iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126811

Ensembl Protein ID

TRIUR3_01164-P1

UniProt Accession

M7YY51; M7YY51_TRIUA

Genbank Protein ID

EMS44990.1

Protein Name

WD repeat-containing protein 3

Genbank Nucleotide ID

KD292409

Gene Name

TRIUR3_01164

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_01164	TRIUR3_01164-T1	TRIUR3_01164-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-49	163.7	76	114
UBD/Beta-Prp	2.70e-98	329.5	36	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f  s++ lv++s D+ i+vWDl+t+++l+
   Q: 76   GHRDQVTDLVFldSGKKLVTCSKDKFIRVWDLDTQHCLQ 114
           8**********95559*********************97 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
            s  +++ f+p++ +la+gs+d  +++wdv  +  l +l gh ++vt++ f ++gk lvt+s+D++i+vwdl+t  c++++ gh ++++s++++
   Q: 36   RSAASAIRFAPSGAVLASGSKDCDVILWDVVAQAGLFRLRGHRDQVTDLVFLDSGKKLVTCSKDKFIRVWDLDTQHCLQIVGGHHSEIWSMDVD 129
           56678899************************************************************************************** PP
   S: 104  psgdklvsGshdrtirvwdletgqclee.............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.................. 166
           ps ++lvsGs+d  +rv+ +++  +  e             + ++ ++ ++++++++dg+l++   + +t  ++++                  
   Q: 130  PSEKFLVSGSADPELRVFRIRQSAEEGEdwnkwdalklfgeIPRQSKERIQTIRFNKDGSLVACQVAGKTADIYRIldeteatrkakrrlhrkk 223
           ********************999999989****************************************************8888888888888 PP
   S: 167  .................................ktgkllrtltgghtdsvyslsfdsng......kelvsgsldgtvklwdlq....tgecvrt 217
                                               kll+ l+    +++ s++f+++         l    +++ ++ +++     ++   ++
   Q: 224  ekasakaaaaegngsvidplpaqdsqnptvvvtDVFKLLQVLR--TSKKICSVAFSPSNppkgclATLSLSLNNNVLETYSVDiekvSKMYSVE 315
           7777777777766666666666666555554443444444444..35666666677777**9887777777788999****99888888889** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
            +gh++ ++s+++ ++d++l+s+s ++ ++iW+  +gd+l+t+
   Q: 316  IHGHRSDIRSLALNSEDNLLMSTS-HNAVKIWNPSTGDCLRTV 357
           ***********************8.9**************986 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MVFLAIKKVA SGHADGSIRL WDAETGACEA TLHGHRSAAS AIRFAPSGAV LASGSKDCDV 60
ILWDVVAQAG LFRLRGHRDQ VTDLVFLDSG KKLVTCSKDK FIRVWDLDTQ HCLQIVGGHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTATTCT TAGCCATCAA AAAGGTAAGT ACACTGATAT CAAAGGTGGA TATAGCTTCA 60
TATGACCATA TAAAATGACA GTCGACATTA AACATGGTTT GAAAGAACTC GAATCAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	91.53	0.00e+00	1506.00
IUUC-Aml-001245	Ailuropoda melanoleuca	39.06	1.00e-165	575.00
IUUC-Atr-002700	Amborella trichopoda	60.12	0.00e+00	973.00
IUUC-Apl-004164	Anas platyrhynchos	41.73	5.00e-143	500.00
IUUC-Aca-004765	Anolis carolinensis	39.13	3.00e-168	584.00
IUUC-Aly-006503	Arabidopsis lyrata	61.16	0.00e+00	1012.00
IUUC-Ath-006848	Arabidopsis thaliana	62.25	0.00e+00	1041.00
IUUC-Ago-007909	Ashbya gossypii	35.20	6.00e-142	497.00
IUUC-Acl-008238	Aspergillus clavatus	39.27	3.00e-155	541.00
IUUC-Afl-008544	Aspergillus flavus	39.30	3.00e-152	531.00
IUUC-Afu-008868	Aspergillus fumigatus	39.45	5.00e-155	541.00
IUUC-Ani-009367	Aspergillus nidulans	39.33	9.00e-154	536.00
IUUC-Ang-009732	Aspergillus niger	39.70	1.00e-158	552.00
IUUC-Aor-010140	Aspergillus oryzae	39.30	3.00e-152	531.00
IUUC-Ate-010572	Aspergillus terreus	38.68	9.00e-153	533.00
IUUC-Ame-010956	Astyanax mexicanus	44.46	7.00e-126	444.00
IUUC-Bgr-012296	Blumeria graminis	36.73	2.00e-150	525.00
IUUC-Bta-012716	Bos taurus	40.00	5.00e-170	590.00
IUUC-Bci-013699	Botrytis cinerea	36.73	1.00e-150	526.00
IUUC-Bdi-014525	Brachypodium distachyon	92.98	0.00e+00	1503.00
IUUC-Bol-015117	Brassica oleracea	62.16	0.00e+00	996.00
IUUC-Bra-016869	Brassica rapa	61.69	0.00e+00	997.00
IUUC-Cel-018570	Caenorhabditis elegans	31.59	8.00e-95	340.00
IUUC-Cja-019425	Callithrix jacchus	40.02	8.00e-169	586.00
IUUC-Cfa-020787	Canis familiaris	39.42	3.00e-165	574.00
IUUC-Cpo-021729	Cavia porcellus	42.22	4.00e-139	487.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	48.64	1.00e-119	423.00
IUUC-Csa-024098	Chlorocebus sabaeus	40.88	2.00e-172	598.00
IUUC-Cho-024495	Choloepus hoffmanni	40.57	1.00e-99	356.00
IUUC-Cin-025245	Ciona intestinalis	33.80	3.00e-98	351.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.46	3.00e-145	508.00
IUUC-Cne-026835	Cryptococcus neoformans	40.37	4.00e-110	391.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.71	3.00e-41	162.00
IUUC-Dre-027874	Danio rerio	41.27	4.00e-170	591.00
IUUC-Dno-028905	Dasypus novemcinctus	40.47	7.00e-172	596.00
IUUC-Dor-030383	Dipodomys ordii	42.44	6.00e-66	244.00
IUUC-Dse-031297	Dothistroma septosporum	36.07	7.00e-139	487.00
IUUC-Dme-031956	Drosophila melanogaster	33.02	7.00e-123	434.00
IUUC-Ete-032608	Echinops telfairi	37.97	5.00e-101	360.00
IUUC-Eca-034181	Equus caballus	40.58	5.00e-168	583.00
IUUC-Eeu-034495	Erinaceus europaeus	40.17	3.00e-162	565.00
IUUC-Fca-035994	Felis catus	40.99	9.00e-159	553.00
IUUC-Fal-036611	Ficedula albicollis	45.45	9.00e-134	470.00
IUUC-Fox-037807	Fusarium oxysporum	36.47	7.00e-149	520.00
IUUC-Fso-038090	Fusarium solani	36.22	2.00e-145	509.00
IUUC-Gmo-039018	Gadus morhua	34.50	1.00e-74	273.00
IUUC-Ggr-039748	Gaeumannomyces graminis	36.18	7.00e-148	517.00
IUUC-Gga-040707	Gallus gallus	44.95	5.00e-134	471.00
IUUC-Gac-042334	Gasterosteus aculeatus	45.89	4.00e-35	142.00
IUUC-Gma-043860	Glycine max	64.54	0.00e+00	1020.00
IUUC-Ggo-045334	Gorilla gorilla	40.26	1.00e-168	586.00
IUUC-Hsa-046996	Homo sapiens	40.23	1.00e-169	589.00
IUUC-Hvu-047381	Hordeum vulgare	98.11	0.00e+00	905.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	40.05	5.00e-166	577.00
IUUC-Kpa-049185	Komagataella pastoris	33.91	3.00e-137	481.00
IUUC-Lch-050098	Latimeria chalumnae	40.05	3.00e-145	508.00
IUUC-Lpe-050710	Leersia perrieri	83.97	0.00e+00	1341.00
IUUC-Loc-052745	Lepisosteus oculatus	38.43	7.00e-156	543.00
IUUC-Lma-053104	Leptosphaeria maculans	37.28	2.00e-154	540.00
IUUC-Laf-054395	Loxodonta africana	40.69	4.00e-170	590.00
IUUC-Mcc-055077	Macaca mulatta	40.42	2.00e-170	592.00
IUUC-Meu-056418	Macropus eugenii	43.84	4.00e-102	365.00
IUUC-Mor-057031	Magnaporthe oryzae	36.73	2.00e-135	476.00
IUUC-Mpo-057420	Magnaporthe poae	37.33	7.00e-144	504.00
IUUC-Mtr-057838	Medicago truncatula	62.50	0.00e+00	1040.00
IUUC-Mla-058854	Melampsora laricipopulina	35.45	1.00e-134	473.00
IUUC-Mga-060120	Meleagris gallopavo	41.64	2.00e-133	469.00
IUUC-Mvi-060407	Microbotryum violaceum	42.30	2.00e-128	452.00
IUUC-Mmr-060635	Microcebus murinus	40.26	3.00e-170	591.00
IUUC-Mdo-063023	Monodelphis domestica	39.79	6.00e-170	590.00
IUUC-Mmu-064103	Mus musculus	40.62	2.00e-173	602.00
IUUC-Mac-065569	Musa acuminata	73.49	0.00e+00	1241.00
IUUC-Mpu-066462	Mustela putorius furo	39.68	4.00e-166	577.00
IUUC-Mlu-067894	Myotis lucifugus	39.53	2.00e-164	572.00
IUUC-Nfi-068321	Neosartorya fischeri	39.68	4.00e-155	541.00
IUUC-Ncr-068661	Neurospora crassa	36.38	3.00e-149	521.00
IUUC-Nle-069409	Nomascus leucogenys	40.58	5.00e-171	593.00
IUUC-Opr-070445	Ochotona princeps	42.98	5.00e-128	451.00
IUUC-Ont-072339	Oreochromis niloticus	39.35	1.00e-163	569.00
IUUC-Oan-073688	Ornithorhynchus anatinus	40.30	5.00e-161	560.00
IUUC-Ocu-074227	Oryctolagus cuniculus	40.23	1.00e-169	589.00
IUUC-Oba-075635	Oryza barthii	86.22	0.00e+00	1339.00
IUUC-Obr-076897	Oryza brachyantha	86.17	0.00e+00	1387.00
IUUC-Ogl-077555	Oryza glaberrima	86.10	0.00e+00	1337.00
IUUC-Ogu-078724	Oryza glumaepatula	85.99	0.00e+00	1337.00
IUUC-Oin-080030	Oryza indica	85.99	0.00e+00	1333.00
IUUC-Olo-080687	Oryza longistaminata	80.70	0.00e+00	1281.00
IUUC-Ome-081867	Oryza meridionalis	86.34	0.00e+00	1340.00
IUUC-Oni-082559	Oryza nivara	85.99	0.00e+00	1332.00
IUUC-Opu-083332	Oryza punctata	80.58	0.00e+00	1222.00
IUUC-Oru-084455	Oryza rufipogon	85.87	0.00e+00	1331.00
IUUC-Osa-085793	Oryza sativa	85.87	0.00e+00	1331.00
IUUC-Ola-087395	Oryzias latipes	43.26	2.00e-118	419.00
IUUC-Olu-087768	Ostreococcus lucimarinus	44.23	0.00e+00	651.00
IUUC-Oga-088574	Otolemur garnettii	40.23	4.00e-168	584.00
IUUC-Oar-089453	Ovis aries	39.33	2.00e-169	588.00
IUUC-Ptr-090694	Pan troglodytes	40.47	7.00e-171	593.00
IUUC-Pan-092420	Papio anubis	40.21	2.00e-168	585.00
IUUC-Psi-093683	Pelodiscus sinensis	39.93	1.00e-166	579.00
IUUC-Pma-094197	Petromyzon marinus	46.85	4.00e-36	143.00
IUUC-Pno-094783	Phaeosphaeria nodorum	36.79	1.00e-149	523.00
IUUC-Ppa-095208	Physcomitrella patens	53.00	0.00e+00	799.00
IUUC-Pfo-096299	Poecilia formosa	39.36	2.00e-169	588.00
IUUC-Pab-098706	Pongo abelii	40.75	2.00e-169	588.00
IUUC-Pop-099275	Populus trichocarpa	64.91	0.00e+00	1055.00
IUUC-Pca-100796	Procavia capensis	33.37	1.00e-114	406.00
IUUC-Ppe-101861	Prunus persica	65.46	0.00e+00	1065.00
IUUC-Pva-103241	Pteropus vampyrus	37.51	3.00e-161	561.00
IUUC-Pgr-103432	Puccinia graminis	34.72	1.00e-130	459.00
IUUC-Ptt-103742	Puccinia triticina	37.96	1.00e-112	400.00
IUUC-Pte-104069	Pyrenophora teres	37.33	3.00e-146	511.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	37.44	4.00e-154	538.00
IUUC-Rno-105219	Rattus norvegicus	39.24	1.00e-164	573.00
IUUC-Sce-106271	Saccharomyces cerevisiae	34.57	3.00e-135	475.00
IUUC-Sha-107550	Sarcophilus harrisii	38.91	5.00e-163	567.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	35.66	3.00e-148	518.00
IUUC-Spo-108239	Schizosaccharomyces pombe	36.30	2.00e-155	542.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	36.82	1.00e-152	533.00
IUUC-Smo-109477	Selaginella moellendorffii	53.86	0.00e+00	870.00
IUUC-Sit-110000	Setaria italica	87.27	0.00e+00	1392.00
IUUC-Sly-111595	Solanum lycopersicum	62.22	0.00e+00	983.00
IUUC-Stu-112516	Solanum tuberosum	62.04	0.00e+00	986.00
IUUC-Sar-113195	Sorex araneus	46.14	4.00e-127	447.00
IUUC-Sbi-114465	Sorghum bicolor	84.81	0.00e+00	1387.00
IUUC-Sre-115006	Sporisorium reilianum	35.41	6.00e-134	471.00
IUUC-Ssc-115929	Sus scrofa	39.88	4.00e-168	584.00
IUUC-Tgu-117282	Taeniopygia guttata	44.85	1.00e-130	459.00
IUUC-Tru-118406	Takifugu rubripes	38.60	3.00e-158	551.00
IUUC-Tsy-119170	Tarsius syrichta	40.51	1.00e-164	572.00
IUUC-Tni-119721	Tetraodon nigroviridis	38.95	3.00e-153	535.00
IUUC-Tca-121761	Theobroma cacao	65.38	0.00e+00	1078.00
IUUC-Tre-121908	Trichoderma reesei	36.52	8.00e-149	520.00
IUUC-Tvi-122547	Trichoderma virens	37.06	3.00e-150	525.00
IUUC-Tae-125433	Triticum aestivum	99.88	0.00e+00	1541.00
IUUC-Tme-126987	Tuber melanosporum	39.08	3.00e-163	568.00
IUUC-Tbe-127315	Tupaia belangeri	46.90	4.00e-112	398.00
IUUC-Ttr-129165	Tursiops truncatus	34.45	7.00e-126	444.00
IUUC-Uma-129651	Ustilago maydis	35.45	1.00e-135	476.00
IUUC-Vda-129973	Verticillium dahliae	36.46	3.00e-138	485.00
IUUC-Vpa-130163	Vicugna pacos	31.95	2.00e-57	216.00
IUUC-Vvi-131402	Vitis vinifera	64.03	0.00e+00	1053.00
IUUC-Xtr-132296	Xenopus tropicalis	39.88	5.00e-165	573.00
IUUC-Xma-133028	Xiphophorus maculatus	39.56	2.00e-167	582.00
IUUC-Yli-134484	Yarrowia lipolytica	38.43	2.00e-152	532.00
IUUC-Zma-135938	Zea mays	85.09	0.00e+00	1385.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence