iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d027706	Zm00001d027706_T004	Zm00001d027706_T004
Zm00001d027706	Zm00001d027706_T005	Zm00001d027706_T005
Zm00001d027706	Zm00001d027706_T003	Zm00001d027706_T003
Zm00001d027706	Zm00001d027706_T002	Zm00001d027706_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-47	159.9	168	206
UBD/Beta-Prp	1.00e-92	312.5	134	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f  s++ l s+s D+ i+vWDl t+++l+
   Q: 168  GHRDQVTDLVFldSGKKLMSCSKDKFIRVWDLETQHCLQ 206
           8**********95559*********************97 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           + f p++ +la+gs+d  +++wdv  +  l +l gh ++vt++ f ++gk l+++s+D++i+vwdl+t  c++++ gh ++++s++++ps
   Q: 134  LRFGPSGAVLASGSKDCDVILWDVVAQAGLFRLRGHRDQVTDLVFLDSGKKLMSCSKDKFIRVWDLETQHCLQIVGGHRSEIWSMDVDPS 223
           678899************************************************************************************ PP
   S: 106  gdklvsGshdrtirvwdletgqclee.............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl................ 166
             +lvsGs+d  ++v+ +++  +  e             + ++ ++ v  v+++ dg+l+v   + +t  ++++                
   Q: 224  ERFLVSGSADPELQVFRIRQSVEEGEdwskwdvlklfgeIPRQSKERVANVRFNRDGSLVVCQVAGKTADIYRVldeteaarkakrrvsr 313
           ****************99888887779***********************************************9999855544444444 PP
   S: 167  .ktgkllrtltgghtdsvyslsfdsng.................................................kelvsgsldgtvkl 206
            k            + s +s++ ++ng                                                   l    +++ ++ 
   Q: 314  kK-----------EKASAKSMIAEENGtiidplpvqnlqnptvivtdvfklfqvlraskkicsitfspsnpprgclATLSLSLNNNMLET 392
           40...........555666666555555555555555555555555555555566666666666666666**999777777778999*** PP
   S: 207  wdlqtgec....vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           +++ ++++     ++++gh++ ++sv + ++d++l+s+s ++ ++iW+  +g++l+t+
   Q: 393  YSVDKEKVskmySVEMHGHRSDIRSVSLNSEDNLLMSTS-HNAVKIWNPSTGECLRTI 449
           ****55555555999***********************8.9**************987 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MVKAYLRYEP ALTFGVIASP ESNVVYDPSG RRLLAAALDR LAAWDIKRGL PSVSFAPSSS 60
SPSLAVSCIA SSHSAAVSSS VPLIPLRLSL SSALFEFGRL IASGHADGSI RLWDAETGAC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAACCCTA AGACACAAGC GCGCTGCCTG AACCACCCAG CCCACGCGCC GGCGGCCGCC 60
CGCCATGGTG AAGGCTTACC TCCGCTACGA GCCGGCCCTC ACCTTCGGTG TGATTGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	78.74	0.00e+00	1316.00
IUUC-Aml-001245	Ailuropoda melanoleuca	36.23	4.00e-163	568.00
IUUC-Atr-002700	Amborella trichopoda	55.87	0.00e+00	976.00
IUUC-Apl-004164	Anas platyrhynchos	40.23	1.00e-134	473.00
IUUC-Aca-004765	Anolis carolinensis	36.96	1.00e-167	583.00
IUUC-Aly-006503	Arabidopsis lyrata	56.89	0.00e+00	1015.00
IUUC-Ath-006848	Arabidopsis thaliana	56.52	0.00e+00	1031.00
IUUC-Ago-007909	Ashbya gossypii	33.37	3.00e-141	495.00
IUUC-Acl-008238	Aspergillus clavatus	36.68	2.00e-150	526.00
IUUC-Afl-008544	Aspergillus flavus	37.81	7.00e-147	514.00
IUUC-Afu-008868	Aspergillus fumigatus	38.65	7.00e-152	531.00
IUUC-Ani-009367	Aspergillus nidulans	35.47	2.00e-148	520.00
IUUC-Ang-009732	Aspergillus niger	37.09	6.00e-158	551.00
IUUC-Aor-010140	Aspergillus oryzae	35.88	1.00e-148	520.00
IUUC-Ate-010572	Aspergillus terreus	35.35	1.00e-149	524.00
IUUC-Ame-010956	Astyanax mexicanus	36.17	8.00e-151	527.00
IUUC-Bgr-012296	Blumeria graminis	33.74	1.00e-148	520.00
IUUC-Bta-012716	Bos taurus	36.08	8.00e-166	577.00
IUUC-Bci-013699	Botrytis cinerea	35.71	8.00e-146	510.00
IUUC-Bdi-014525	Brachypodium distachyon	81.25	0.00e+00	1442.00
IUUC-Bol-015117	Brassica oleracea	57.07	0.00e+00	986.00
IUUC-Bra-016869	Brassica rapa	57.07	0.00e+00	988.00
IUUC-Cel-018570	Caenorhabditis elegans	31.28	1.00e-93	337.00
IUUC-Cja-019425	Callithrix jacchus	36.42	3.00e-164	572.00
IUUC-Cfa-020787	Canis familiaris	36.53	1.00e-162	566.00
IUUC-Cpo-021729	Cavia porcellus	39.82	5.00e-134	471.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	47.36	4.00e-114	405.00
IUUC-Csa-024098	Chlorocebus sabaeus	36.93	8.00e-168	583.00
IUUC-Cho-024495	Choloepus hoffmanni	34.85	2.00e-94	339.00
IUUC-Cin-025245	Ciona intestinalis	32.87	8.00e-96	343.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	34.40	1.00e-143	503.00
IUUC-Cne-026835	Cryptococcus neoformans	40.20	5.00e-107	382.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.08	7.00e-62	232.00
IUUC-Dre-027874	Danio rerio	38.60	1.00e-166	579.00
IUUC-Dno-028905	Dasypus novemcinctus	36.74	8.00e-167	580.00
IUUC-Dor-030383	Dipodomys ordii	40.34	2.00e-64	240.00
IUUC-Dse-031297	Dothistroma septosporum	33.78	3.00e-143	502.00
IUUC-Dme-031956	Drosophila melanogaster	32.91	3.00e-120	426.00
IUUC-Ete-032608	Echinops telfairi	35.47	1.00e-93	336.00
IUUC-Eca-034181	Equus caballus	36.74	6.00e-165	574.00
IUUC-Eeu-034495	Erinaceus europaeus	36.84	1.00e-160	560.00
IUUC-Fca-035994	Felis catus	36.59	1.00e-155	543.00
IUUC-Fal-036611	Ficedula albicollis	37.33	9.00e-164	570.00
IUUC-Fox-037807	Fusarium oxysporum	34.26	3.00e-148	519.00
IUUC-Fso-038090	Fusarium solani	33.47	4.00e-144	505.00
IUUC-Gmo-039018	Gadus morhua	31.83	2.00e-74	273.00
IUUC-Ggr-039748	Gaeumannomyces graminis	34.47	4.00e-149	521.00
IUUC-Gga-040707	Gallus gallus	37.58	5.00e-165	574.00
IUUC-Gac-042334	Gasterosteus aculeatus	29.69	2.00e-39	156.00
IUUC-Gma-043860	Glycine max	59.36	0.00e+00	1003.00
IUUC-Ggo-045334	Gorilla gorilla	36.79	5.00e-164	571.00
IUUC-Hsa-046996	Homo sapiens	36.66	5.00e-165	574.00
IUUC-Hvu-047381	Hordeum vulgare	81.83	0.00e+00	868.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	35.91	1.00e-161	563.00
IUUC-Kpa-049185	Komagataella pastoris	32.36	5.00e-139	488.00
IUUC-Lch-050098	Latimeria chalumnae	38.08	6.00e-138	484.00
IUUC-Lpe-050710	Leersia perrieri	83.17	0.00e+00	1329.00
IUUC-Loc-052745	Lepisosteus oculatus	36.03	1.00e-150	526.00
IUUC-Lma-053104	Leptosphaeria maculans	34.09	4.00e-152	533.00
IUUC-Laf-054395	Loxodonta africana	36.96	2.00e-164	573.00
IUUC-Mcc-055077	Macaca mulatta	36.83	5.00e-166	577.00
IUUC-Meu-056418	Macropus eugenii	43.13	2.00e-98	353.00
IUUC-Mor-057031	Magnaporthe oryzae	33.95	1.00e-131	464.00
IUUC-Mpo-057420	Magnaporthe poae	34.09	1.00e-142	500.00
IUUC-Mtr-057838	Medicago truncatula	59.50	0.00e+00	1057.00
IUUC-Mla-058854	Melampsora laricipopulina	33.72	7.00e-133	468.00
IUUC-Mga-060120	Meleagris gallopavo	40.71	2.00e-129	456.00
IUUC-Mvi-060407	Microbotryum violaceum	41.39	2.00e-124	440.00
IUUC-Mmr-060635	Microcebus murinus	36.34	2.00e-164	572.00
IUUC-Mdo-063023	Monodelphis domestica	36.91	3.00e-167	582.00
IUUC-Mmu-064103	Mus musculus	36.53	3.00e-168	585.00
IUUC-Mac-065569	Musa acuminata	69.16	0.00e+00	1249.00
IUUC-Mpu-066462	Mustela putorius furo	36.17	1.00e-162	566.00
IUUC-Mlu-067894	Myotis lucifugus	36.22	8.00e-163	567.00
IUUC-Nfi-068321	Neosartorya fischeri	38.58	5.00e-150	525.00
IUUC-Ncr-068661	Neurospora crassa	34.42	8.00e-149	520.00
IUUC-Nle-069409	Nomascus leucogenys	36.97	1.00e-166	579.00
IUUC-Opr-070445	Ochotona princeps	41.40	1.00e-121	430.00
IUUC-Ont-072339	Oreochromis niloticus	36.71	6.00e-160	557.00
IUUC-Oan-073688	Ornithorhynchus anatinus	36.99	4.00e-157	548.00
IUUC-Ocu-074227	Oryctolagus cuniculus	36.84	2.00e-166	579.00
IUUC-Oba-075635	Oryza barthii	81.82	0.00e+00	1363.00
IUUC-Obr-076897	Oryza brachyantha	81.88	0.00e+00	1436.00
IUUC-Ogl-077555	Oryza glaberrima	81.71	0.00e+00	1362.00
IUUC-Ogu-078724	Oryza glumaepatula	81.60	0.00e+00	1367.00
IUUC-Oin-080030	Oryza indica	81.60	0.00e+00	1359.00
IUUC-Olo-080687	Oryza longistaminata	77.31	0.00e+00	1307.00
IUUC-Ome-081867	Oryza meridionalis	81.82	0.00e+00	1362.00
IUUC-Oni-082559	Oryza nivara	81.50	0.00e+00	1356.00
IUUC-Opu-083332	Oryza punctata	77.33	0.00e+00	1244.00
IUUC-Oru-084455	Oryza rufipogon	81.50	0.00e+00	1357.00
IUUC-Osa-085793	Oryza sativa	81.50	0.00e+00	1357.00
IUUC-Ola-087395	Oryzias latipes	38.31	3.00e-137	482.00
IUUC-Olu-087768	Ostreococcus lucimarinus	43.76	0.00e+00	627.00
IUUC-Oga-088574	Otolemur garnettii	36.08	6.00e-164	571.00
IUUC-Oar-089453	Ovis aries	35.91	4.00e-166	578.00
IUUC-Ptr-090694	Pan troglodytes	36.87	3.00e-166	578.00
IUUC-Pan-092420	Papio anubis	36.86	8.00e-165	573.00
IUUC-Psi-093683	Pelodiscus sinensis	36.80	9.00e-162	563.00
IUUC-Pma-094197	Petromyzon marinus	47.55	1.00e-36	145.00
IUUC-Pno-094783	Phaeosphaeria nodorum	33.57	7.00e-146	511.00
IUUC-Ppa-095208	Physcomitrella patens	49.53	0.00e+00	809.00
IUUC-Pfo-096299	Poecilia formosa	37.18	1.00e-166	580.00
IUUC-Pab-098706	Pongo abelii	36.71	1.00e-164	573.00
IUUC-Pop-099275	Populus trichocarpa	60.36	0.00e+00	1081.00
IUUC-Pca-100796	Procavia capensis	32.10	4.00e-110	392.00
IUUC-Ppe-101861	Prunus persica	60.62	0.00e+00	1090.00
IUUC-Pva-103241	Pteropus vampyrus	36.82	2.00e-159	555.00
IUUC-Pgr-103432	Puccinia graminis	33.46	1.00e-128	454.00
IUUC-Ptt-103742	Puccinia triticina	34.63	1.00e-108	387.00
IUUC-Pte-104069	Pyrenophora teres	34.25	4.00e-144	505.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	34.53	5.00e-150	524.00
IUUC-Rno-105219	Rattus norvegicus	35.85	1.00e-160	560.00
IUUC-Sce-106271	Saccharomyces cerevisiae	34.46	1.00e-133	470.00
IUUC-Sha-107550	Sarcophilus harrisii	36.21	4.00e-161	561.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	35.16	2.00e-152	532.00
IUUC-Spo-108239	Schizosaccharomyces pombe	34.78	7.00e-159	554.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	35.92	3.00e-149	522.00
IUUC-Smo-109477	Selaginella moellendorffii	51.50	0.00e+00	868.00
IUUC-Sit-110000	Setaria italica	90.30	0.00e+00	1546.00
IUUC-Sly-111595	Solanum lycopersicum	58.32	0.00e+00	987.00
IUUC-Stu-112516	Solanum tuberosum	58.60	0.00e+00	990.00
IUUC-Sar-113195	Sorex araneus	43.92	1.00e-121	430.00
IUUC-Sbi-114465	Sorghum bicolor	96.26	0.00e+00	1579.00
IUUC-Sre-115006	Sporisorium reilianum	34.35	9.00e-138	484.00
IUUC-Ssc-115929	Sus scrofa	36.64	4.00e-165	575.00
IUUC-Tgu-117282	Taeniopygia guttata	42.86	1.00e-123	437.00
IUUC-Tru-118406	Takifugu rubripes	35.93	7.00e-154	537.00
IUUC-Tsy-119170	Tarsius syrichta	36.35	6.00e-161	561.00
IUUC-Tni-119721	Tetraodon nigroviridis	36.58	1.00e-151	530.00
IUUC-Tca-121761	Theobroma cacao	61.95	0.00e+00	1101.00
IUUC-Tre-121908	Trichoderma reesei	33.95	6.00e-146	511.00
IUUC-Tvi-122547	Trichoderma virens	34.84	2.00e-148	519.00
IUUC-Tae-125433	Triticum aestivum	80.94	0.00e+00	1385.00
IUUC-Tur-126811	Triticum urartu	84.65	0.00e+00	1374.00
IUUC-Tme-126987	Tuber melanosporum	37.20	1.00e-164	573.00
IUUC-Tbe-127315	Tupaia belangeri	44.17	2.00e-107	383.00
IUUC-Ttr-129165	Tursiops truncatus	31.79	9.00e-122	431.00
IUUC-Uma-129651	Ustilago maydis	33.89	2.00e-140	493.00
IUUC-Vda-129973	Verticillium dahliae	34.65	2.00e-138	486.00
IUUC-Vpa-130163	Vicugna pacos	30.88	3.00e-56	213.00
IUUC-Vvi-131402	Vitis vinifera	63.60	0.00e+00	1034.00
IUUC-Xtr-132296	Xenopus tropicalis	37.99	2.00e-163	569.00
IUUC-Xma-133028	Xiphophorus maculatus	37.21	2.00e-165	575.00
IUUC-Yli-134484	Yarrowia lipolytica	37.15	5.00e-153	534.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence