iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006716

UUCD1 version

UUC-ArT-00911

Ensembl Protein ID

AT2G27950.2

UniProt Accession

F4IHN6; F4IHN6_ARATH

Genbank Protein ID

AEC08063.1; ANM63239.1; ANM63240.1

Protein Name

Ring/U-Box superfamily protein

Genbank Nucleotide ID

CP002685; CP002685; CP002685

Gene Name

At2g27950; T1E2.13; T1E2_13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G27950	AT2G27950.2	AT2G27950.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	40.00	3.00e-07	55.10	IUUC-Mmu-063122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MAIAGLQNIL VIDSSFRRDS EVQATRQREN EGRSSVRASS LLQMWRELED DHVMGHARER 60
DGERRSVSSP SNTMRGNGCD SNISAHDIVR DSVNLGENEL GGWSPTQSHV GSHNSSEDLG 120

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Nucleotide Sequence
(Fasta)

CCAGACGTTC GTGTTACGGT AAGATTTTCT TCCCGAAGAA GCAGAGAGGT CCACATGTTC 60
CTCCTCTCCA CAATTCACTC TTCTTCTCTT TCGTCTTCTC TTCTGGTTAA ATTCTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009966--P:regulation of signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dse-031509	Dothistroma septosporum	32.73	1.00e-07	51.60
IUUC-Lpe-051170	Leersia perrieri	30.32	2.00e-23	103.00
IUUC-Loc-052099	Lepisosteus oculatus	39.22	8.00e-07	47.40
IUUC-Mtr-057749	Medicago truncatula	43.98	6.00e-145	507.00
IUUC-Mmu-063122	Mus musculus	27.27	7.60e-02	31.60
IUUC-Olo-080683	Oryza longistaminata	28.03	5.00e-22	98.60
IUUC-Oru-084786	Oryza rufipogon	28.45	3.00e-22	99.40
IUUC-Ola-086903	Oryzias latipes	42.31	1.00e-07	50.40
IUUC-Psi-093164	Pelodiscus sinensis	43.14	2.00e-07	48.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence