iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095208

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545085

Gene Name

PHYPADRAFT_193196

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S196_2V6	PP1S196_2V6.1	PP1S196_2V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-49	162.5	145	183
UBD/Beta-Prp	6.80e-92	308.6	23	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f   ++ lvsG+ D  ++vWDl+t+ +++
   Q: 145  GHRDQVTDLVFleRSKKLVSGCKDTHVRVWDLDTQSCVQ 183
           8**********995599*******************987 PP

UBD/Beta-Prp

   S: 57   avkfspdgkilvtgseDrtikvwdlstgkcvhtlk...ghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpd 148
            v+f+++gk+l+ g+  +++ vw++++g cv  l    g    v++++  ps+ + +++G +d tirvwd+ +g+c   +l+gh+g+v+ ++++++
   Q: 23   RVCFDNSGKLLLAGALEQFL-VWNVKQGRCVNLLVpsaGARPLVTAIATAPSSaSLVAVGYKDGTIRVWDIVKGTCEM-VLTGHKGAVTALAYNKT 116
           58999999999999999887.999999999999987778888899999999665888899999999999999999999.99999999999999999 PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
           g+ll+sGs+D+ + +Wd   ++ l++l+g h d+v+ l f + +k lvsg +d+ v++wdl t++cv++   h++ v+ ++++p + ++v+gs+D 
   Q: 117  GSLLASGSTDTDIIVWDAVAETGLYRLKG-HRDQVTDLVFLERSKKLVSGCKDTHVRVWDLDTQSCVQRIVSHRSAVWALDVDPSERFVVTGSADA 211
           99999999999999999999999999998.999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 245  siriWdlrs 253
            ir++ + +
   Q: 212  EIRVFGVVN 220
           999985544 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MVKAYLRYEE GAAFGLVASG EARVCFDNSG KLLLAGALEQ FLVWNVKQGR CVNLLVPSAG 60
ARPLVTAIAT APSSASLVAV GYKDGTIRVW DIVKGTCEMV LTGHKGAVTA LAYNKTGSLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTTTGCTG CGTTATTGCA GCCATGGCGA GTCTGGTTTA GGGTTTCAGG CCCTCCACGT 60
TCCCCAGCCC CGCACCGTGA GTCCTGCACC CAGCCATGGT GAAGGCGTAT CTCCGCTACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ppp:PHYPADRAFT_193196

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	48.06	0.00e+00	753.00
IUUC-Aml-001245	Ailuropoda melanoleuca	39.79	2.00e-180	625.00
IUUC-Atr-002700	Amborella trichopoda	52.08	0.00e+00	943.00
IUUC-Apl-004164	Anas platyrhynchos	42.53	4.00e-150	524.00
IUUC-Aca-004765	Anolis carolinensis	40.23	0.00e+00	631.00
IUUC-Aly-006503	Arabidopsis lyrata	50.64	0.00e+00	893.00
IUUC-Ath-006848	Arabidopsis thaliana	51.76	0.00e+00	890.00
IUUC-Ago-007909	Ashbya gossypii	34.85	1.00e-151	530.00
IUUC-Acl-008238	Aspergillus clavatus	37.75	4.00e-167	581.00
IUUC-Afl-008544	Aspergillus flavus	36.09	3.00e-155	542.00
IUUC-Afu-008868	Aspergillus fumigatus	36.16	2.00e-159	555.00
IUUC-Ani-009367	Aspergillus nidulans	36.17	2.00e-158	552.00
IUUC-Ang-009732	Aspergillus niger	37.27	4.00e-167	581.00
IUUC-Aor-010140	Aspergillus oryzae	36.43	7.00e-158	550.00
IUUC-Ate-010572	Aspergillus terreus	36.44	8.00e-157	547.00
IUUC-Ame-010956	Astyanax mexicanus	45.74	2.00e-132	466.00
IUUC-Bgr-012296	Blumeria graminis	33.61	3.00e-157	548.00
IUUC-Bta-012716	Bos taurus	39.10	0.00e+00	650.00
IUUC-Bci-013699	Botrytis cinerea	34.96	2.00e-155	542.00
IUUC-Bdi-014525	Brachypodium distachyon	48.61	0.00e+00	840.00
IUUC-Bol-015117	Brassica oleracea	50.21	0.00e+00	889.00
IUUC-Bra-016869	Brassica rapa	50.11	0.00e+00	889.00
IUUC-Cel-018570	Caenorhabditis elegans	30.59	1.00e-97	350.00
IUUC-Cja-019425	Callithrix jacchus	39.34	0.00e+00	628.00
IUUC-Cfa-020787	Canis familiaris	40.13	0.00e+00	638.00
IUUC-Cpo-021729	Cavia porcellus	41.57	7.00e-139	486.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	50.19	9.00e-123	434.00
IUUC-Csa-024098	Chlorocebus sabaeus	39.70	0.00e+00	641.00
IUUC-Cho-024495	Choloepus hoffmanni	41.43	8.00e-103	367.00
IUUC-Cin-025245	Ciona intestinalis	35.42	2.00e-106	378.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	36.94	3.00e-158	551.00
IUUC-Cne-026835	Cryptococcus neoformans	40.55	1.00e-112	400.00
IUUC-Cme-027162	Cyanidioschyzon merolae	27.81	3.00e-35	143.00
IUUC-Dre-027874	Danio rerio	40.38	0.00e+00	647.00
IUUC-Dno-028905	Dasypus novemcinctus	40.23	0.00e+00	650.00
IUUC-Dor-030383	Dipodomys ordii	33.27	4.00e-71	262.00
IUUC-Dse-031297	Dothistroma septosporum	36.33	2.00e-156	545.00
IUUC-Dme-031956	Drosophila melanogaster	34.32	1.00e-143	503.00
IUUC-Ete-032608	Echinops telfairi	38.15	2.00e-104	372.00
IUUC-Eca-034181	Equus caballus	40.02	0.00e+00	642.00
IUUC-Eeu-034495	Erinaceus europaeus	39.96	6.00e-176	610.00
IUUC-Fca-035994	Felis catus	40.92	2.00e-176	612.00
IUUC-Fal-036611	Ficedula albicollis	44.35	8.00e-133	467.00
IUUC-Fox-037807	Fusarium oxysporum	37.04	1.00e-159	556.00
IUUC-Fso-038090	Fusarium solani	36.51	2.00e-157	549.00
IUUC-Gmo-039018	Gadus morhua	33.75	1.00e-86	313.00
IUUC-Ggr-039748	Gaeumannomyces graminis	36.40	2.00e-160	558.00
IUUC-Gga-040707	Gallus gallus	44.75	4.00e-134	471.00
IUUC-Gac-042334	Gasterosteus aculeatus	35.41	7.00e-47	181.00
IUUC-Gma-043860	Glycine max	52.14	0.00e+00	893.00
IUUC-Ggo-045334	Gorilla gorilla	39.55	0.00e+00	632.00
IUUC-Hsa-046996	Homo sapiens	39.59	0.00e+00	634.00
IUUC-Hvu-047381	Hordeum vulgare	46.28	2.00e-134	471.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	39.38	0.00e+00	629.00
IUUC-Kpa-049185	Komagataella pastoris	32.90	8.00e-145	507.00
IUUC-Lch-050098	Latimeria chalumnae	39.06	8.00e-155	540.00
IUUC-Lpe-050710	Leersia perrieri	51.43	0.00e+00	845.00
IUUC-Loc-052745	Lepisosteus oculatus	37.35	9.00e-167	580.00
IUUC-Lma-053104	Leptosphaeria maculans	35.51	4.00e-156	545.00
IUUC-Laf-054395	Loxodonta africana	39.59	0.00e+00	634.00
IUUC-Mcc-055077	Macaca mulatta	39.91	0.00e+00	637.00
IUUC-Meu-056418	Macropus eugenii	44.39	5.00e-102	365.00
IUUC-Mor-057031	Magnaporthe oryzae	36.29	1.00e-146	513.00
IUUC-Mpo-057420	Magnaporthe poae	37.04	8.00e-160	556.00
IUUC-Mtr-057838	Medicago truncatula	50.98	0.00e+00	921.00
IUUC-Mla-058854	Melampsora laricipopulina	34.35	3.00e-146	512.00
IUUC-Mga-060120	Meleagris gallopavo	42.58	1.00e-136	479.00
IUUC-Mvi-060407	Microbotryum violaceum	37.06	7.00e-177	613.00
IUUC-Mmr-060635	Microcebus murinus	39.26	2.00e-180	625.00
IUUC-Mdo-063023	Monodelphis domestica	39.21	0.00e+00	644.00
IUUC-Mmu-064103	Mus musculus	39.13	0.00e+00	637.00
IUUC-Mac-065569	Musa acuminata	51.65	0.00e+00	901.00
IUUC-Mpu-066462	Mustela putorius furo	39.91	0.00e+00	640.00
IUUC-Mlu-067894	Myotis lucifugus	39.70	0.00e+00	636.00
IUUC-Nfi-068321	Neosartorya fischeri	36.95	6.00e-163	567.00
IUUC-Ncr-068661	Neurospora crassa	41.70	2.00e-115	409.00
IUUC-Nle-069409	Nomascus leucogenys	39.59	0.00e+00	638.00
IUUC-Opr-070445	Ochotona princeps	42.14	6.00e-123	434.00
IUUC-Ont-072339	Oreochromis niloticus	39.42	9.00e-172	596.00
IUUC-Oan-073688	Ornithorhynchus anatinus	39.77	3.00e-171	595.00
IUUC-Ocu-074227	Oryctolagus cuniculus	39.70	0.00e+00	642.00
IUUC-Oba-075635	Oryza barthii	51.55	0.00e+00	819.00
IUUC-Obr-076897	Oryza brachyantha	52.54	0.00e+00	858.00
IUUC-Ogl-077555	Oryza glaberrima	51.55	0.00e+00	819.00
IUUC-Ogu-078724	Oryza glumaepatula	51.65	0.00e+00	822.00
IUUC-Oin-080030	Oryza indica	51.65	0.00e+00	822.00
IUUC-Olo-080687	Oryza longistaminata	48.56	0.00e+00	771.00
IUUC-Ome-081867	Oryza meridionalis	51.86	0.00e+00	823.00
IUUC-Oni-082559	Oryza nivara	51.55	0.00e+00	819.00
IUUC-Opu-083332	Oryza punctata	50.32	0.00e+00	748.00
IUUC-Oru-084455	Oryza rufipogon	51.55	0.00e+00	820.00
IUUC-Osa-085793	Oryza sativa	51.55	0.00e+00	820.00
IUUC-Ola-087395	Oryzias latipes	51.69	6.00e-107	381.00
IUUC-Olu-087768	Ostreococcus lucimarinus	43.77	0.00e+00	657.00
IUUC-Oga-088574	Otolemur garnettii	39.02	0.00e+00	629.00
IUUC-Oar-089453	Ovis aries	38.81	0.00e+00	647.00
IUUC-Ptr-090694	Pan troglodytes	39.70	0.00e+00	634.00
IUUC-Pan-092420	Papio anubis	39.66	0.00e+00	635.00
IUUC-Psi-093683	Pelodiscus sinensis	40.09	0.00e+00	646.00
IUUC-Pma-094197	Petromyzon marinus	41.05	2.00e-41	160.00
IUUC-Pno-094783	Phaeosphaeria nodorum	34.59	2.00e-152	532.00
IUUC-Pfo-096299	Poecilia formosa	39.58	2.00e-178	619.00
IUUC-Pab-098706	Pongo abelii	39.64	0.00e+00	638.00
IUUC-Pop-099275	Populus trichocarpa	53.22	0.00e+00	886.00
IUUC-Pca-100796	Procavia capensis	33.45	1.00e-125	443.00
IUUC-Ppe-101861	Prunus persica	53.09	0.00e+00	915.00
IUUC-Pva-103241	Pteropus vampyrus	37.98	1.00e-166	579.00
IUUC-Pgr-103432	Puccinia graminis	33.50	5.00e-146	511.00
IUUC-Ptt-103742	Puccinia triticina	35.82	2.00e-128	452.00
IUUC-Pte-104069	Pyrenophora teres	35.18	6.00e-149	521.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	35.18	7.00e-156	543.00
IUUC-Rno-105219	Rattus norvegicus	39.13	4.00e-179	621.00
IUUC-Sce-106271	Saccharomyces cerevisiae	33.90	3.00e-150	525.00
IUUC-Sha-107550	Sarcophilus harrisii	39.32	0.00e+00	634.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	34.44	4.00e-152	531.00
IUUC-Spo-108239	Schizosaccharomyces pombe	34.18	3.00e-157	548.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	34.79	1.00e-160	559.00
IUUC-Smo-109477	Selaginella moellendorffii	58.65	0.00e+00	1009.00
IUUC-Sit-110000	Setaria italica	50.57	0.00e+00	828.00
IUUC-Sly-111595	Solanum lycopersicum	53.90	0.00e+00	900.00
IUUC-Stu-112516	Solanum tuberosum	53.33	0.00e+00	891.00
IUUC-Sar-113195	Sorex araneus	44.48	6.00e-120	424.00
IUUC-Sbi-114465	Sorghum bicolor	50.64	0.00e+00	836.00
IUUC-Sre-115006	Sporisorium reilianum	33.12	3.00e-147	515.00
IUUC-Ssc-115929	Sus scrofa	39.59	0.00e+00	631.00
IUUC-Tgu-117282	Taeniopygia guttata	44.44	1.00e-132	466.00
IUUC-Tru-118406	Takifugu rubripes	39.91	1.00e-176	613.00
IUUC-Tsy-119170	Tarsius syrichta	38.87	5.00e-179	620.00
IUUC-Tni-119721	Tetraodon nigroviridis	39.79	1.00e-167	583.00
IUUC-Tca-121761	Theobroma cacao	54.75	0.00e+00	954.00
IUUC-Tre-121908	Trichoderma reesei	36.02	3.00e-157	548.00
IUUC-Tvi-122547	Trichoderma virens	35.45	3.00e-157	548.00
IUUC-Tae-125433	Triticum aestivum	49.22	0.00e+00	807.00
IUUC-Tur-126811	Triticum urartu	51.55	0.00e+00	805.00
IUUC-Tme-126987	Tuber melanosporum	36.05	8.00e-163	566.00
IUUC-Tbe-127315	Tupaia belangeri	46.28	2.00e-111	396.00
IUUC-Ttr-129165	Tursiops truncatus	30.15	4.00e-70	259.00
IUUC-Uma-129651	Ustilago maydis	33.27	1.00e-148	520.00
IUUC-Vda-129973	Verticillium dahliae	35.65	1.00e-151	530.00
IUUC-Vpa-130163	Vicugna pacos	31.97	4.00e-64	239.00
IUUC-Vvi-131402	Vitis vinifera	53.52	0.00e+00	921.00
IUUC-Xtr-132296	Xenopus tropicalis	39.58	0.00e+00	642.00
IUUC-Xma-133028	Xiphophorus maculatus	39.64	8.00e-175	607.00
IUUC-Yli-134484	Yarrowia lipolytica	38.01	1.00e-131	463.00
IUUC-Zma-135938	Zea mays	49.28	0.00e+00	835.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence