.00
IUUC-Mdo-063023	Monodelphis domestica	87.27	0.00e+00	1613.00
IUUC-Mmu-064103	Mus musculus	89.83	0.00e+00	1615.00
IUUC-Mac-065569	Musa acuminata	38.00	1.00e-168	587.00
IUUC-Mpu-066462	Mustela putorius furo	93.85	0.00e+00	1699.00
IUUC-Nfi-068321	Neosartorya fischeri	39.00	4.00e-178	618.00
IUUC-Ncr-068661	Neurospora crassa	38.56	9.00e-170	590.00
IUUC-Nle-069409	Nomascus leucogenys	93.85	0.00e+00	1653.00
IUUC-Opr-070445	Ochotona princeps	82.96	0.00e+00	1518.00
IUUC-Ont-072339	Oreochromis niloticus	70.56	0.00e+00	1250.00
IUUC-Oan-073688	Ornithorhynchus anatinus	77.22	0.00e+00	1363.00
IUUC-Ocu-074227	Oryctolagus cuniculus	94.38	0.00e+00	1713.00
IUUC-Oba-075635	Oryza barthii	36.74	2.00e-155	543.00
IUUC-Obr-076897	Oryza brachyantha	37.18	3.00e-166	579.00
IUUC-Ogl-077555	Oryza glaberrima	36.63	4.00e-155	542.00
IUUC-Ogu-078724	Oryza glumaepatula	36.74	2.00e-156	546.00
IUUC-Oin-080030	Oryza indica	36.74	1.00e-155	543.00
IUUC-Olo-080687	Oryza longistaminata	34.88	3.00e-144	506.00
IUUC-Ome-081867	Oryza meridionalis	36.84	4.00e-156	545.00
IUUC-Oni-082559	Oryza nivara	36.74	1.00e-155	543.00
IUUC-Opu-083332	Oryza punctata	38.95	5.00e-145	508.00
IUUC-Oru-084455	Oryza rufipogon	36.74	9.00e-156	544.00
IUUC-Osa-085793	Oryza sativa	36.74	9.00e-156	544.00
IUUC-Ola-087395	Oryzias latipes	68.79	0.00e+00	1155.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.46	1.00e-157	550.00
IUUC-Oga-088574	Otolemur garnettii	93.43	0.00e+00	1691.00
IUUC-Oar-089453	Ovis aries	92.06	0.00e+00	1691.00
IUUC-Ptr-090694	Pan troglodytes	93.96	0.00e+00	1638.00
IUUC-Pan-092420	Papio anubis	93.76	0.00e+00	1672.00
IUUC-Psi-093683	Pelodiscus sinensis	82.17	0.00e+00	1490.00
IUUC-Pma-094197	Petromyzon marinus	56.58	4.00e-71	260.00
IUUC-Pno-094783	Phaeosphaeria nodorum	37.87	2.00e-173	603.00
IUUC-Ppa-095208	Physcomitrella patens	39.42	1.00e-172	600.00
IUUC-Pfo-096299	Poecilia formosa	69.50	0.00e+00	1261.00
IUUC-Pab-098706	Pongo abelii	94.06	0.00e+00	1647.00
IUUC-Pop-099275	Populus trichocarpa	38.07	5.00e-172	598.00
IUUC-Pca-100796	Procavia capensis	77.05	0.00e+00	1246.00
IUUC-Ppe-101861	Prunus persica	40.51	2.00e-179	623.00
IUUC-Pva-103241	Pteropus vampyrus	89.05	0.00e+00	1528.00
IUUC-Pgr-103432	Puccinia graminis	37.54	4.00e-157	548.00
IUUC-Ptt-103742	Puccinia triticina	40.70	1.00e-107	384.00
IUUC-Pte-104069	Pyrenophora teres	37.84	1.00e-165	577.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	38.09	2.00e-173	602.00
IUUC-Rno-105219	Rattus norvegicus	89.62	0.00e+00	1576.00
IUUC-Sce-106271	Saccharomyces cerevisiae	36.93	6.00e-157	548.00
IUUC-Sha-107550	Sarcophilus harrisii	86.71	0.00e+00	1600.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	38.27	9.00e-164	570.00
IUUC-Spo-108239	Schizosaccharomyces pombe	37.97	6.00e-170	591.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	38.04	2.00e-168	586.00
IUUC-Smo-108974	Selaginella moellendorffii	39.04	2.00e-169	589.00
IUUC-Sit-110000	Setaria italica	37.63	1.00e-157	550.00
IUUC-Sly-111595	Solanum lycopersicum	38.14	2.00e-177	616.00
IUUC-Stu-112516	Solanum tuberosum	38.01	7.00e-176	611.00
IUUC-Sar-113195	Sorex araneus	82.96	0.00e+00	1329.00
IUUC-Sbi-114465	Sorghum bicolor	36.39	1.00e-164	573.00
IUUC-Sre-115006	Sporisorium reilianum	34.59	3.00e-149	522.00
IUUC-Ssc-115929	Sus scrofa	93.85	0.00e+00	1647.00
IUUC-Tgu-117282	Taeniopygia guttata	77.98	0.00e+00	1345.00
IUUC-Tru-118406	Takifugu rubripes	68.07	0.00e+00	1190.00
IUUC-Tsy-119170	Tarsius syrichta	91.85	0.00e+00	1667.00
IUUC-Tni-119721	Tetraodon nigroviridis	66.52	0.00e+00	1167.00
IUUC-Tca-121761	Theobroma cacao	39.37	2.00e-180	626.00
IUUC-Tre-121908	Trichoderma reesei	36.94	4.00e-166	578.00
IUUC-Tvi-122547	Trichoderma virens	37.94	3.00e-169	588.00
IUUC-Tae-125496	Triticum aestivum	37.54	7.00e-160	558.00
IUUC-Tur-126811	Triticum urartu	38.96	2.00e-159	556.00
IUUC-Tme-126987	Tuber melanosporum	39.10	6.00e-179	621.00
IUUC-Tbe-127315	Tupaia belangeri	94.60	0.00e+00	877.00
IUUC-Ttr-129165	Tursiops truncatus	84.62	0.00e+00	1444.00
IUUC-Uma-129651	Ustilago maydis	35.81	2.00e-150	526.00
IUUC-Vda-129973	Verticillium dahliae	38.45	4.00e-160	558.00
IUUC-Vpa-130163	Vicugna pacos	84.48	0.00e+00	740.00
IUUC-Vvi-131402	Vitis vinifera	37.37	5.00e-177	615.00
IUUC-Xtr-132296	Xenopus tropicalis	73.60	0.00e+00	1309.00
IUUC-Xma-133028	Xiphophorus maculatus	69.58	0.00e+00	1265.00
IUUC-Yli-134484	Yarrowia lipolytica	37.58	3.00e-152	532.00
IUUC-Zma-135938	Zea mays	35.88	3.00e-163	569.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence